RNA–Protein interactions for RNA: ENST00000496530.1

SMARCD3-215, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

TSL 2

Gene SMARCD3, Length 468 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-215ENST00000496530 KATNBL1Q9H079 304 aa9.32□□□□□ -0.92
SMARCD3-215ENST00000496530 UPF3AQ9H1J1 476 aaKnown RBP9.32□□□□□ -0.92
SMARCD3-215ENST00000496530 SH3GLB2Q9NR46 395 aa9.32□□□□□ -0.92
SMARCD3-215ENST00000496530 BARHL2Q9NY43 387 aa9.32□□□□□ -0.92
SMARCD3-215ENST00000496530 TFIP11Q9UBB9 837 aaKnown RBP9.32□□□□□ -0.92
SMARCD3-215ENST00000496530 GNEQ9Y223 722 aaKnown RBP9.32□□□□□ -0.92
SMARCD3-215ENST00000496530 MRVI1Q9Y6F6 885 aa9.32□□□□□ -0.92
SMARCD3-215ENST00000496530 KIAA0100Q14667 2235 aaKnown RBP9.32□□□□□ -0.92
SMARCD3-215ENST00000496530 ASTN1O14525 1302 aa9.31□□□□□ -0.92
SMARCD3-215ENST00000496530 ELP1O95163 1332 aa9.31□□□□□ -0.92
SMARCD3-215ENST00000496530 A0A0U1RQG5 324 aaPredicted RBP9.31□□□□□ -0.92
SMARCD3-215ENST00000496530 A0A1W2PQ45 241 aaPredicted RBP9.31□□□□□ -0.92
SMARCD3-215ENST00000496530 A0A1W2PQY0 241 aa9.31□□□□□ -0.92
SMARCD3-215ENST00000496530 DCDC2CA8MYV0 355 aa9.31□□□□□ -0.92
SMARCD3-215ENST00000496530 BTBD18B2RXH4 712 aa9.31□□□□□ -0.92
SMARCD3-215ENST00000496530 KPNA6O60684 536 aa9.31□□□□□ -0.92
SMARCD3-215ENST00000496530 FOSP01100 380 aaPredicted RBP9.31□□□□□ -0.92
SMARCD3-215ENST00000496530 GH1P01241 217 aa9.31□□□□□ -0.92
SMARCD3-215ENST00000496530 ZSCAN22P10073 491 aaPredicted RBP9.31□□□□□ -0.92
SMARCD3-215ENST00000496530 PDIA4P13667 645 aaKnown RBP9.31□□□□□ -0.92
SMARCD3-215ENST00000496530 NCLP19338 710 aaKnown RBP9.31□□□□□ -0.92
SMARCD3-215ENST00000496530 KRT2P35908 639 aa9.31□□□□□ -0.92
SMARCD3-215ENST00000496530 MNX1P50219 401 aaPredicted RBP9.31□□□□□ -0.92
SMARCD3-215ENST00000496530 ACLYP53396 1101 aa9.31□□□□□ -0.92
SMARCD3-215ENST00000496530 RTP1P59025 263 aa9.31□□□□□ -0.92
SMARCD3-215ENST00000496530 FSCN1Q16658 493 aaKnown RBP9.31□□□□□ -0.92
SMARCD3-215ENST00000496530 USP17L6PQ6QN14 398 aa9.31□□□□□ -0.92
SMARCD3-215ENST00000496530 BLIDQ8IZY5 108 aa9.31□□□□□ -0.92
SMARCD3-215ENST00000496530 KLHDC9Q8NEP7 349 aa9.31□□□□□ -0.92
SMARCD3-215ENST00000496530 FERMT2Q96AC1 680 aa9.31□□□□□ -0.92
SMARCD3-215ENST00000496530 LENG1Q96BZ8 264 aaPredicted RBP9.31□□□□□ -0.92
SMARCD3-215ENST00000496530 CDHR1Q96JP9 859 aa9.31□□□□□ -0.92
SMARCD3-215ENST00000496530 PDGFCQ9NRA1 345 aa9.31□□□□□ -0.92
SMARCD3-215ENST00000496530 TMEM260Q9NX78 707 aa9.31□□□□□ -0.92
SMARCD3-215ENST00000496530 ATP11BQ9Y2G3 1177 aa9.31□□□□□ -0.92
SMARCD3-215ENST00000496530 STK36Q9NRP7 1315 aa9.31□□□□□ -0.92
SMARCD3-215ENST00000496530 CCDC194A0A1B0GVG4 234 aa9.3□□□□□ -0.92
SMARCD3-215ENST00000496530 OPLAHO14841 1288 aa9.3□□□□□ -0.92
SMARCD3-215ENST00000496530 MARCH6O60337 910 aa9.3□□□□□ -0.92
SMARCD3-215ENST00000496530 TGFB3P10600 412 aa9.3□□□□□ -0.92
SMARCD3-215ENST00000496530 ZNF76P36508 570 aa9.3□□□□□ -0.92
SMARCD3-215ENST00000496530 NKX3-2P78367 333 aa9.3□□□□□ -0.92
SMARCD3-215ENST00000496530 CEBPZQ03701 1054 aaKnown RBP9.3□□□□□ -0.92
SMARCD3-215ENST00000496530 AP3B2Q13367 1082 aa9.3□□□□□ -0.92
SMARCD3-215ENST00000496530 PKP1Q13835 747 aa9.3□□□□□ -0.92
SMARCD3-215ENST00000496530 UBE2SQ16763 222 aa9.3□□□□□ -0.92
SMARCD3-215ENST00000496530 LRRC26Q2I0M4 334 aa9.3□□□□□ -0.92
SMARCD3-215ENST00000496530 C1orf53Q5VUE5 145 aa9.3□□□□□ -0.92
SMARCD3-215ENST00000496530 VSIG10LQ86VR7 867 aa9.3□□□□□ -0.92
SMARCD3-215ENST00000496530 DHX37Q8IY37 1157 aaKnown RBP9.3□□□□□ -0.92
SMARCD3-215ENST00000496530 DIS3L2Q8IYB7 885 aaKnown RBP9.3□□□□□ -0.92
SMARCD3-215ENST00000496530 GIMAP8Q8ND71 665 aaPredicted RBP9.3□□□□□ -0.92
SMARCD3-215ENST00000496530 RASGRP4Q8TDF6 673 aa9.3□□□□□ -0.92
SMARCD3-215ENST00000496530 OXER1Q8TDS5 423 aa9.3□□□□□ -0.92
SMARCD3-215ENST00000496530 LBHD1Q9BQE6 289 aaPredicted RBP9.3□□□□□ -0.92
SMARCD3-215ENST00000496530 PHF20Q9BVI0 1012 aa9.3□□□□□ -0.92
SMARCD3-215ENST00000496530 MLXIPQ9HAP2 919 aa9.3□□□□□ -0.92
SMARCD3-215ENST00000496530 RIC8AQ9NPQ8 531 aa9.3□□□□□ -0.92
SMARCD3-215ENST00000496530 COL20A1Q9P218 1284 aa9.3□□□□□ -0.92
SMARCD3-215ENST00000496530 PCDHA4Q9UN74 947 aa9.3□□□□□ -0.92
SMARCD3-215ENST00000496530 KIAA1217Q5T5P2 1943 aa9.3□□□□□ -0.92
SMARCD3-215ENST00000496530 MEIS2O14770 477 aa9.29□□□□□ -0.92
SMARCD3-215ENST00000496530 MAFGO15525 162 aa9.29□□□□□ -0.92
SMARCD3-215ENST00000496530 FIBPO43427 364 aa9.29□□□□□ -0.92
SMARCD3-215ENST00000496530 MMP1P03956 469 aa9.29□□□□□ -0.92
SMARCD3-215ENST00000496530 MYL3P08590 195 aa9.29□□□□□ -0.92
SMARCD3-215ENST00000496530 BEX3Q00994 111 aa9.29□□□□□ -0.92
SMARCD3-215ENST00000496530 NR5A1Q13285 461 aa9.29□□□□□ -0.92
SMARCD3-215ENST00000496530 LAMC2Q13753 1193 aa9.29□□□□□ -0.92
SMARCD3-215ENST00000496530 NEDD9Q14511 834 aa9.29□□□□□ -0.92
SMARCD3-215ENST00000496530 DGKDQ16760 1214 aa9.29□□□□□ -0.92
SMARCD3-215ENST00000496530 PCNX4Q63HM2 1172 aa9.29□□□□□ -0.92
SMARCD3-215ENST00000496530 GALNT17Q6IS24 598 aa9.29□□□□□ -0.92
SMARCD3-215ENST00000496530 PIK3AP1Q6ZUJ8 805 aa9.29□□□□□ -0.92
SMARCD3-215ENST00000496530 FAM177A1Q8N128 213 aaPredicted RBP9.29□□□□□ -0.92
SMARCD3-215ENST00000496530 PGBD1Q96JS3 809 aa9.29□□□□□ -0.92
SMARCD3-215ENST00000496530 KATNAL1Q9BW62 490 aa9.29□□□□□ -0.92
SMARCD3-215ENST00000496530 ZSCAN16Q9H4T2 348 aaPredicted RBP9.29□□□□□ -0.92
SMARCD3-215ENST00000496530 PRDM5Q9NQX1 630 aaPredicted RBP9.29□□□□□ -0.92
SMARCD3-215ENST00000496530 PCDHA6Q9UN73 950 aa9.29□□□□□ -0.92
SMARCD3-215ENST00000496530 MTMR6Q9Y217 621 aa9.29□□□□□ -0.92
SMARCD3-215ENST00000496530 PCDHA8Q9Y5H6 950 aa9.29□□□□□ -0.92
SMARCD3-215ENST00000496530 DDX49Q9Y6V7 483 aaKnown RBP9.29□□□□□ -0.92
SMARCD3-215ENST00000496530 FRMPD4Q14CM0 1322 aa9.29□□□□□ -0.92
SMARCD3-215ENST00000496530 ESYT2A0FGR8 921 aa9.28□□□□□ -0.92
SMARCD3-215ENST00000496530 MYADML2A6NDP7 307 aa9.28□□□□□ -0.92
SMARCD3-215ENST00000496530 H0YGN5 161 aa9.28□□□□□ -0.92
SMARCD3-215ENST00000496530 ARVCFO00192 962 aa9.28□□□□□ -0.92
SMARCD3-215ENST00000496530 NOP56O00567 594 aaKnown RBP9.28□□□□□ -0.92
SMARCD3-215ENST00000496530 ADAMTS3O15072 1205 aa9.28□□□□□ -0.92
SMARCD3-215ENST00000496530 ADCY6O43306 1168 aa9.28□□□□□ -0.92
SMARCD3-215ENST00000496530 PQBP1O60828 265 aaKnown RBP9.28□□□□□ -0.92
SMARCD3-215ENST00000496530 CLTBP09497 229 aa9.28□□□□□ -0.92
SMARCD3-215ENST00000496530 SNX17Q15036 470 aa9.28□□□□□ -0.92
SMARCD3-215ENST00000496530 ZNF174Q15697 407 aa9.28□□□□□ -0.92
SMARCD3-215ENST00000496530 LY6KQ17RY6 165 aa9.28□□□□□ -0.92
SMARCD3-215ENST00000496530 TRIM60Q495X7 471 aa9.28□□□□□ -0.92
SMARCD3-215ENST00000496530 CCSAPQ6IQ19 270 aaPredicted RBP9.28□□□□□ -0.92
SMARCD3-215ENST00000496530 TYW1BQ6NUM6 668 aa9.28□□□□□ -0.92
SMARCD3-215ENST00000496530 FAM173BQ6P4H8 233 aa9.28□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms