RNA–Protein interactions for RNA: ENST00000496882.5

SRRM1-220, Transcript of serine and arginine repetitive matrix 1, humanhuman

TSL 5

Gene SRRM1, Length 834 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM1-220ENST00000496882 MRVI1Q9Y6F6 885 aa9.07□□□□□ -0.96
SRRM1-220ENST00000496882 RANBP2P49792 3224 aaKnown RBP9.06□□□□□ -0.96
SRRM1-220ENST00000496882 TMEM265A0A087WTH1 108 aa9.06□□□□□ -0.96
SRRM1-220ENST00000496882 HSFX4A0A1B0GTS1 333 aaPredicted RBP9.06□□□□□ -0.96
SRRM1-220ENST00000496882 HSFX3A0A1B0GWH4 333 aaPredicted RBP9.06□□□□□ -0.96
SRRM1-220ENST00000496882 B4GALT4O60513 344 aa9.06□□□□□ -0.96
SRRM1-220ENST00000496882 EIF3JO75822 258 aaKnown RBP9.06□□□□□ -0.96
SRRM1-220ENST00000496882 CD4P01730 458 aa9.06□□□□□ -0.96
SRRM1-220ENST00000496882 NR3C2P08235 984 aa9.06□□□□□ -0.96
SRRM1-220ENST00000496882 CSF2RAP15509 400 aa9.06□□□□□ -0.96
SRRM1-220ENST00000496882 CASTP20810 708 aaKnown RBP9.06□□□□□ -0.96
SRRM1-220ENST00000496882 PTGS1P23219 599 aa9.06□□□□□ -0.96
SRRM1-220ENST00000496882 CCND2P30279 289 aa9.06□□□□□ -0.96
SRRM1-220ENST00000496882 CYP2C18P33260 490 aa9.06□□□□□ -0.96
SRRM1-220ENST00000496882 HSD17B4P51659 736 aa9.06□□□□□ -0.96
SRRM1-220ENST00000496882 PTPN11Q06124 597 aaPredicted RBP9.06□□□□□ -0.96
SRRM1-220ENST00000496882 BMP2KLQ5H9B9 411 aa9.06□□□□□ -0.96
SRRM1-220ENST00000496882 TMEM63BQ5T3F8 832 aa9.06□□□□□ -0.96
SRRM1-220ENST00000496882 MYSM1Q5VVJ2 828 aa9.06□□□□□ -0.96
SRRM1-220ENST00000496882 MB21D2Q8IYB1 491 aaPredicted RBP9.06□□□□□ -0.96
SRRM1-220ENST00000496882 RPUSD2Q8IZ73 545 aaKnown RBP9.06□□□□□ -0.96
SRRM1-220ENST00000496882 ZNF654Q8IZM8 581 aa9.06□□□□□ -0.96
SRRM1-220ENST00000496882 CCDC82Q8N4S0 544 aa9.06□□□□□ -0.96
SRRM1-220ENST00000496882 CCDC155Q8N6L0 562 aa9.06□□□□□ -0.96
SRRM1-220ENST00000496882 ZNF454Q8N9F8 522 aa9.06□□□□□ -0.96
SRRM1-220ENST00000496882 RETREG2Q8NC44 543 aa9.06□□□□□ -0.96
SRRM1-220ENST00000496882 SLC17A8Q8NDX2 589 aa9.06□□□□□ -0.96
SRRM1-220ENST00000496882 PIBF1Q8WXW3 757 aa9.06□□□□□ -0.96
SRRM1-220ENST00000496882 TBC1D5Q92609 795 aa9.06□□□□□ -0.96
SRRM1-220ENST00000496882 COPS5Q92905 334 aa9.06□□□□□ -0.96
SRRM1-220ENST00000496882 MTMR8Q96EF0 704 aa9.06□□□□□ -0.96
SRRM1-220ENST00000496882 FAM161BQ96MY7 647 aa9.06□□□□□ -0.96
SRRM1-220ENST00000496882 MAP3K14Q99558 947 aa9.06□□□□□ -0.96
SRRM1-220ENST00000496882 ALDH8A1Q9H2A2 487 aaPredicted RBP9.06□□□□□ -0.96
SRRM1-220ENST00000496882 RIOX1Q9H6W3 641 aa9.06□□□□□ -0.96
SRRM1-220ENST00000496882 IL23AQ9NPF7 189 aa9.06□□□□□ -0.96
SRRM1-220ENST00000496882 LCTP09848 1927 aa9.05□□□□□ -0.96
SRRM1-220ENST00000496882 SLC27A2O14975 620 aa9.05□□□□□ -0.96
SRRM1-220ENST00000496882 CDC45O75419 566 aa9.05□□□□□ -0.96
SRRM1-220ENST00000496882 FGBP02675 491 aa9.05□□□□□ -0.96
SRRM1-220ENST00000496882 NEFLP07196 543 aa9.05□□□□□ -0.96
SRRM1-220ENST00000496882 HOXA13P31271 388 aaPredicted RBP9.05□□□□□ -0.96
SRRM1-220ENST00000496882 CLK2P49760 499 aaKnown RBP9.05□□□□□ -0.96
SRRM1-220ENST00000496882 EPHB4P54760 987 aa9.05□□□□□ -0.96
SRRM1-220ENST00000496882 CCL23P55773 120 aa9.05□□□□□ -0.96
SRRM1-220ENST00000496882 TROAPQ12815 778 aa9.05□□□□□ -0.96
SRRM1-220ENST00000496882 BFSP2Q13515 415 aa9.05□□□□□ -0.96
SRRM1-220ENST00000496882 LAMC2Q13753 1193 aa9.05□□□□□ -0.96
SRRM1-220ENST00000496882 DGKDQ16760 1214 aa9.05□□□□□ -0.96
SRRM1-220ENST00000496882 LY6KQ17RY6 165 aa9.05□□□□□ -0.96
SRRM1-220ENST00000496882 NBPF20Q3BBV1 942 aa9.05□□□□□ -0.96
SRRM1-220ENST00000496882 GNPTABQ3T906 1256 aa9.05□□□□□ -0.96
SRRM1-220ENST00000496882 CREB3L3Q68CJ9 461 aa9.05□□□□□ -0.96
SRRM1-220ENST00000496882 NFRKBQ6P4R8 1299 aa9.05□□□□□ -0.96
SRRM1-220ENST00000496882 STOX1Q6ZVD7 989 aa9.05□□□□□ -0.96
SRRM1-220ENST00000496882 FCHSD1Q86WN1 690 aa9.05□□□□□ -0.96
SRRM1-220ENST00000496882 DHX37Q8IY37 1157 aaKnown RBP9.05□□□□□ -0.96
SRRM1-220ENST00000496882 TTC13Q8NBP0 860 aa9.05□□□□□ -0.96
SRRM1-220ENST00000496882 SMARCC2Q8TAQ2 1214 aa9.05□□□□□ -0.96
SRRM1-220ENST00000496882 IGDCC4Q8TDY8 1250 aa9.05□□□□□ -0.96
SRRM1-220ENST00000496882 AFG1LQ8WV93 481 aa9.05□□□□□ -0.96
SRRM1-220ENST00000496882 CCDC136Q96JN2 1154 aa9.05□□□□□ -0.96
SRRM1-220ENST00000496882 BUD13Q9BRD0 619 aaKnown RBP eCLIP9.05□□□□□ -0.96
SRRM1-220ENST00000496882 KATNAL1Q9BW62 490 aa9.05□□□□□ -0.96
SRRM1-220ENST00000496882 SPZ1Q9BXG8 430 aa9.05□□□□□ -0.96
SRRM1-220ENST00000496882 LSG1Q9H089 658 aaKnown RBP9.05□□□□□ -0.96
SRRM1-220ENST00000496882 TRPV6Q9H1D0 765 aa9.05□□□□□ -0.96
SRRM1-220ENST00000496882 LY9Q9HBG7 655 aa9.05□□□□□ -0.96
SRRM1-220ENST00000496882 COL20A1Q9P218 1284 aa9.05□□□□□ -0.96
SRRM1-220ENST00000496882 SLC12A7Q9Y666 1083 aa9.05□□□□□ -0.96
SRRM1-220ENST00000496882 MYH6P13533 1939 aa9.04□□□□□ -0.96
SRRM1-220ENST00000496882 ZBBXA8MT70 800 aa9.04□□□□□ -0.96
SRRM1-220ENST00000496882 SH2B2O14492 632 aaPredicted RBP9.04□□□□□ -0.96
SRRM1-220ENST00000496882 STAM2O75886 525 aa9.04□□□□□ -0.96
SRRM1-220ENST00000496882 ARIH2O95376 493 aa9.04□□□□□ -0.96
SRRM1-220ENST00000496882 PFKMP08237 780 aa9.04□□□□□ -0.96
SRRM1-220ENST00000496882 MMP3P08254 477 aa9.04□□□□□ -0.96
SRRM1-220ENST00000496882 ACRP10323 421 aa9.04□□□□□ -0.96
SRRM1-220ENST00000496882 ACTN1P12814 892 aa9.04□□□□□ -0.96
SRRM1-220ENST00000496882 SMARCA1P28370 1054 aa9.04□□□□□ -0.96
SRRM1-220ENST00000496882 LIFRP42702 1097 aa9.04□□□□□ -0.96
SRRM1-220ENST00000496882 ANTXR2P58335 489 aa9.04□□□□□ -0.96
SRRM1-220ENST00000496882 FGD1P98174 961 aa9.04□□□□□ -0.96
SRRM1-220ENST00000496882 GHRHRQ02643 423 aa9.04□□□□□ -0.96
SRRM1-220ENST00000496882 KRT32Q14532 448 aa9.04□□□□□ -0.96
SRRM1-220ENST00000496882 PGM5Q15124 567 aa9.04□□□□□ -0.96
SRRM1-220ENST00000496882 TMEM240Q5SV17 173 aa9.04□□□□□ -0.96
SRRM1-220ENST00000496882 CCDC62Q6P9F0 684 aa9.04□□□□□ -0.96
SRRM1-220ENST00000496882 ZNF365Q70YC5 407 aa9.04□□□□□ -0.96
SRRM1-220ENST00000496882 PDCD2LQ9BRP1 358 aa9.04□□□□□ -0.96
SRRM1-220ENST00000496882 MYL10Q9BUA6 226 aa9.04□□□□□ -0.96
SRRM1-220ENST00000496882 NOC4LQ9BVI4 516 aaKnown RBP9.04□□□□□ -0.96
SRRM1-220ENST00000496882 MLXIPQ9HAP2 919 aa9.04□□□□□ -0.96
SRRM1-220ENST00000496882 SENP2Q9HC62 589 aa9.04□□□□□ -0.96
SRRM1-220ENST00000496882 TRMT13Q9NUP7 481 aaKnown RBP9.04□□□□□ -0.96
SRRM1-220ENST00000496882 MSRAQ9UJ68 235 aa9.04□□□□□ -0.96
SRRM1-220ENST00000496882 TAF6LQ9Y6J9 622 aa9.04□□□□□ -0.96
SRRM1-220ENST00000496882 GRIN2DO15399 1336 aa9.04□□□□□ -0.96
SRRM1-220ENST00000496882 NOP56O00567 594 aaKnown RBP9.03□□□□□ -0.96
SRRM1-220ENST00000496882 CYTH3O43739 400 aa9.03□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms