RNA–Protein interactions for RNA: ENST00000498698.1

HMGCL-207, Transcript of 3-hydroxy-3-methylglutaryl-CoA lyase, humanhuman

TSL 3

Gene HMGCL, Length 463 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCL-207ENST00000498698 SPATA33Q96N06 139 aa10.92□□□□□ -0.66
HMGCL-207ENST00000498698 BCAS3Q9H6U6 928 aa10.92□□□□□ -0.66
HMGCL-207ENST00000498698 BRPF3Q9ULD4 1205 aa10.92□□□□□ -0.66
HMGCL-207ENST00000498698 SORBS3O60504 671 aa10.91□□□□□ -0.66
HMGCL-207ENST00000498698 PFKMP08237 780 aa10.91□□□□□ -0.66
HMGCL-207ENST00000498698 IQCF3P0C7M6 154 aa10.91□□□□□ -0.66
HMGCL-207ENST00000498698 ZNF286BP0CG31 522 aa10.91□□□□□ -0.66
HMGCL-207ENST00000498698 PBX2P40425 430 aa10.91□□□□□ -0.66
HMGCL-207ENST00000498698 BFSP2Q13515 415 aa10.91□□□□□ -0.66
HMGCL-207ENST00000498698 KRT32Q14532 448 aa10.91□□□□□ -0.66
HMGCL-207ENST00000498698 MFSD10Q14728 455 aa10.91□□□□□ -0.66
HMGCL-207ENST00000498698 PTGISQ16647 500 aa10.91□□□□□ -0.66
HMGCL-207ENST00000498698 GNPTABQ3T906 1256 aa10.91□□□□□ -0.66
HMGCL-207ENST00000498698 PCNX4Q63HM2 1172 aa10.91□□□□□ -0.66
HMGCL-207ENST00000498698 XRRA1Q6P2D8 792 aa10.91□□□□□ -0.66
HMGCL-207ENST00000498698 SYNE3Q6ZMZ3 975 aa10.91□□□□□ -0.66
HMGCL-207ENST00000498698 RETREG2Q8NC44 543 aa10.91□□□□□ -0.66
HMGCL-207ENST00000498698 CUL5Q93034 780 aa10.91□□□□□ -0.66
HMGCL-207ENST00000498698 TIFAQ96CG3 184 aa10.91□□□□□ -0.66
HMGCL-207ENST00000498698 C16orf70Q9BSU1 422 aa10.91□□□□□ -0.66
HMGCL-207ENST00000498698 PBX4Q9BYU1 374 aa10.91□□□□□ -0.66
HMGCL-207ENST00000498698 MTIF3Q9H2K0 278 aaKnown RBP10.91□□□□□ -0.66
HMGCL-207ENST00000498698 PSTPIP2Q9H939 334 aa10.91□□□□□ -0.66
HMGCL-207ENST00000498698 MLXIPQ9HAP2 919 aa10.91□□□□□ -0.66
HMGCL-207ENST00000498698 RTEL1Q9NZ71 1219 aa10.91□□□□□ -0.66
HMGCL-207ENST00000498698 HDAC6Q9UBN7 1215 aa10.91□□□□□ -0.66
HMGCL-207ENST00000498698 GTF2IRD1Q9UHL9 959 aa10.91□□□□□ -0.66
HMGCL-207ENST00000498698 NOD1Q9Y239 953 aa10.91□□□□□ -0.66
HMGCL-207ENST00000498698 ZBTB43O43298 467 aa10.9□□□□□ -0.66
HMGCL-207ENST00000498698 FIBPO43427 364 aa10.9□□□□□ -0.66
HMGCL-207ENST00000498698 HMGB1P09429 215 aaKnown RBP10.9□□□□□ -0.66
HMGCL-207ENST00000498698 RFC2P35250 354 aa10.9□□□□□ -0.66
HMGCL-207ENST00000498698 RBL2Q08999 1139 aa10.9□□□□□ -0.66
HMGCL-207ENST00000498698 GRIN2CQ14957 1233 aa10.9□□□□□ -0.66
HMGCL-207ENST00000498698 KIAA0753Q2KHM9 967 aa10.9□□□□□ -0.66
HMGCL-207ENST00000498698 DEFB128Q7Z7B8 93 aa10.9□□□□□ -0.66
HMGCL-207ENST00000498698 C7orf31Q8N865 590 aa10.9□□□□□ -0.66
HMGCL-207ENST00000498698 MYLIPQ8WY64 445 aa10.9□□□□□ -0.66
HMGCL-207ENST00000498698 DHX38Q92620 1227 aaKnown RBP10.9□□□□□ -0.66
HMGCL-207ENST00000498698 ALG1Q9BT22 464 aa10.9□□□□□ -0.66
HMGCL-207ENST00000498698 KATNAL1Q9BW62 490 aa10.9□□□□□ -0.66
HMGCL-207ENST00000498698 ZNF576Q9H609 170 aa10.9□□□□□ -0.66
HMGCL-207ENST00000498698 FAM217BQ9NTX9 383 aaPredicted RBP10.9□□□□□ -0.66
HMGCL-207ENST00000498698 RBM28Q9NW13 759 aaKnown RBP10.9□□□□□ -0.66
HMGCL-207ENST00000498698 LAMA2P24043 3122 aaKnown RBP10.89□□□□□ -0.67
HMGCL-207ENST00000498698 CPA1P15085 419 aa10.89□□□□□ -0.67
HMGCL-207ENST00000498698 HSPA4P34932 840 aa10.89□□□□□ -0.67
HMGCL-207ENST00000498698 RCAN1P53805 252 aa10.89□□□□□ -0.67
HMGCL-207ENST00000498698 ZNF200P98182 395 aaPredicted RBP10.89□□□□□ -0.67
HMGCL-207ENST00000498698 NEDD9Q14511 834 aa10.89□□□□□ -0.67
HMGCL-207ENST00000498698 HIC1Q14526 733 aa10.89□□□□□ -0.67
HMGCL-207ENST00000498698 GPNMBQ14956 572 aa10.89□□□□□ -0.67
HMGCL-207ENST00000498698 UBE2SQ16763 222 aa10.89□□□□□ -0.67
HMGCL-207ENST00000498698 RTN1Q16799 776 aa10.89□□□□□ -0.67
HMGCL-207ENST00000498698 TYW1BQ6NUM6 668 aa10.89□□□□□ -0.67
HMGCL-207ENST00000498698 METTL7BQ6UX53 244 aa10.89□□□□□ -0.67
HMGCL-207ENST00000498698 HEATR3Q7Z4Q2 680 aa10.89□□□□□ -0.67
HMGCL-207ENST00000498698 CAGE1Q8TC20 777 aa10.89□□□□□ -0.67
HMGCL-207ENST00000498698 SENP7Q9BQF6 1050 aa10.89□□□□□ -0.67
HMGCL-207ENST00000498698 TELO2Q9Y4R8 837 aa10.89□□□□□ -0.67
HMGCL-207ENST00000498698 SNX14Q9Y5W7 946 aa10.89□□□□□ -0.67
HMGCL-207ENST00000498698 SLC4A7Q9Y6M7 1214 aa10.89□□□□□ -0.67
HMGCL-207ENST00000498698 V9GY48 417 aaPredicted RBP10.89□□□□□ -0.67
HMGCL-207ENST00000498698 CNTNAP5Q8WYK1 1306 aa10.88□□□□□ -0.67
HMGCL-207ENST00000498698 KLF18A0A0U1RQI7 1052 aa10.88□□□□□ -0.67
HMGCL-207ENST00000498698 H3BRB1 525 aa10.88□□□□□ -0.67
HMGCL-207ENST00000498698 LGALS2P05162 132 aa10.88□□□□□ -0.67
HMGCL-207ENST00000498698 SELPP16109 830 aa10.88□□□□□ -0.67
HMGCL-207ENST00000498698 ITGB5P18084 799 aa10.88□□□□□ -0.67
HMGCL-207ENST00000498698 CDC27P30260 824 aa10.88□□□□□ -0.67
HMGCL-207ENST00000498698 HOXC8P31273 242 aa10.88□□□□□ -0.67
HMGCL-207ENST00000498698 PTK7Q13308 1070 aa10.88□□□□□ -0.67
HMGCL-207ENST00000498698 RAB30Q15771 203 aa10.88□□□□□ -0.67
HMGCL-207ENST00000498698 TRIM71Q2Q1W2 868 aaKnown RBP10.88□□□□□ -0.67
HMGCL-207ENST00000498698 WWC2Q6AWC2 1192 aa10.88□□□□□ -0.67
HMGCL-207ENST00000498698 CYFIP1Q7L576 1253 aa10.88□□□□□ -0.67
HMGCL-207ENST00000498698 NLRX1Q86UT6 975 aa10.88□□□□□ -0.67
HMGCL-207ENST00000498698 CCDC155Q8N6L0 562 aa10.88□□□□□ -0.67
HMGCL-207ENST00000498698 AFAP1L1Q8TED9 768 aa10.88□□□□□ -0.67
HMGCL-207ENST00000498698 GPRASP2Q96D09 838 aa10.88□□□□□ -0.67
HMGCL-207ENST00000498698 JAKMIP1Q96N16 626 aaKnown RBP10.88□□□□□ -0.67
HMGCL-207ENST00000498698 GPR20Q99678 358 aa10.88□□□□□ -0.67
HMGCL-207ENST00000498698 USP26Q9BXU7 913 aa10.88□□□□□ -0.67
HMGCL-207ENST00000498698 TUT1Q9H6E5 874 aaKnown RBP10.88□□□□□ -0.67
HMGCL-207ENST00000498698 MSRAQ9UJ68 235 aa10.88□□□□□ -0.67
HMGCL-207ENST00000498698 PCDHA6Q9UN73 950 aa10.88□□□□□ -0.67
HMGCL-207ENST00000498698 YBX2Q9Y2T7 364 aaKnown RBP10.88□□□□□ -0.67
HMGCL-207ENST00000498698 PCDHA8Q9Y5H6 950 aa10.88□□□□□ -0.67
HMGCL-207ENST00000498698 UBIAD1Q9Y5Z9 338 aa10.88□□□□□ -0.67
HMGCL-207ENST00000498698 SCN10AQ9Y5Y9 1956 aa10.88□□□□□ -0.67
HMGCL-207ENST00000498698 GOLGA8AA7E2F4 631 aa10.87□□□□□ -0.67
HMGCL-207ENST00000498698 GOLGA8BA8MQT2 603 aa10.87□□□□□ -0.67
HMGCL-207ENST00000498698 ZBBXA8MT70 800 aa10.87□□□□□ -0.67
HMGCL-207ENST00000498698 NOP56O00567 594 aaKnown RBP10.87□□□□□ -0.67
HMGCL-207ENST00000498698 ATP9AO75110 1047 aa10.87□□□□□ -0.67
HMGCL-207ENST00000498698 CKBP12277 381 aa10.87□□□□□ -0.67
HMGCL-207ENST00000498698 ACTN1P12814 892 aa10.87□□□□□ -0.67
HMGCL-207ENST00000498698 FOSL2P15408 326 aa10.87□□□□□ -0.67
HMGCL-207ENST00000498698 KCNA2P16389 499 aa10.87□□□□□ -0.67
HMGCL-207ENST00000498698 ATP2A2P16615 1042 aaKnown RBP10.87□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms