RNA–Protein interactions for RNA: ENST00000498328.1

USP33-210, Transcript of ubiquitin specific peptidase 33, humanhuman

TSL 2

Gene USP33, Length 625 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP33-210ENST00000498328 AEBP2Q6ZN18 517 aaPredicted RBP21.11■□□□□ 0.97
USP33-210ENST00000498328 CHIC1Q5VXU3 224 aa19.54■□□□□ 0.72
USP33-210ENST00000498328 SENP3Q9H4L4 574 aaPredicted RBP18.03■□□□□ 0.48
USP33-210ENST00000498328 PHF23Q9BUL5 403 aaPredicted RBP17.69■□□□□ 0.42
USP33-210ENST00000498328 POTEDQ86YR6 584 aa17.68■□□□□ 0.42
USP33-210ENST00000498328 FOXD1Q16676 465 aa17.01■□□□□ 0.31
USP33-210ENST00000498328 MSH5O43196 834 aa16.22■□□□□ 0.19
USP33-210ENST00000498328 PIAS4Q8N2W9 510 aaPredicted RBP15.55■□□□□ 0.08
USP33-210ENST00000498328 PLPPR3Q6T4P5 718 aa15.34■□□□□ 0.05
USP33-210ENST00000498328 PPP6R1Q9UPN7 881 aa15.16■□□□□ 0.02
USP33-210ENST00000498328 ADRA2BP18089 450 aa14.98□□□□□ -0.01
USP33-210ENST00000498328 CACNB1Q02641 598 aaPredicted RBP14.52□□□□□ -0.09
USP33-210ENST00000498328 DMRT2Q9Y5R5 561 aa14.19□□□□□ -0.14
USP33-210ENST00000498328 MAPK8IP2Q13387 824 aaPredicted RBP14.1□□□□□ -0.15
USP33-210ENST00000498328 SCAF1Q9H7N4 1312 aaKnown RBP13.96□□□□□ -0.17
USP33-210ENST00000498328 RNF39Q9H2S5 420 aa13.83□□□□□ -0.2
USP33-210ENST00000498328 POTEHQ6S545 545 aa13.61□□□□□ -0.23
USP33-210ENST00000498328 DCAF8L1A6NGE4 600 aa13.5□□□□□ -0.25
USP33-210ENST00000498328 C1QBPQ07021 282 aaKnown RBP13.5□□□□□ -0.25
USP33-210ENST00000498328 PPP4R3CPQ6ZMV5 832 aa13.33□□□□□ -0.28
USP33-210ENST00000498328 HOXD11P31277 338 aaPredicted RBP13.29□□□□□ -0.28
USP33-210ENST00000498328 CNKSR2Q8WXI2 1034 aa13.2□□□□□ -0.3
USP33-210ENST00000498328 RNF216Q9NWF9 866 aaPredicted RBP13.11□□□□□ -0.31
USP33-210ENST00000498328 DNAJC5BQ9UF47 199 aa13.03□□□□□ -0.32
USP33-210ENST00000498328 NCBP3Q53F19 620 aaKnown RBP12.94□□□□□ -0.34
USP33-210ENST00000498328 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.75□□□□□ -0.37
USP33-210ENST00000498328 DSG3P32926 999 aa12.59□□□□□ -0.39
USP33-210ENST00000498328 NPM3O75607 178 aaKnown RBP12.52□□□□□ -0.41
USP33-210ENST00000498328 SPINK5Q9NQ38 1064 aaPredicted RBP12.39□□□□□ -0.43
USP33-210ENST00000498328 CAPN15O75808 1086 aa12.32□□□□□ -0.44
USP33-210ENST00000498328 SP7Q8TDD2 431 aaPredicted RBP12.27□□□□□ -0.45
USP33-210ENST00000498328 U3KPZ7 1027 aaPredicted RBP12.27□□□□□ -0.45
USP33-210ENST00000498328 APLP2Q06481 763 aa12.25□□□□□ -0.45
USP33-210ENST00000498328 CHRDL2Q6WN34 429 aa12.13□□□□□ -0.47
USP33-210ENST00000498328 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.12□□□□□ -0.47
USP33-210ENST00000498328 HNRNPUL2Q1KMD3 747 aaKnown RBP12.12□□□□□ -0.47
USP33-210ENST00000498328 ZNF219Q9P2Y4 722 aaPredicted RBP12.08□□□□□ -0.48
USP33-210ENST00000498328 KCNA4P22459 653 aa12.06□□□□□ -0.48
USP33-210ENST00000498328 TRHP20396 242 aaPredicted RBP12.04□□□□□ -0.48
USP33-210ENST00000498328 SAMD1Q6SPF0 538 aaPredicted RBP11.98□□□□□ -0.49
USP33-210ENST00000498328 ABCB7O75027 752 aa11.97□□□□□ -0.49
USP33-210ENST00000498328 SLC4A2P04920 1241 aa11.93□□□□□ -0.5
USP33-210ENST00000498328 RBM42Q9BTD8 480 aaKnown RBP11.92□□□□□ -0.5
USP33-210ENST00000498328 MYCNP04198 464 aaPredicted RBP11.72□□□□□ -0.53
USP33-210ENST00000498328 PIP4P2Q8N4L2 257 aa11.66□□□□□ -0.54
USP33-210ENST00000498328 HAX1O00165 279 aa11.63□□□□□ -0.55
USP33-210ENST00000498328 POLA2Q14181 598 aa11.61□□□□□ -0.55
USP33-210ENST00000498328 EVX2Q03828 476 aa11.57□□□□□ -0.56
USP33-210ENST00000498328 ZBTB12Q9Y330 459 aaPredicted RBP11.54□□□□□ -0.56
USP33-210ENST00000498328 PLSCR2Q9NRY7 297 aa11.53□□□□□ -0.56
USP33-210ENST00000498328 AKT1S1Q96B36 256 aa11.49□□□□□ -0.57
USP33-210ENST00000498328 SLC4A1APQ9BWU0 796 aaKnown RBP11.48□□□□□ -0.57
USP33-210ENST00000498328 LHX8Q68G74 356 aa11.47□□□□□ -0.57
USP33-210ENST00000498328 FXR2P51116 673 aaKnown RBP eCLIP11.45□□□□□ -0.58
USP33-210ENST00000498328 FOXD4L1Q9NU39 408 aa11.45□□□□□ -0.58
USP33-210ENST00000498328 REM2Q8IYK8 340 aaPredicted RBP11.41□□□□□ -0.58
USP33-210ENST00000498328 PITPNM1O00562 1244 aa11.31□□□□□ -0.6
USP33-210ENST00000498328 OSCARQ8IYS5 282 aa11.25□□□□□ -0.61
USP33-210ENST00000498328 ATF5Q9Y2D1 282 aaPredicted RBP11.23□□□□□ -0.61
USP33-210ENST00000498328 GABBR2O75899 941 aa11.18□□□□□ -0.62
USP33-210ENST00000498328 FBLN2P98095 1184 aa11.15□□□□□ -0.62
USP33-210ENST00000498328 ATXN8OSP0DMR3 200 aa11.14□□□□□ -0.63
USP33-210ENST00000498328 C19orf67A6NJJ6 358 aa11.11□□□□□ -0.63
USP33-210ENST00000498328 SPDYE2BA6NHP3 402 aa11.06□□□□□ -0.64
USP33-210ENST00000498328 SPDYE6P0CI01 402 aa11.06□□□□□ -0.64
USP33-210ENST00000498328 SPDYE2Q495Y8 402 aa11.06□□□□□ -0.64
USP33-210ENST00000498328 POTEIP0CG38 1075 aa11.03□□□□□ -0.64
USP33-210ENST00000498328 ZBTB22O15209 634 aa10.98□□□□□ -0.65
USP33-210ENST00000498328 PRKAR2AP13861 404 aaKnown RBP10.96□□□□□ -0.65
USP33-210ENST00000498328 SPDYE1Q8NFV5 336 aaPredicted RBP10.96□□□□□ -0.65
USP33-210ENST00000498328 CLEC11AQ9Y240 323 aa10.94□□□□□ -0.66
USP33-210ENST00000498328 ZNF692Q9BU19 519 aaPredicted RBP10.9□□□□□ -0.66
USP33-210ENST00000498328 POTEMA6NI47 508 aa10.86□□□□□ -0.67
USP33-210ENST00000498328 POTEGQ6S5H5 508 aa10.79□□□□□ -0.68
USP33-210ENST00000498328 SSUH2Q9Y2M2 353 aa10.77□□□□□ -0.69
USP33-210ENST00000498328 OTUD5Q96G74 571 aa10.76□□□□□ -0.69
USP33-210ENST00000498328 PRR29P0C7W0 189 aa10.74□□□□□ -0.69
USP33-210ENST00000498328 MKRN4PQ13434 485 aaPredicted RBP10.72□□□□□ -0.69
USP33-210ENST00000498328 PCDH10Q9P2E7 1040 aa10.7□□□□□ -0.7
USP33-210ENST00000498328 PABPN1Q86U42 306 aaKnown RBP eCLIP10.68□□□□□ -0.7
USP33-210ENST00000498328 CHADLQ6NUI6 762 aa10.65□□□□□ -0.7
USP33-210ENST00000498328 POTEB2H3BUK9 544 aa10.64□□□□□ -0.71
USP33-210ENST00000498328 CLCN6P51797 869 aa10.58□□□□□ -0.72
USP33-210ENST00000498328 DCBLD2Q96PD2 775 aa10.55□□□□□ -0.72
USP33-210ENST00000498328 CD44P16070 742 aaKnown RBP10.54□□□□□ -0.72
USP33-210ENST00000498328 LCE2DQ5TA82 110 aaPredicted RBP10.51□□□□□ -0.73
USP33-210ENST00000498328 FARP1Q9Y4F1 1045 aaPredicted RBP10.5□□□□□ -0.73
USP33-210ENST00000498328 STAG3Q9UJ98 1225 aa10.48□□□□□ -0.73
USP33-210ENST00000498328 PAK3O75914 559 aaPredicted RBP10.39□□□□□ -0.75
USP33-210ENST00000498328 ZNF579Q8NAF0 562 aaKnown RBP10.38□□□□□ -0.75
USP33-210ENST00000498328 ZRANB1Q9UGI0 708 aa10.35□□□□□ -0.75
USP33-210ENST00000498328 GALR2O43603 387 aaPredicted RBP10.33□□□□□ -0.76
USP33-210ENST00000498328 POTEJP0CG39 1038 aa10.33□□□□□ -0.76
USP33-210ENST00000498328 CSRNP3Q8WYN3 585 aa10.33□□□□□ -0.76
USP33-210ENST00000498328 SPDYE4A6NLX3 237 aa10.29□□□□□ -0.76
USP33-210ENST00000498328 NPM1P06748 294 aaKnown RBP eCLIP10.29□□□□□ -0.76
USP33-210ENST00000498328 PELP1Q8IZL8 1130 aaKnown RBP10.28□□□□□ -0.76
USP33-210ENST00000498328 CREBZFQ9NS37 354 aa10.25□□□□□ -0.77
USP33-210ENST00000498328 EHMT2Q96KQ7 1210 aa10.24□□□□□ -0.77
USP33-210ENST00000498328 FAM163AQ96GL9 167 aaPredicted RBP10.22□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 8.7 ms