RNA–Protein interactions for RNA: ENST00000498328.1

USP33-210, Transcript of ubiquitin specific peptidase 33, humanhuman

TSL 2

Gene USP33, Length 625 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP33-210ENST00000498328 CGGBP1Q9UFW8 167 aaPredicted RBP4.24□□□□□ -1.73
USP33-210ENST00000498328 FBXO21O94952 628 aa4.23□□□□□ -1.73
USP33-210ENST00000498328 NAT2P11245 290 aa4.23□□□□□ -1.73
USP33-210ENST00000498328 DPY19L2P1Q6NXN4 242 aa4.23□□□□□ -1.73
USP33-210ENST00000498328 RIOX2Q8IUF8 465 aa4.23□□□□□ -1.73
USP33-210ENST00000498328 PLEKHO2Q8TD55 490 aa4.23□□□□□ -1.73
USP33-210ENST00000498328 MBD6Q96DN6 1003 aa4.23□□□□□ -1.73
USP33-210ENST00000498328 FAM89AQ96GI7 184 aa4.23□□□□□ -1.73
USP33-210ENST00000498328 WWC2-AS2Q96NR7 200 aa4.23□□□□□ -1.73
USP33-210ENST00000498328 SYT3Q9BQG1 590 aa4.23□□□□□ -1.73
USP33-210ENST00000498328 DTLQ9NZJ0 730 aa4.23□□□□□ -1.73
USP33-210ENST00000498328 CLEC1BQ9P126 229 aa4.23□□□□□ -1.73
USP33-210ENST00000498328 HGSO14964 777 aaPredicted RBP4.22□□□□□ -1.73
USP33-210ENST00000498328 SLC7A5Q01650 507 aa4.22□□□□□ -1.73
USP33-210ENST00000498328 ZNF503Q96F45 646 aa4.22□□□□□ -1.73
USP33-210ENST00000498328 MMP19Q99542 508 aa4.22□□□□□ -1.73
USP33-210ENST00000498328 MEGF9Q9H1U4 602 aa4.22□□□□□ -1.73
USP33-210ENST00000498328 ZNF652Q9Y2D9 606 aa4.22□□□□□ -1.73
USP33-210ENST00000498328 PCDHB4Q9Y5E5 795 aa4.22□□□□□ -1.73
USP33-210ENST00000498328 NOP56O00567 594 aaKnown RBP4.21□□□□□ -1.74
USP33-210ENST00000498328 CBFA2T2O43439 604 aa4.21□□□□□ -1.74
USP33-210ENST00000498328 PPP1R11O60927 126 aaPredicted RBP4.21□□□□□ -1.74
USP33-210ENST00000498328 PLS3P13797 630 aa4.21□□□□□ -1.74
USP33-210ENST00000498328 MAKP20794 623 aa4.21□□□□□ -1.74
USP33-210ENST00000498328 CR1LQ2VPA4 569 aa4.21□□□□□ -1.74
USP33-210ENST00000498328 SND1Q7KZF4 910 aaKnown RBP eCLIP4.21□□□□□ -1.74
USP33-210ENST00000498328 EDAQ92838 391 aa4.21□□□□□ -1.74
USP33-210ENST00000498328 TMEM169Q96HH4 297 aa4.21□□□□□ -1.74
USP33-210ENST00000498328 RCC1LQ96I51 464 aaKnown RBP4.21□□□□□ -1.74
USP33-210ENST00000498328 PLEKHG4BQ96PX9 1271 aa4.21□□□□□ -1.74
USP33-210ENST00000498328 PTPN18Q99952 460 aa4.21□□□□□ -1.74
USP33-210ENST00000498328 MCMBPQ9BTE3 642 aa4.21□□□□□ -1.74
USP33-210ENST00000498328 ADAM29Q9UKF5 820 aa4.21□□□□□ -1.74
USP33-210ENST00000498328 TIMM13Q9Y5L4 95 aaPredicted RBP4.21□□□□□ -1.74
USP33-210ENST00000498328 CHGBP05060 677 aa4.2□□□□□ -1.74
USP33-210ENST00000498328 EPHX1P07099 455 aa4.2□□□□□ -1.74
USP33-210ENST00000498328 MLLT6P55198 1093 aaPredicted RBP4.2□□□□□ -1.74
USP33-210ENST00000498328 RAC3P60763 192 aa4.2□□□□□ -1.74
USP33-210ENST00000498328 VASNQ6EMK4 673 aa4.2□□□□□ -1.74
USP33-210ENST00000498328 TCTN3Q6NUS6 607 aa4.2□□□□□ -1.74
USP33-210ENST00000498328 CEP68Q76N32 757 aa4.2□□□□□ -1.74
USP33-210ENST00000498328 MRGPRGQ86SM5 289 aa4.2□□□□□ -1.74
USP33-210ENST00000498328 C1orf210Q8IVY1 113 aa4.2□□□□□ -1.74
USP33-210ENST00000498328 ARHGEF39Q8N4T4 335 aa4.2□□□□□ -1.74
USP33-210ENST00000498328 ZCCHC14Q8WYQ9 949 aaKnown RBP4.2□□□□□ -1.74
USP33-210ENST00000498328 NAF1Q96HR8 494 aaKnown RBP4.2□□□□□ -1.74
USP33-210ENST00000498328 CHAMP1Q96JM3 812 aa4.2□□□□□ -1.74
USP33-210ENST00000498328 FGD4Q96M96 766 aa4.2□□□□□ -1.74
USP33-210ENST00000498328 GNRHR2Q96P88 292 aa4.2□□□□□ -1.74
USP33-210ENST00000498328 KLHL25Q9H0H3 589 aa4.2□□□□□ -1.74
USP33-210ENST00000498328 TMEFF2Q9UIK5 374 aaPredicted RBP4.2□□□□□ -1.74
USP33-210ENST00000498328 TIMELESSQ9UNS1 1208 aa4.2□□□□□ -1.74
USP33-210ENST00000498328 AKT3Q9Y243 479 aa4.2□□□□□ -1.74
USP33-210ENST00000498328 NARSO43776 548 aaKnown RBP4.19□□□□□ -1.74
USP33-210ENST00000498328 DGKIO75912 1065 aa4.19□□□□□ -1.74
USP33-210ENST00000498328 KCNH1O95259 989 aa4.19□□□□□ -1.74
USP33-210ENST00000498328 ERCC3P19447 782 aa4.19□□□□□ -1.74
USP33-210ENST00000498328 HHEXQ03014 270 aa4.19□□□□□ -1.74
USP33-210ENST00000498328 SCRN1Q12765 414 aa4.19□□□□□ -1.74
USP33-210ENST00000498328 HNRNPA0Q13151 305 aaKnown RBP4.19□□□□□ -1.74
USP33-210ENST00000498328 ZYXQ15942 572 aaKnown RBP4.19□□□□□ -1.74
USP33-210ENST00000498328 STEAP3Q658P3 488 aa4.19□□□□□ -1.74
USP33-210ENST00000498328 TEPPQ6URK8 271 aa4.19□□□□□ -1.74
USP33-210ENST00000498328 TMC5Q6UXY8 1006 aa4.19□□□□□ -1.74
USP33-210ENST00000498328 TAX1BP1Q86VP1 789 aa4.19□□□□□ -1.74
USP33-210ENST00000498328 REXO2Q9Y3B8 237 aaKnown RBP4.19□□□□□ -1.74
USP33-210ENST00000498328 SLC4A7Q9Y6M7 1214 aa4.19□□□□□ -1.74
USP33-210ENST00000498328 FOXS1O43638 330 aa4.18□□□□□ -1.74
USP33-210ENST00000498328 RAMP2O60895 175 aa4.18□□□□□ -1.74
USP33-210ENST00000498328 CNOT4O95628 575 aaKnown RBP4.18□□□□□ -1.74
USP33-210ENST00000498328 ACO1P21399 889 aaKnown RBP4.18□□□□□ -1.74
USP33-210ENST00000498328 FPR2P25090 351 aa4.18□□□□□ -1.74
USP33-210ENST00000498328 DNAJA1P31689 397 aaKnown RBP4.18□□□□□ -1.74
USP33-210ENST00000498328 KCNAB2Q13303 367 aa4.18□□□□□ -1.74
USP33-210ENST00000498328 SMAD2Q15796 467 aaKnown RBP4.18□□□□□ -1.74
USP33-210ENST00000498328 CSRP2Q16527 193 aa4.18□□□□□ -1.74
USP33-210ENST00000498328 Q6ZUG5 572 aa4.18□□□□□ -1.74
USP33-210ENST00000498328 ERICH6Q7L0X2 663 aa4.18□□□□□ -1.74
USP33-210ENST00000498328 POLNQ7Z5Q5 900 aa4.18□□□□□ -1.74
USP33-210ENST00000498328 TRIM48Q8IWZ4 208 aa4.18□□□□□ -1.74
USP33-210ENST00000498328 REXO1L1PQ8IX06 675 aa4.18□□□□□ -1.74
USP33-210ENST00000498328 RBBP8NLQ8NC74 664 aaPredicted RBP4.18□□□□□ -1.74
USP33-210ENST00000498328 PHOSPHO1Q8TCT1 267 aa4.18□□□□□ -1.74
USP33-210ENST00000498328 ZNF483Q8TF39 744 aaPredicted RBP4.18□□□□□ -1.74
USP33-210ENST00000498328 EXTL1Q92935 676 aa4.18□□□□□ -1.74
USP33-210ENST00000498328 PPP1R14AQ96A00 147 aa4.18□□□□□ -1.74
USP33-210ENST00000498328 PRRX2Q99811 253 aa4.18□□□□□ -1.74
USP33-210ENST00000498328 AURKAIP1Q9NWT8 199 aaPredicted RBP4.18□□□□□ -1.74
USP33-210ENST00000498328 NUB1Q9Y5A7 615 aa4.18□□□□□ -1.74
USP33-210ENST00000498328 ANKRD34BA5PLL1 514 aa4.17□□□□□ -1.74
USP33-210ENST00000498328 KRIT1O00522 736 aa4.17□□□□□ -1.74
USP33-210ENST00000498328 ZC3H6P61129 1189 aaKnown RBP4.17□□□□□ -1.74
USP33-210ENST00000498328 TUBA3CQ13748 450 aa4.17□□□□□ -1.74
USP33-210ENST00000498328 E4F1Q66K89 784 aaPredicted RBP4.17□□□□□ -1.74
USP33-210ENST00000498328 TUBA3EQ6PEY2 450 aa4.17□□□□□ -1.74
USP33-210ENST00000498328 FBXO33Q7Z6M2 555 aa4.17□□□□□ -1.74
USP33-210ENST00000498328 NEIL1Q96FI4 390 aaPredicted RBP4.17□□□□□ -1.74
USP33-210ENST00000498328 GPRC5CQ9NQ84 441 aa4.17□□□□□ -1.74
USP33-210ENST00000498328 DLL4Q9NR61 685 aa4.17□□□□□ -1.74
USP33-210ENST00000498328 MYOTQ9UBF9 498 aa4.17□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms