RNA–Protein interactions for RNA: ENST00000496756.2

PHGDH-207, Transcript of phosphoglycerate dehydrogenase, humanhuman

TSL 2

Gene PHGDH, Length 508 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-207ENST00000496756 DUSP28Q4G0W2 176 aa15.21■□□□□ 0.03
PHGDH-207ENST00000496756 SLFN13Q68D06 897 aa15.21■□□□□ 0.03
PHGDH-207ENST00000496756 EEPD1Q7L9B9 569 aa15.21■□□□□ 0.03
PHGDH-207ENST00000496756 FBXO16Q8IX29 292 aaPredicted RBP15.21■□□□□ 0.03
PHGDH-207ENST00000496756 STK11IPQ8N1F8 1099 aa15.21■□□□□ 0.03
PHGDH-207ENST00000496756 RETREG2Q8NC44 543 aa15.21■□□□□ 0.03
PHGDH-207ENST00000496756 WASF1Q92558 559 aa15.21■□□□□ 0.03
PHGDH-207ENST00000496756 TRERF1Q96PN7 1200 aa15.21■□□□□ 0.03
PHGDH-207ENST00000496756 ZSCAN10Q96SZ4 725 aaPredicted RBP15.21■□□□□ 0.03
PHGDH-207ENST00000496756 GPHNQ9NQX3 736 aaPredicted RBP15.21■□□□□ 0.03
PHGDH-207ENST00000496756 PDGFCQ9NRA1 345 aa15.21■□□□□ 0.03
PHGDH-207ENST00000496756 ISY1Q9ULR0 285 aaKnown RBP15.21■□□□□ 0.03
PHGDH-207ENST00000496756 MTMR6Q9Y217 621 aa15.21■□□□□ 0.03
PHGDH-207ENST00000496756 VPS37CA5D8V6 355 aaPredicted RBP15.2■□□□□ 0.02
PHGDH-207ENST00000496756 TRAK2O60296 914 aa15.2■□□□□ 0.02
PHGDH-207ENST00000496756 BAIAP3O94812 1187 aa15.2■□□□□ 0.02
PHGDH-207ENST00000496756 MBD3O95983 291 aa15.2■□□□□ 0.02
PHGDH-207ENST00000496756 ALAS1P13196 640 aa15.2■□□□□ 0.02
PHGDH-207ENST00000496756 IKQ13123 557 aaPredicted RBP15.2■□□□□ 0.02
PHGDH-207ENST00000496756 GRB10Q13322 594 aa15.2■□□□□ 0.02
PHGDH-207ENST00000496756 BRDTQ58F21 947 aaPredicted RBP15.2■□□□□ 0.02
PHGDH-207ENST00000496756 ATL3Q6DD88 541 aa15.2■□□□□ 0.02
PHGDH-207ENST00000496756 MCTP1Q6DN14 999 aa15.2■□□□□ 0.02
PHGDH-207ENST00000496756 LRRC47Q8N1G4 583 aaKnown RBP15.2■□□□□ 0.02
PHGDH-207ENST00000496756 FTOQ9C0B1 505 aaKnown RBP eCLIP15.2■□□□□ 0.02
PHGDH-207ENST00000496756 BRPF3Q9ULD4 1205 aa15.2■□□□□ 0.02
PHGDH-207ENST00000496756 ZNF536O15090 1300 aa15.19■□□□□ 0.02
PHGDH-207ENST00000496756 BRWD1Q9NSI6 2320 aa15.19■□□□□ 0.02
PHGDH-207ENST00000496756 FAM86C2PA6NEL3 165 aa15.19■□□□□ 0.02
PHGDH-207ENST00000496756 GOLGA8AA7E2F4 631 aa15.19■□□□□ 0.02
PHGDH-207ENST00000496756 PRR33A8MZF0 331 aa15.19■□□□□ 0.02
PHGDH-207ENST00000496756 RANBP6O60518 1105 aaKnown RBP15.19■□□□□ 0.02
PHGDH-207ENST00000496756 PLA2G6O60733 806 aa15.19■□□□□ 0.02
PHGDH-207ENST00000496756 DDAH1O94760 285 aa15.19■□□□□ 0.02
PHGDH-207ENST00000496756 IQCF3P0C7M6 154 aa15.19■□□□□ 0.02
PHGDH-207ENST00000496756 PTGS1P23219 599 aa15.19■□□□□ 0.02
PHGDH-207ENST00000496756 CCT2P78371 535 aaKnown RBP15.19■□□□□ 0.02
PHGDH-207ENST00000496756 PURAQ00577 322 aaKnown RBP15.19■□□□□ 0.02
PHGDH-207ENST00000496756 BFSP2Q13515 415 aa15.19■□□□□ 0.02
PHGDH-207ENST00000496756 PPP4R3BQ5MIZ7 849 aa15.19■□□□□ 0.02
PHGDH-207ENST00000496756 CATIPQ7Z7H3 387 aa15.19■□□□□ 0.02
PHGDH-207ENST00000496756 MORC4Q8TE76 937 aa15.19■□□□□ 0.02
PHGDH-207ENST00000496756 KHSRPQ92945 711 aaKnown RBP eCLIP15.19■□□□□ 0.02
PHGDH-207ENST00000496756 GMCL1Q96IK5 515 aa15.19■□□□□ 0.02
PHGDH-207ENST00000496756 MTG1Q9BT17 334 aaPredicted RBP15.19■□□□□ 0.02
PHGDH-207ENST00000496756 TCP11L1Q9NUJ3 509 aa15.19■□□□□ 0.02
PHGDH-207ENST00000496756 RBM28Q9NW13 759 aaKnown RBP15.19■□□□□ 0.02
PHGDH-207ENST00000496756 CYP39A1Q9NYL5 469 aa15.19■□□□□ 0.02
PHGDH-207ENST00000496756 ADD3Q9UEY8 706 aaKnown RBP15.19■□□□□ 0.02
PHGDH-207ENST00000496756 SCN5AQ14524 2016 aa15.19■□□□□ 0.02
PHGDH-207ENST00000496756 STK36Q9NRP7 1315 aa15.18■□□□□ 0.02
PHGDH-207ENST00000496756 LOC102724159A0A0B4J2E5 919 aa15.18■□□□□ 0.02
PHGDH-207ENST00000496756 TSPY2A6NKD2 308 aa15.18■□□□□ 0.02
PHGDH-207ENST00000496756 KPNA6O60684 536 aa15.18■□□□□ 0.02
PHGDH-207ENST00000496756 TSPY3P0CV98 308 aa15.18■□□□□ 0.02
PHGDH-207ENST00000496756 TSPY8P0CW00 308 aa15.18■□□□□ 0.02
PHGDH-207ENST00000496756 SLC1A4P43007 532 aa15.18■□□□□ 0.02
PHGDH-207ENST00000496756 KCNJ6P48051 423 aa15.18■□□□□ 0.02
PHGDH-207ENST00000496756 PWP2Q15269 919 aaKnown RBP15.18■□□□□ 0.02
PHGDH-207ENST00000496756 KLHL40Q2TBA0 621 aa15.18■□□□□ 0.02
PHGDH-207ENST00000496756 FAM47CQ5HY64 1035 aa15.18■□□□□ 0.02
PHGDH-207ENST00000496756 IFIT1BQ5T764 474 aaKnown RBP15.18■□□□□ 0.02
PHGDH-207ENST00000496756 NFRKBQ6P4R8 1299 aa15.18■□□□□ 0.02
PHGDH-207ENST00000496756 ALYREFQ86V81 257 aaKnown RBP15.18■□□□□ 0.02
PHGDH-207ENST00000496756 DGKHQ86XP1 1220 aa15.18■□□□□ 0.02
PHGDH-207ENST00000496756 TRIM22Q8IYM9 498 aa15.18■□□□□ 0.02
PHGDH-207ENST00000496756 TMEM87AQ8NBN3 555 aa15.18■□□□□ 0.02
PHGDH-207ENST00000496756 WDR11Q9BZH6 1224 aa15.18■□□□□ 0.02
PHGDH-207ENST00000496756 PLIN4Q96Q06 1357 aa15.17■□□□□ 0.02
PHGDH-207ENST00000496756 JAK2O60674 1132 aa15.17■□□□□ 0.02
PHGDH-207ENST00000496756 LPXNO60711 386 aa15.17■□□□□ 0.02
PHGDH-207ENST00000496756 PRDM1O75626 825 aa15.17■□□□□ 0.02
PHGDH-207ENST00000496756 CTDNEP1O95476 244 aa15.17■□□□□ 0.02
PHGDH-207ENST00000496756 MYL3P08590 195 aa15.17■□□□□ 0.02
PHGDH-207ENST00000496756 KRT85P78386 507 aa15.17■□□□□ 0.02
PHGDH-207ENST00000496756 PTPN11Q06124 597 aaPredicted RBP15.17■□□□□ 0.02
PHGDH-207ENST00000496756 SEC23AQ15436 765 aa15.17■□□□□ 0.02
PHGDH-207ENST00000496756 RTN1Q16799 776 aa15.17■□□□□ 0.02
PHGDH-207ENST00000496756 NBPF20Q3BBV1 942 aa15.17■□□□□ 0.02
PHGDH-207ENST00000496756 TMEM63BQ5T3F8 832 aa15.17■□□□□ 0.02
PHGDH-207ENST00000496756 NEDD1Q8NHV4 660 aa15.17■□□□□ 0.02
PHGDH-207ENST00000496756 ANKS1AQ92625 1134 aa15.17■□□□□ 0.02
PHGDH-207ENST00000496756 MAP3K14Q99558 947 aa15.17■□□□□ 0.02
PHGDH-207ENST00000496756 DDX49Q9Y6V7 483 aaKnown RBP15.17■□□□□ 0.02
PHGDH-207ENST00000496756 ARHGEF15O94989 841 aa15.16■□□□□ 0.02
PHGDH-207ENST00000496756 ALADP13716 330 aa15.16■□□□□ 0.02
PHGDH-207ENST00000496756 IFNAR1P17181 557 aa15.16■□□□□ 0.02
PHGDH-207ENST00000496756 MUM1L1Q5H9M0 696 aa15.16■□□□□ 0.02
PHGDH-207ENST00000496756 NSMFQ6X4W1 530 aa15.16■□□□□ 0.02
PHGDH-207ENST00000496756 MICU3Q86XE3 530 aa15.16■□□□□ 0.02
PHGDH-207ENST00000496756 ZNF654Q8IZM8 581 aa15.16■□□□□ 0.02
PHGDH-207ENST00000496756 GJD3Q8N144 294 aa15.16■□□□□ 0.02
PHGDH-207ENST00000496756 CCDC155Q8N6L0 562 aa15.16■□□□□ 0.02
PHGDH-207ENST00000496756 ZBED2Q9BTP6 218 aa15.16■□□□□ 0.02
PHGDH-207ENST00000496756 SCAND2PQ9GZW5 306 aaPredicted RBP15.16■□□□□ 0.02
PHGDH-207ENST00000496756 NCOA5Q9HCD5 579 aaKnown RBP15.16■□□□□ 0.02
PHGDH-207ENST00000496756 CD320Q9NPF0 282 aa15.16■□□□□ 0.02
PHGDH-207ENST00000496756 ORC3Q9UBD5 711 aaPredicted RBP15.16■□□□□ 0.02
PHGDH-207ENST00000496756 NOD1Q9Y239 953 aa15.16■□□□□ 0.02
PHGDH-207ENST00000496756 SCN10AQ9Y5Y9 1956 aa15.15■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms