RNA–Protein interactions for RNA: ENST00000497470.1

SCAMP3-209, Transcript of secretory carrier membrane protein 3, humanhuman

TSL 5

Gene SCAMP3, Length 845 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP3-209ENST00000497470 PCDHB6Q9Y5E3 794 aa22.37■■□□□ 1.17
SCAMP3-209ENST00000497470 PPP6R2O75170 966 aa22.36■■□□□ 1.17
SCAMP3-209ENST00000497470 TDP2O95551 362 aa22.36■■□□□ 1.17
SCAMP3-209ENST00000497470 TTLL4Q14679 1199 aa22.36■■□□□ 1.17
SCAMP3-209ENST00000497470 PTPAQ15257 358 aa22.36■■□□□ 1.17
SCAMP3-209ENST00000497470 TAPT1Q6NXT6 567 aa22.36■■□□□ 1.17
SCAMP3-209ENST00000497470 CCDC62Q6P9F0 684 aa22.36■■□□□ 1.17
SCAMP3-209ENST00000497470 LINC00301Q8NCQ3 95 aa22.36■■□□□ 1.17
SCAMP3-209ENST00000497470 KCNG4Q8TDN1 519 aa22.36■■□□□ 1.17
SCAMP3-209ENST00000497470 TRIB2Q92519 343 aa22.36■■□□□ 1.17
SCAMP3-209ENST00000497470 USP28Q96RU2 1077 aa22.36■■□□□ 1.17
SCAMP3-209ENST00000497470 CAPN2P17655 700 aa22.35■■□□□ 1.17
SCAMP3-209ENST00000497470 GRK4P32298 578 aa22.35■■□□□ 1.17
SCAMP3-209ENST00000497470 MCM7P33993 719 aa22.35■■□□□ 1.17
SCAMP3-209ENST00000497470 UBXN2AP68543 259 aa22.35■■□□□ 1.17
SCAMP3-209ENST00000497470 NEDD9Q14511 834 aa22.35■■□□□ 1.17
SCAMP3-209ENST00000497470 SF3A1Q15459 793 aaKnown RBP22.35■■□□□ 1.17
SCAMP3-209ENST00000497470 CSPP1Q1MSJ5 1256 aa22.35■■□□□ 1.17
SCAMP3-209ENST00000497470 PRR16Q569H4 304 aa22.35■■□□□ 1.17
SCAMP3-209ENST00000497470 SLC5A5Q92911 643 aa22.35■■□□□ 1.17
SCAMP3-209ENST00000497470 EMID1Q96A84 441 aaPredicted RBP22.35■■□□□ 1.17
SCAMP3-209ENST00000497470 FERMT2Q96AC1 680 aa22.35■■□□□ 1.17
SCAMP3-209ENST00000497470 ZSWIM8A7E2V4 1837 aa22.35■■□□□ 1.17
SCAMP3-209ENST00000497470 MYH15Q9Y2K3 1946 aa22.35■■□□□ 1.17
SCAMP3-209ENST00000497470 KIAA1217Q5T5P2 1943 aa22.34■■□□□ 1.17
SCAMP3-209ENST00000497470 OR52Z1P0C646 297 aa22.34■■□□□ 1.17
SCAMP3-209ENST00000497470 ZNF865P0CJ78 1059 aaPredicted RBP22.34■■□□□ 1.17
SCAMP3-209ENST00000497470 CYBAP13498 195 aa22.34■■□□□ 1.17
SCAMP3-209ENST00000497470 LBX1P52954 281 aa22.34■■□□□ 1.17
SCAMP3-209ENST00000497470 DNM1Q05193 864 aaKnown RBP22.34■■□□□ 1.17
SCAMP3-209ENST00000497470 PTGDRQ13258 359 aa22.34■■□□□ 1.17
SCAMP3-209ENST00000497470 PDIA5Q14554 519 aa22.34■■□□□ 1.17
SCAMP3-209ENST00000497470 ZNF174Q15697 407 aa22.34■■□□□ 1.17
SCAMP3-209ENST00000497470 CALCRLQ16602 461 aa22.34■■□□□ 1.17
SCAMP3-209ENST00000497470 CCL14Q16627 93 aa22.34■■□□□ 1.17
SCAMP3-209ENST00000497470 FBXO46Q6PJ61 603 aaPredicted RBP22.34■■□□□ 1.17
SCAMP3-209ENST00000497470 CYP2W1Q8TAV3 490 aa22.34■■□□□ 1.17
SCAMP3-209ENST00000497470 TNPO1Q92973 898 aaKnown RBP22.34■■□□□ 1.17
SCAMP3-209ENST00000497470 WDR11Q9BZH6 1224 aa22.34■■□□□ 1.17
SCAMP3-209ENST00000497470 AGO4Q9HCK5 861 aaKnown RBP22.34■■□□□ 1.17
SCAMP3-209ENST00000497470 DDX41Q9UJV9 622 aaKnown RBP22.34■■□□□ 1.17
SCAMP3-209ENST00000497470 STK24Q9Y6E0 443 aa22.34■■□□□ 1.17
SCAMP3-209ENST00000497470 ELP1O95163 1332 aa22.33■■□□□ 1.17
SCAMP3-209ENST00000497470 IPO5O00410 1097 aaKnown RBP22.33■■□□□ 1.17
SCAMP3-209ENST00000497470 WNT7AO00755 349 aa22.33■■□□□ 1.17
SCAMP3-209ENST00000497470 MSH4O15457 936 aa22.33■■□□□ 1.17
SCAMP3-209ENST00000497470 SLC26A4O43511 780 aa22.33■■□□□ 1.17
SCAMP3-209ENST00000497470 SLC37A4O43826 429 aa22.33■■□□□ 1.17
SCAMP3-209ENST00000497470 NKX3-2P78367 333 aa22.33■■□□□ 1.17
SCAMP3-209ENST00000497470 SEMA3FQ13275 785 aa22.33■■□□□ 1.17
SCAMP3-209ENST00000497470 DUSP28Q4G0W2 176 aa22.33■■□□□ 1.17
SCAMP3-209ENST00000497470 FAM173BQ6P4H8 233 aa22.33■■□□□ 1.17
SCAMP3-209ENST00000497470 RDM1Q8NG50 284 aa22.33■■□□□ 1.17
SCAMP3-209ENST00000497470 HAS1Q92839 578 aa22.33■■□□□ 1.17
SCAMP3-209ENST00000497470 FAM184BQ9ULE4 1060 aa22.33■■□□□ 1.17
SCAMP3-209ENST00000497470 MSCO60682 206 aa22.32■■□□□ 1.16
SCAMP3-209ENST00000497470 PSMD10O75832 226 aa22.32■■□□□ 1.16
SCAMP3-209ENST00000497470 KCNA2P16389 499 aa22.32■■□□□ 1.16
SCAMP3-209ENST00000497470 FXR2P51116 673 aaKnown RBP eCLIP22.32■■□□□ 1.16
SCAMP3-209ENST00000497470 FOXD4L5Q5VV16 416 aaPredicted RBP22.32■■□□□ 1.16
SCAMP3-209ENST00000497470 B3GNT9Q6UX72 402 aa22.32■■□□□ 1.16
SCAMP3-209ENST00000497470 ZNF579Q8NAF0 562 aaKnown RBP22.32■■□□□ 1.16
SCAMP3-209ENST00000497470 FOXD4L4Q8WXT5 416 aaPredicted RBP22.32■■□□□ 1.16
SCAMP3-209ENST00000497470 ZNF577Q9BSK1 485 aa22.32■■□□□ 1.16
SCAMP3-209ENST00000497470 RAB34Q9BZG1 259 aa22.32■■□□□ 1.16
SCAMP3-209ENST00000497470 SRPRBQ9Y5M8 271 aaKnown RBP22.32■■□□□ 1.16
SCAMP3-209ENST00000497470 CLIC4Q9Y696 253 aa22.32■■□□□ 1.16
SCAMP3-209ENST00000497470 MRVI1Q9Y6F6 885 aa22.32■■□□□ 1.16
SCAMP3-209ENST00000497470 SPTLC2O15270 562 aa22.31■■□□□ 1.16
SCAMP3-209ENST00000497470 DHX15O43143 795 aaKnown RBP22.31■■□□□ 1.16
SCAMP3-209ENST00000497470 SEPT4O43236 478 aa22.31■■□□□ 1.16
SCAMP3-209ENST00000497470 ARP10275 920 aa22.31■■□□□ 1.16
SCAMP3-209ENST00000497470 AKR1A1P14550 325 aa22.31■■□□□ 1.16
SCAMP3-209ENST00000497470 ATP2B1P20020 1258 aa22.31■■□□□ 1.16
SCAMP3-209ENST00000497470 CYP2C19P33261 490 aa22.31■■□□□ 1.16
SCAMP3-209ENST00000497470 PPP2R5CQ13362 524 aa22.31■■□□□ 1.16
SCAMP3-209ENST00000497470 POTEDQ86YR6 584 aa22.31■■□□□ 1.16
SCAMP3-209ENST00000497470 KCTD17Q8N5Z5 321 aa22.31■■□□□ 1.16
SCAMP3-209ENST00000497470 TMEM87AQ8NBN3 555 aa22.31■■□□□ 1.16
SCAMP3-209ENST00000497470 AK8Q96MA6 479 aa22.31■■□□□ 1.16
SCAMP3-209ENST00000497470 PCDHA12Q9UN75 941 aa22.31■■□□□ 1.16
SCAMP3-209ENST00000497470 PTCH2Q9Y6C5 1203 aa22.31■■□□□ 1.16
SCAMP3-209ENST00000497470 CEP350Q5VT06 3117 aa22.31■■□□□ 1.16
SCAMP3-209ENST00000497470 KRT76Q01546 638 aa22.3■■□□□ 1.16
SCAMP3-209ENST00000497470 CACNB2Q08289 660 aaPredicted RBP22.3■■□□□ 1.16
SCAMP3-209ENST00000497470 STK38Q15208 465 aa22.3■■□□□ 1.16
SCAMP3-209ENST00000497470 TMEM266Q2M3C6 531 aa22.3■■□□□ 1.16
SCAMP3-209ENST00000497470 ZNF746Q6NUN9 644 aaPredicted RBP22.3■■□□□ 1.16
SCAMP3-209ENST00000497470 METTL7BQ6UX53 244 aa22.3■■□□□ 1.16
SCAMP3-209ENST00000497470 DTHD1Q6ZMT9 781 aa22.3■■□□□ 1.16
SCAMP3-209ENST00000497470 SEPT14Q6ZU15 432 aa22.3■■□□□ 1.16
SCAMP3-209ENST00000497470 FBXO16Q8IX29 292 aaPredicted RBP22.3■■□□□ 1.16
SCAMP3-209ENST00000497470 GBP4Q96PP9 640 aa22.3■■□□□ 1.16
SCAMP3-209ENST00000497470 SDF4Q9BRK5 362 aa22.3■■□□□ 1.16
SCAMP3-209ENST00000497470 TMEM60Q9H2L4 133 aa22.3■■□□□ 1.16
SCAMP3-209ENST00000497470 MCM3APO60318 1980 aa22.3■■□□□ 1.16
SCAMP3-209ENST00000497470 DUSP11O75319 330 aaKnown RBP22.29■■□□□ 1.16
SCAMP3-209ENST00000497470 TXNP10599 105 aaKnown RBP22.29■■□□□ 1.16
SCAMP3-209ENST00000497470 SFNP31947 248 aa22.29■■□□□ 1.16
SCAMP3-209ENST00000497470 LONP1P36776 959 aaKnown RBP22.29■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms