RNA–Protein interactions for RNA: ENST00000496144.5

VPS13B-206, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 5

Gene VPS13B, Length 5,625 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-206ENST00000496144 MYSM1Q5VVJ2 828 aa9.63□□□□□ -0.87
VPS13B-206ENST00000496144 ZNF710Q8N1W2 664 aa9.63□□□□□ -0.87
VPS13B-206ENST00000496144 MAP3K14Q99558 947 aa9.63□□□□□ -0.87
VPS13B-206ENST00000496144 TRPC6Q9Y210 931 aa9.63□□□□□ -0.87
VPS13B-206ENST00000496144 PCDHA1Q9Y5I3 950 aa9.63□□□□□ -0.87
VPS13B-206ENST00000496144 UTP14CQ5TAP6 766 aaKnown RBP9.63□□□□□ -0.87
VPS13B-206ENST00000496144 FMR1NBQ8N0W7 255 aaPredicted RBP9.63□□□□□ -0.87
VPS13B-206ENST00000496144 ZNF384Q8TF68 577 aa9.63□□□□□ -0.87
VPS13B-206ENST00000496144 COLQQ9Y215 455 aaPredicted RBP9.63□□□□□ -0.87
VPS13B-206ENST00000496144 STX1AQ16623 288 aa9.62□□□□□ -0.87
VPS13B-206ENST00000496144 MRPS27Q92552 414 aaKnown RBP9.62□□□□□ -0.87
VPS13B-206ENST00000496144 CCDC73Q6ZRK6 1079 aa9.62□□□□□ -0.87
VPS13B-206ENST00000496144 MICU3Q86XE3 530 aa9.62□□□□□ -0.87
VPS13B-206ENST00000496144 PLA2G4DQ86XP0 818 aa9.62□□□□□ -0.87
VPS13B-206ENST00000496144 CCDC144CPQ8IYA2 1237 aa9.62□□□□□ -0.87
VPS13B-206ENST00000496144 PTMAP06454 111 aaKnown RBP9.62□□□□□ -0.87
VPS13B-206ENST00000496144 U2AF2P26368 475 aaKnown RBP eCLIP9.62□□□□□ -0.871e-6■■■■□ 25.1
VPS13B-206ENST00000496144 SP4Q02446 784 aa9.62□□□□□ -0.87
VPS13B-206ENST00000496144 CCL14Q16627 93 aa9.62□□□□□ -0.87
VPS13B-206ENST00000496144 FSIP1Q8NA03 581 aa9.62□□□□□ -0.87
VPS13B-206ENST00000496144 SEPT8Q92599 483 aa9.62□□□□□ -0.87
VPS13B-206ENST00000496144 MAP7D2Q96T17 732 aa9.62□□□□□ -0.87
VPS13B-206ENST00000496144 RMDN3Q96TC7 470 aa9.62□□□□□ -0.87
VPS13B-206ENST00000496144 HIPK3Q9H422 1215 aa9.62□□□□□ -0.87
VPS13B-206ENST00000496144 PGK1P00558 417 aa9.62□□□□□ -0.87
VPS13B-206ENST00000496144 ME1P48163 572 aa9.62□□□□□ -0.87
VPS13B-206ENST00000496144 DNM2P50570 870 aa9.62□□□□□ -0.87
VPS13B-206ENST00000496144 KRT40Q6A162 431 aa9.62□□□□□ -0.87
VPS13B-206ENST00000496144 ZBTB33Q86T24 672 aa9.62□□□□□ -0.87
VPS13B-206ENST00000496144 HACE1Q8IYU2 909 aa9.62□□□□□ -0.87
VPS13B-206ENST00000496144 PHKBQ93100 1093 aa9.62□□□□□ -0.87
VPS13B-206ENST00000496144 ZKSCAN3Q9BRR0 538 aa9.62□□□□□ -0.87
VPS13B-206ENST00000496144 MYL10Q9BUA6 226 aa9.62□□□□□ -0.87
VPS13B-206ENST00000496144 PPP6R2O75170 966 aa9.62□□□□□ -0.87
VPS13B-206ENST00000496144 OFD1O75665 1012 aa9.62□□□□□ -0.87
VPS13B-206ENST00000496144 DDAH1O94760 285 aa9.62□□□□□ -0.87
VPS13B-206ENST00000496144 CAVIN2O95810 425 aa9.62□□□□□ -0.87
VPS13B-206ENST00000496144 CDC25BP30305 580 aa9.62□□□□□ -0.87
VPS13B-206ENST00000496144 SLC16A2P36021 539 aa9.62□□□□□ -0.87
VPS13B-206ENST00000496144 TRIM60Q495X7 471 aa9.62□□□□□ -0.87
VPS13B-206ENST00000496144 PDZRN4Q6ZMN7 1036 aaPredicted RBP9.62□□□□□ -0.87
VPS13B-206ENST00000496144 GJB4Q9NTQ9 266 aa9.62□□□□□ -0.87
VPS13B-206ENST00000496144 STAM2O75886 525 aa9.61□□□□□ -0.87
VPS13B-206ENST00000496144 MAGEA10P43363 369 aaPredicted RBP9.61□□□□□ -0.87
VPS13B-206ENST00000496144 TLE2Q04725 743 aa9.61□□□□□ -0.87
VPS13B-206ENST00000496144 LRRC41Q15345 812 aa9.61□□□□□ -0.87
VPS13B-206ENST00000496144 LUZP1Q86V48 1076 aa9.61□□□□□ -0.87
VPS13B-206ENST00000496144 PRR12Q9ULL5 1215 aa9.61□□□□□ -0.87
VPS13B-206ENST00000496144 SPTLC2O15270 562 aa9.61□□□□□ -0.87
VPS13B-206ENST00000496144 CLSTN1O94985 981 aa9.61□□□□□ -0.87
VPS13B-206ENST00000496144 TPM3P06753 285 aa9.61□□□□□ -0.87
VPS13B-206ENST00000496144 GNA11P29992 359 aa9.61□□□□□ -0.87
VPS13B-206ENST00000496144 BAATQ14032 418 aaPredicted RBP9.61□□□□□ -0.87
VPS13B-206ENST00000496144 DHX40Q8IX18 779 aaKnown RBP9.61□□□□□ -0.87
VPS13B-206ENST00000496144 ABI1Q8IZP0 508 aa9.61□□□□□ -0.87
VPS13B-206ENST00000496144 AIFM3Q96NN9 605 aa9.61□□□□□ -0.87
VPS13B-206ENST00000496144 BTBD7Q9P203 1132 aa9.61□□□□□ -0.87
VPS13B-206ENST00000496144 STK38Q15208 465 aa9.61□□□□□ -0.87
VPS13B-206ENST00000496144 SEC23AQ15436 765 aa9.61□□□□□ -0.87
VPS13B-206ENST00000496144 PRAMEF19Q5SWL8 479 aa9.61□□□□□ -0.87
VPS13B-206ENST00000496144 PPP2R2DQ66LE6 453 aa9.61□□□□□ -0.87
VPS13B-206ENST00000496144 SPATA33Q96N06 139 aa9.61□□□□□ -0.87
VPS13B-206ENST00000496144 AAASQ9NRG9 546 aa9.61□□□□□ -0.87
VPS13B-206ENST00000496144 TMOD1P28289 359 aa9.61□□□□□ -0.87
VPS13B-206ENST00000496144 PTPN11Q06124 597 aaPredicted RBP9.61□□□□□ -0.87
VPS13B-206ENST00000496144 KCNA10Q16322 511 aa9.61□□□□□ -0.87
VPS13B-206ENST00000496144 RTN1Q16799 776 aa9.61□□□□□ -0.87
VPS13B-206ENST00000496144 ARHGAP30Q7Z6I6 1101 aaPredicted RBP9.61□□□□□ -0.87
VPS13B-206ENST00000496144 RASSF8Q8NHQ8 419 aa9.61□□□□□ -0.87
VPS13B-206ENST00000496144 GNL3Q9BVP2 549 aaKnown RBP eCLIP9.61□□□□□ -0.87
VPS13B-206ENST00000496144 PAK6Q9NQU5 681 aaPredicted RBP9.61□□□□□ -0.87
VPS13B-206ENST00000496144 KLRF2D3W0D1 207 aa9.6□□□□□ -0.87
VPS13B-206ENST00000496144 ARVCFO00192 962 aa9.6□□□□□ -0.87
VPS13B-206ENST00000496144 NDUFA8P51970 172 aa9.6□□□□□ -0.87
VPS13B-206ENST00000496144 SLC26A6Q9BXS9 759 aa9.6□□□□□ -0.87
VPS13B-206ENST00000496144 DNAJC25Q9H1X3 360 aa9.6□□□□□ -0.87
VPS13B-206ENST00000496144 TCP11L1Q9NUJ3 509 aa9.6□□□□□ -0.87
VPS13B-206ENST00000496144 C17orf102A2RUQ5 167 aa9.6□□□□□ -0.87
VPS13B-206ENST00000496144 FOSP01100 380 aaPredicted RBP9.6□□□□□ -0.87
VPS13B-206ENST00000496144 MMP1P03956 469 aa9.6□□□□□ -0.87
VPS13B-206ENST00000496144 IFNAR1P17181 557 aa9.6□□□□□ -0.87
VPS13B-206ENST00000496144 TMEM132BQ14DG7 1078 aa9.6□□□□□ -0.87
VPS13B-206ENST00000496144 C11orf57Q6ZUT1 292 aaPredicted RBP9.6□□□□□ -0.87
VPS13B-206ENST00000496144 KRI1Q8N9T8 703 aaKnown RBP9.6□□□□□ -0.87
VPS13B-206ENST00000496144 Q9Y3F1 56 aa9.6□□□□□ -0.87
VPS13B-206ENST00000496144 SSC5DA1L4H1 1573 aa9.6□□□□□ -0.87
VPS13B-206ENST00000496144 hCG_1984214I3L0E3 225 aa9.6□□□□□ -0.87
VPS13B-206ENST00000496144 KINO60870 393 aaKnown RBP9.6□□□□□ -0.87
VPS13B-206ENST00000496144 ZNF713Q8N859 430 aaPredicted RBP9.6□□□□□ -0.87
VPS13B-206ENST00000496144 PLA2G6O60733 806 aa9.6□□□□□ -0.87
VPS13B-206ENST00000496144 STAG3L1P0CL83 205 aa9.6□□□□□ -0.87
VPS13B-206ENST00000496144 ACLYP53396 1101 aa9.6□□□□□ -0.87
VPS13B-206ENST00000496144 IKBKEQ14164 716 aa9.6□□□□□ -0.87
VPS13B-206ENST00000496144 SLC39A14Q15043 492 aa9.6□□□□□ -0.87
VPS13B-206ENST00000496144 PTPAQ15257 358 aa9.6□□□□□ -0.87
VPS13B-206ENST00000496144 CAGE1Q8TC20 777 aa9.6□□□□□ -0.87
VPS13B-206ENST00000496144 BADQ92934 168 aa9.6□□□□□ -0.87
VPS13B-206ENST00000496144 TMEM47Q9BQJ4 181 aa9.6□□□□□ -0.87
VPS13B-206ENST00000496144 ADCY7P51828 1080 aa9.59□□□□□ -0.87
VPS13B-206ENST00000496144 CCDC144BQ3MJ40 725 aa9.59□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms