RNA–Protein interactions for RNA: ENST00000502394.1

MATR3-231, Transcript of matrin 3, human

TSL 4

Gene MATR3, Length 589 nt, Biotype non stop decay, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MATR3-231	ENST00000502394	THSD7B	Q9C0I4	1608 aa		13.77	□□□□□ -0.21
MATR3-231	ENST00000502394	HPSE	Q9Y251	543 aa		13.77	□□□□□ -0.21
MATR3-231	ENST00000502394	UBIAD1	Q9Y5Z9	338 aa		13.77	□□□□□ -0.21
MATR3-231	ENST00000502394	DDX49	Q9Y6V7	483 aa	Known RBP	13.77	□□□□□ -0.21
MATR3-231	ENST00000502394	SOWAHB	A6NEL2	793 aa		13.76	□□□□□ -0.21
MATR3-231	ENST00000502394	MEIS1	O00470	390 aa		13.76	□□□□□ -0.21
MATR3-231	ENST00000502394	CA12	O43570	354 aa		13.76	□□□□□ -0.21
MATR3-231	ENST00000502394	AOC2	O75106	756 aa		13.76	□□□□□ -0.21
MATR3-231	ENST00000502394	UBXN2A	P68543	259 aa		13.76	□□□□□ -0.21
MATR3-231	ENST00000502394	CNTN2	Q02246	1040 aa		13.76	□□□□□ -0.21
MATR3-231	ENST00000502394	CALCRL	Q16602	461 aa		13.76	□□□□□ -0.21
MATR3-231	ENST00000502394	CEP55	Q53EZ4	464 aa		13.76	□□□□□ -0.21
MATR3-231	ENST00000502394	VSIG10L	Q86VR7	867 aa		13.76	□□□□□ -0.21
MATR3-231	ENST00000502394	CCAR1	Q8IX12	1150 aa	Known RBP	13.76	□□□□□ -0.21
MATR3-231	ENST00000502394	ABRA	Q8N0Z2	381 aa		13.76	□□□□□ -0.21
MATR3-231	ENST00000502394	ANKRD35	Q8N283	1001 aa		13.76	□□□□□ -0.21
MATR3-231	ENST00000502394	CYP2W1	Q8TAV3	490 aa		13.76	□□□□□ -0.21
MATR3-231	ENST00000502394	NSUN6	Q8TEA1	469 aa	Known RBP	13.76	□□□□□ -0.21
MATR3-231	ENST00000502394	MRPS27	Q92552	414 aa	Known RBP	13.76	□□□□□ -0.21
MATR3-231	ENST00000502394	MXRA8	Q9BRK3	442 aa		13.76	□□□□□ -0.21
MATR3-231	ENST00000502394	CSRNP2	Q9H175	543 aa		13.76	□□□□□ -0.21
MATR3-231	ENST00000502394	GOLGA6L4	A6NEF3	574 aa		13.75	□□□□□ -0.21
MATR3-231	ENST00000502394	NR3C2	P08235	984 aa		13.75	□□□□□ -0.21
MATR3-231	ENST00000502394	ITGB5	P18084	799 aa		13.75	□□□□□ -0.21
MATR3-231	ENST00000502394	EIF2AK2	P19525	551 aa	Known RBP	13.75	□□□□□ -0.21
MATR3-231	ENST00000502394	LONP1	P36776	959 aa	Known RBP	13.75	□□□□□ -0.21
MATR3-231	ENST00000502394	SNW1	Q13573	536 aa	Known RBP	13.75	□□□□□ -0.21
MATR3-231	ENST00000502394	PRR16	Q569H4	304 aa		13.75	□□□□□ -0.21
MATR3-231	ENST00000502394	ARHGEF16	Q5VV41	709 aa		13.75	□□□□□ -0.21
MATR3-231	ENST00000502394	IGSF22	Q8N9C0	903 aa		13.75	□□□□□ -0.21
MATR3-231	ENST00000502394	FSIP1	Q8NA03	581 aa		13.75	□□□□□ -0.21
MATR3-231	ENST00000502394	IWS1	Q96ST2	819 aa		13.75	□□□□□ -0.21
MATR3-231	ENST00000502394	MMP19	Q99542	508 aa		13.75	□□□□□ -0.21
MATR3-231	ENST00000502394	CFHR5	Q9BXR6	569 aa		13.75	□□□□□ -0.21
MATR3-231	ENST00000502394	ZFYVE28	Q9HCC9	887 aa		13.75	□□□□□ -0.21
MATR3-231	ENST00000502394	CPA4	Q9UI42	421 aa		13.75	□□□□□ -0.21
MATR3-231	ENST00000502394	ZNF236	Q9UL36	1845 aa		13.75	□□□□□ -0.21
MATR3-231	ENST00000502394	LRRC37A2	A6NM11	1700 aa		13.74	□□□□□ -0.21
MATR3-231	ENST00000502394	LOC102724159	A0A0B4J2E5	919 aa		13.74	□□□□□ -0.21
MATR3-231	ENST00000502394	VWA3A	A6NCI4	1184 aa		13.74	□□□□□ -0.21
MATR3-231	ENST00000502394	MSH4	O15457	936 aa		13.74	□□□□□ -0.21
MATR3-231	ENST00000502394	ALDH1A1	P00352	501 aa		13.74	□□□□□ -0.21
MATR3-231	ENST00000502394	FCER1A	P12319	257 aa		13.74	□□□□□ -0.21
MATR3-231	ENST00000502394	PFKFB1	P16118	471 aa		13.74	□□□□□ -0.21
MATR3-231	ENST00000502394	MAPK4	P31152	587 aa		13.74	□□□□□ -0.21
MATR3-231	ENST00000502394	ALDH5A1	P51649	535 aa	Predicted RBP	13.74	□□□□□ -0.21
MATR3-231	ENST00000502394	SET	Q01105	290 aa	Predicted RBP	13.74	□□□□□ -0.21
MATR3-231	ENST00000502394	SPIRE1	Q08AE8	756 aa		13.74	□□□□□ -0.21
MATR3-231	ENST00000502394	CRHR2	Q13324	411 aa		13.74	□□□□□ -0.21
MATR3-231	ENST00000502394	GRB14	Q14449	540 aa		13.74	□□□□□ -0.21
MATR3-231	ENST00000502394	KCTD2	Q14681	263 aa		13.74	□□□□□ -0.21
MATR3-231	ENST00000502394	PWP2	Q15269	919 aa	Known RBP	13.74	□□□□□ -0.21
MATR3-231	ENST00000502394	DTHD1	Q6ZMT9	781 aa		13.74	□□□□□ -0.21
MATR3-231	ENST00000502394	PAXIP1	Q6ZW49	1069 aa	Predicted RBP	13.74	□□□□□ -0.21
MATR3-231	ENST00000502394	USP49	Q70CQ1	688 aa		13.74	□□□□□ -0.21
MATR3-231	ENST00000502394	PLA2G4D	Q86XP0	818 aa		13.74	□□□□□ -0.21
MATR3-231	ENST00000502394	FMR1NB	Q8N0W7	255 aa	Predicted RBP	13.74	□□□□□ -0.21
MATR3-231	ENST00000502394	MORC4	Q8TE76	937 aa		13.74	□□□□□ -0.21
MATR3-231	ENST00000502394	FAM20A	Q96MK3	541 aa		13.74	□□□□□ -0.21
MATR3-231	ENST00000502394	INPP4A	Q96PE3	977 aa	Predicted RBP	13.74	□□□□□ -0.21
MATR3-231	ENST00000502394	JADE2	Q9NQC1	790 aa		13.74	□□□□□ -0.21
MATR3-231	ENST00000502394		A0A1B0GVL5	298 aa		13.73	□□□□□ -0.21
MATR3-231	ENST00000502394	STRN	O43815	780 aa		13.73	□□□□□ -0.21
MATR3-231	ENST00000502394	NR1I2	O75469	434 aa		13.73	□□□□□ -0.21
MATR3-231	ENST00000502394	STAM2	O75886	525 aa		13.73	□□□□□ -0.21
MATR3-231	ENST00000502394	RGS20	O76081	388 aa		13.73	□□□□□ -0.21
MATR3-231	ENST00000502394	AR	P10275	920 aa		13.73	□□□□□ -0.21
MATR3-231	ENST00000502394	CCND2	P30279	289 aa		13.73	□□□□□ -0.21
MATR3-231	ENST00000502394	ZNF76	P36508	570 aa		13.73	□□□□□ -0.21
MATR3-231	ENST00000502394	NDUFA8	P51970	172 aa		13.73	□□□□□ -0.21
MATR3-231	ENST00000502394	FAM160A1	Q05DH4	1040 aa		13.73	□□□□□ -0.21
MATR3-231	ENST00000502394	SEMA3F	Q13275	785 aa		13.73	□□□□□ -0.21
MATR3-231	ENST00000502394	PDIA5	Q14554	519 aa		13.73	□□□□□ -0.21
MATR3-231	ENST00000502394	ZNF792	Q3KQV3	632 aa		13.73	□□□□□ -0.21
MATR3-231	ENST00000502394	SPECC1	Q5M775	1068 aa		13.73	□□□□□ -0.21
MATR3-231	ENST00000502394	B3GNT9	Q6UX72	402 aa		13.73	□□□□□ -0.21
MATR3-231	ENST00000502394	GPR142	Q7Z601	462 aa		13.73	□□□□□ -0.21
MATR3-231	ENST00000502394	SLFN12	Q8IYM2	578 aa		13.73	□□□□□ -0.21
MATR3-231	ENST00000502394	SLC5A5	Q92911	643 aa		13.73	□□□□□ -0.21
MATR3-231	ENST00000502394	AK8	Q96MA6	479 aa		13.73	□□□□□ -0.21
MATR3-231	ENST00000502394	TMEM63C	Q9P1W3	806 aa		13.73	□□□□□ -0.21
MATR3-231	ENST00000502394	ADD3	Q9UEY8	706 aa	Known RBP	13.73	□□□□□ -0.21
MATR3-231	ENST00000502394	PLXNB2	O15031	1838 aa		13.73	□□□□□ -0.21
MATR3-231	ENST00000502394		A0A087X0B3	334 aa		13.72	□□□□□ -0.21
MATR3-231	ENST00000502394	COBL	O75128	1261 aa		13.72	□□□□□ -0.21
MATR3-231	ENST00000502394	PSMD10	O75832	226 aa		13.72	□□□□□ -0.21
MATR3-231	ENST00000502394	PGK2	P07205	417 aa		13.72	□□□□□ -0.21
MATR3-231	ENST00000502394	ADORA2A	P29274	412 aa		13.72	□□□□□ -0.21
MATR3-231	ENST00000502394	MAP2K2	P36507	400 aa		13.72	□□□□□ -0.21
MATR3-231	ENST00000502394	TXK	P42681	527 aa		13.72	□□□□□ -0.21
MATR3-231	ENST00000502394	VEGFB	P49765	207 aa		13.72	□□□□□ -0.21
MATR3-231	ENST00000502394	GRM1	Q13255	1194 aa		13.72	□□□□□ -0.21
MATR3-231	ENST00000502394	CCDC73	Q6ZRK6	1079 aa		13.72	□□□□□ -0.21
MATR3-231	ENST00000502394	PLEKHH3	Q7Z736	793 aa		13.72	□□□□□ -0.21
MATR3-231	ENST00000502394	SYMPK	Q92797	1274 aa	Known RBP	13.72	□□□□□ -0.21
MATR3-231	ENST00000502394	GJA10	Q969M2	543 aa		13.72	□□□□□ -0.21
MATR3-231	ENST00000502394	GPRASP2	Q96D09	838 aa		13.72	□□□□□ -0.21
MATR3-231	ENST00000502394	EPSTI1	Q96J88	318 aa		13.72	□□□□□ -0.21
MATR3-231	ENST00000502394	MMTAG2	Q9BU76	263 aa	Known RBP	13.72	□□□□□ -0.21
MATR3-231	ENST00000502394	WDR11	Q9BZH6	1224 aa		13.72	□□□□□ -0.21

Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms