RNA–Protein interactions for RNA: ENST00000497791.5

UMPS-209, Transcript of uridine monophosphate synthetase, human

TSL 1 (best)

Gene UMPS, Length 1,691 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
UMPS-209	ENST00000497791	XRRA1	Q6P2D8	792 aa		16.88	■□□□□ 0.29
UMPS-209	ENST00000497791	FBXO46	Q6PJ61	603 aa	Predicted RBP	16.88	■□□□□ 0.29
UMPS-209	ENST00000497791	MBOAT7	Q96N66	472 aa		16.88	■□□□□ 0.29
UMPS-209	ENST00000497791	ABHD16B	Q9H3Z7	469 aa		16.88	■□□□□ 0.29
UMPS-209	ENST00000497791	VTA1	Q9NP79	307 aa		16.88	■□□□□ 0.29
UMPS-209	ENST00000497791	CNPY2	Q9Y2B0	182 aa		16.88	■□□□□ 0.29
UMPS-209	ENST00000497791	TELO2	Q9Y4R8	837 aa		16.88	■□□□□ 0.29
UMPS-209	ENST00000497791	ATP9A	O75110	1047 aa		16.88	■□□□□ 0.29
UMPS-209	ENST00000497791	MCM7	P33993	719 aa		16.88	■□□□□ 0.29
UMPS-209	ENST00000497791	MTFR1	Q15390	333 aa		16.88	■□□□□ 0.29
UMPS-209	ENST00000497791	LY6K	Q17RY6	165 aa		16.88	■□□□□ 0.29
UMPS-209	ENST00000497791	SLC9C1	Q4G0N8	1177 aa		16.88	■□□□□ 0.29
UMPS-209	ENST00000497791	ANO1	Q5XXA6	986 aa		16.88	■□□□□ 0.29
UMPS-209	ENST00000497791	PLA2G4D	Q86XP0	818 aa		16.88	■□□□□ 0.29
UMPS-209	ENST00000497791	TRMT44	Q8IYL2	757 aa	Known RBP	16.88	■□□□□ 0.29
UMPS-209	ENST00000497791	COPS5	Q92905	334 aa		16.88	■□□□□ 0.29
UMPS-209	ENST00000497791	MPHOSPH6	Q99547	160 aa	Known RBP	16.88	■□□□□ 0.29
UMPS-209	ENST00000497791	TMEM60	Q9H2L4	133 aa		16.88	■□□□□ 0.29
UMPS-209	ENST00000497791	JADE2	Q9NQC1	790 aa		16.88	■□□□□ 0.29
UMPS-209	ENST00000497791	KCNH7	Q9NS40	1196 aa		16.88	■□□□□ 0.29
UMPS-209	ENST00000497791	DDX25	Q9UHL0	483 aa	Known RBP	16.88	■□□□□ 0.29
UMPS-209	ENST00000497791	RBM47	A0AV96	593 aa	Known RBP	16.87	■□□□□ 0.29
UMPS-209	ENST00000497791	POTEF	A5A3E0	1075 aa		16.87	■□□□□ 0.29
UMPS-209	ENST00000497791		B4DLN1	442 aa		16.87	■□□□□ 0.29
UMPS-209	ENST00000497791	IRX5	P78411	483 aa	Predicted RBP	16.87	■□□□□ 0.29
UMPS-209	ENST00000497791	PPP4R3A	Q6IN85	833 aa		16.87	■□□□□ 0.29
UMPS-209	ENST00000497791	MCOLN1	Q9GZU1	580 aa		16.87	■□□□□ 0.29
UMPS-209	ENST00000497791	ZSCAN16	Q9H4T2	348 aa	Predicted RBP	16.87	■□□□□ 0.29
UMPS-209	ENST00000497791	MKI67	P46013	3256 aa	Known RBP	16.87	■□□□□ 0.29
UMPS-209	ENST00000497791	SPATA31C2	B4DYI2	1134 aa		16.86	■□□□□ 0.29
UMPS-209	ENST00000497791	MSH4	O15457	936 aa		16.86	■□□□□ 0.29
UMPS-209	ENST00000497791	SMPD1	P17405	629 aa		16.86	■□□□□ 0.29
UMPS-209	ENST00000497791	ITGB3BP	Q13352	177 aa	Predicted RBP	16.86	■□□□□ 0.29
UMPS-209	ENST00000497791	MTMR1	Q13613	665 aa		16.86	■□□□□ 0.29
UMPS-209	ENST00000497791	CCDC62	Q6P9F0	684 aa		16.86	■□□□□ 0.29
UMPS-209	ENST00000497791	UNC93B1	Q9H1C4	597 aa		16.86	■□□□□ 0.29
UMPS-209	ENST00000497791	AGO4	Q9HCK5	861 aa	Known RBP	16.86	■□□□□ 0.29
UMPS-209	ENST00000497791	EIF4ENIF1	Q9NRA8	985 aa	Known RBP	16.86	■□□□□ 0.29
UMPS-209	ENST00000497791	TFIP11	Q9UBB9	837 aa	Known RBP	16.86	■□□□□ 0.29
UMPS-209	ENST00000497791	NOL7	Q9UMY1	257 aa	Known RBP	16.86	■□□□□ 0.29
UMPS-209	ENST00000497791	CLIC4	Q9Y696	253 aa		16.86	■□□□□ 0.29
UMPS-209	ENST00000497791	STAM2	O75886	525 aa		16.85	■□□□□ 0.29
UMPS-209	ENST00000497791	KCNA2	P16389	499 aa		16.85	■□□□□ 0.29
UMPS-209	ENST00000497791	UBA1	P22314	1058 aa	Known RBP	16.85	■□□□□ 0.29
UMPS-209	ENST00000497791	CNGA1	P29973	690 aa		16.85	■□□□□ 0.29
UMPS-209	ENST00000497791	ICAM3	P32942	547 aa		16.85	■□□□□ 0.29
UMPS-209	ENST00000497791	TRAPPC10	P48553	1259 aa		16.85	■□□□□ 0.29
UMPS-209	ENST00000497791	CEBPZ	Q03701	1054 aa	Known RBP	16.85	■□□□□ 0.29
UMPS-209	ENST00000497791		Q4G0T1	1027 aa		16.85	■□□□□ 0.29
UMPS-209	ENST00000497791	RILPL1	Q5EBL4	403 aa		16.85	■□□□□ 0.29
UMPS-209	ENST00000497791	MOXD1	Q6UVY6	613 aa		16.85	■□□□□ 0.29
UMPS-209	ENST00000497791	C4orf32	Q8N8J7	132 aa		16.85	■□□□□ 0.29
UMPS-209	ENST00000497791	ETNPPL	Q8TBG4	499 aa		16.85	■□□□□ 0.29
UMPS-209	ENST00000497791	HAS1	Q92839	578 aa		16.85	■□□□□ 0.29
UMPS-209	ENST00000497791	GPRASP2	Q96D09	838 aa		16.85	■□□□□ 0.29
UMPS-209	ENST00000497791	USP28	Q96RU2	1077 aa		16.85	■□□□□ 0.29
UMPS-209	ENST00000497791	DDX41	Q9UJV9	622 aa	Known RBP	16.85	■□□□□ 0.29
UMPS-209	ENST00000497791	CIZ1	Q9ULV3	898 aa	Predicted RBP	16.85	■□□□□ 0.29
UMPS-209	ENST00000497791	FIBP	O43427	364 aa		16.85	■□□□□ 0.29
UMPS-209	ENST00000497791	NEMF	O60524	1076 aa		16.85	■□□□□ 0.29
UMPS-209	ENST00000497791	PDIA4	P13667	645 aa	Known RBP	16.85	■□□□□ 0.29
UMPS-209	ENST00000497791	NUCB2	P80303	420 aa		16.85	■□□□□ 0.29
UMPS-209	ENST00000497791	DNM1	Q05193	864 aa	Known RBP	16.85	■□□□□ 0.29
UMPS-209	ENST00000497791	PKN2	Q16513	984 aa	Known RBP	16.85	■□□□□ 0.29
UMPS-209	ENST00000497791	NIPA1	Q7RTP0	329 aa		16.85	■□□□□ 0.29
UMPS-209	ENST00000497791	NLRX1	Q86UT6	975 aa		16.85	■□□□□ 0.29
UMPS-209	ENST00000497791	KCNMB3	Q9NPA1	279 aa		16.85	■□□□□ 0.29
UMPS-209	ENST00000497791	TXN	P10599	105 aa	Known RBP	16.84	■□□□□ 0.29
UMPS-209	ENST00000497791	GCFC2	P16383	781 aa	Known RBP	16.84	■□□□□ 0.29
UMPS-209	ENST00000497791	SF3A1	Q15459	793 aa	Known RBP	16.84	■□□□□ 0.29
UMPS-209	ENST00000497791	GNPTAB	Q3T906	1256 aa		16.84	■□□□□ 0.29
UMPS-209	ENST00000497791	SCFD2	Q8WU76	684 aa		16.84	■□□□□ 0.29
UMPS-209	ENST00000497791	ZNF333	Q96JL9	665 aa		16.84	■□□□□ 0.29
UMPS-209	ENST00000497791	CHMP5	Q9NZZ3	219 aa		16.84	■□□□□ 0.29
UMPS-209	ENST00000497791	DHX15	O43143	795 aa	Known RBP	16.83	■□□□□ 0.28
UMPS-209	ENST00000497791	TNFAIP2	Q03169	654 aa		16.83	■□□□□ 0.28
UMPS-209	ENST00000497791	PTGDR	Q13258	359 aa		16.83	■□□□□ 0.28
UMPS-209	ENST00000497791	TTLL4	Q14679	1199 aa		16.83	■□□□□ 0.28
UMPS-209	ENST00000497791	COL13A1	Q5TAT6	717 aa	Predicted RBP	16.83	■□□□□ 0.28
UMPS-209	ENST00000497791	MTMR9	Q96QG7	549 aa		16.83	■□□□□ 0.28
UMPS-209	ENST00000497791	GNE	Q9Y223	722 aa	Known RBP	16.83	■□□□□ 0.28
UMPS-209	ENST00000497791	DDX39A	O00148	427 aa	Known RBP	16.82	■□□□□ 0.28
UMPS-209	ENST00000497791	IPO5	O00410	1097 aa	Known RBP	16.82	■□□□□ 0.28
UMPS-209	ENST00000497791	SEPT4	O43236	478 aa		16.82	■□□□□ 0.28
UMPS-209	ENST00000497791	GGPS1	O95749	300 aa		16.82	■□□□□ 0.28
UMPS-209	ENST00000497791	CCL5	P13501	91 aa		16.82	■□□□□ 0.28
UMPS-209	ENST00000497791	SET	Q01105	290 aa	Predicted RBP	16.82	■□□□□ 0.28
UMPS-209	ENST00000497791	PTPA	Q15257	358 aa		16.82	■□□□□ 0.28
UMPS-209	ENST00000497791	DUSP28	Q4G0W2	176 aa		16.82	■□□□□ 0.28
UMPS-209	ENST00000497791	IQSEC1	Q6DN90	963 aa		16.82	■□□□□ 0.28
UMPS-209	ENST00000497791	CYFIP1	Q7L576	1253 aa		16.82	■□□□□ 0.28
UMPS-209	ENST00000497791	ARMC5	Q96C12	935 aa		16.82	■□□□□ 0.28
UMPS-209	ENST00000497791	ZNF577	Q9BSK1	485 aa		16.82	■□□□□ 0.28
UMPS-209	ENST00000497791	NRBP1	Q9UHY1	535 aa		16.82	■□□□□ 0.28
UMPS-209	ENST00000497791	FAM184B	Q9ULE4	1060 aa		16.82	■□□□□ 0.28
UMPS-209	ENST00000497791	MYH9	P35579	1960 aa	Known RBP	16.82	■□□□□ 0.28
UMPS-209	ENST00000497791	AKR1A1	P14550	325 aa		16.81	■□□□□ 0.28
UMPS-209	ENST00000497791	SP4	Q02446	784 aa		16.81	■□□□□ 0.28
UMPS-209	ENST00000497791	ARHGAP1	Q07960	439 aa		16.81	■□□□□ 0.28
UMPS-209	ENST00000497791	IL17A	Q16552	155 aa		16.81	■□□□□ 0.28

Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms