RNA–Protein interactions for RNA: ENST00000496071.5

COMMD3-214, Transcript of COMM domain containing 3, humanhuman

TSL 5

Gene COMMD3, Length 1,150 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3-214ENST00000496071 GPR153Q6NV75 609 aa19.58■□□□□ 0.72
COMMD3-214ENST00000496071 GLT8D2Q9H1C3 349 aa19.58■□□□□ 0.72
COMMD3-214ENST00000496071 TRPV6Q9H1D0 765 aa19.58■□□□□ 0.72
COMMD3-214ENST00000496071 EHMT1Q9H9B1 1298 aa19.58■□□□□ 0.72
COMMD3-214ENST00000496071 MLXIPQ9HAP2 919 aa19.58■□□□□ 0.72
COMMD3-214ENST00000496071 SPATA31C2B4DYI2 1134 aa19.57■□□□□ 0.72
COMMD3-214ENST00000496071 SOX1O00570 391 aaPredicted RBP19.57■□□□□ 0.72
COMMD3-214ENST00000496071 FIBPO43427 364 aa19.57■□□□□ 0.72
COMMD3-214ENST00000496071 PPFIA4O75335 1185 aa19.57■□□□□ 0.72
COMMD3-214ENST00000496071 GGPS1O95749 300 aa19.57■□□□□ 0.72
COMMD3-214ENST00000496071 PPIGQ13427 754 aaKnown RBP eCLIP19.57■□□□□ 0.72
COMMD3-214ENST00000496071 NEDD9Q14511 834 aa19.57■□□□□ 0.72
COMMD3-214ENST00000496071 FAM47CQ5HY64 1035 aa19.57■□□□□ 0.72
COMMD3-214ENST00000496071 NLRX1Q86UT6 975 aa19.57■□□□□ 0.72
COMMD3-214ENST00000496071 ZFP91Q96JP5 570 aaPredicted RBP19.57■□□□□ 0.72
COMMD3-214ENST00000496071 SPATA33Q96N06 139 aa19.57■□□□□ 0.72
COMMD3-214ENST00000496071 KATNAL1Q9BW62 490 aa19.57■□□□□ 0.72
COMMD3-214ENST00000496071 PPP1R12CQ9BZL4 782 aa19.57■□□□□ 0.72
COMMD3-214ENST00000496071 HIPK3Q9H422 1215 aa19.57■□□□□ 0.72
COMMD3-214ENST00000496071 RIC8AQ9NPQ8 531 aa19.57■□□□□ 0.72
COMMD3-214ENST00000496071 BARHL2Q9NY43 387 aa19.57■□□□□ 0.72
COMMD3-214ENST00000496071 RANBP2P49792 3224 aaKnown RBP19.56■□□□□ 0.72
COMMD3-214ENST00000496071 FOSP01100 380 aaPredicted RBP19.56■□□□□ 0.72
COMMD3-214ENST00000496071 UBA1P22314 1058 aaKnown RBP19.56■□□□□ 0.72
COMMD3-214ENST00000496071 SP2Q02086 613 aa19.56■□□□□ 0.72
COMMD3-214ENST00000496071 LRCH3Q96II8 777 aa19.56■□□□□ 0.72
COMMD3-214ENST00000496071 RTEL1Q9NZ71 1219 aa19.56■□□□□ 0.72
COMMD3-214ENST00000496071 PCDHA6Q9UN73 950 aa19.56■□□□□ 0.72
COMMD3-214ENST00000496071 PCDHA8Q9Y5H6 950 aa19.56■□□□□ 0.72
COMMD3-214ENST00000496071 SMCO2A6NFE2 343 aa19.55■□□□□ 0.72
COMMD3-214ENST00000496071 STXBP3O00186 592 aa19.55■□□□□ 0.72
COMMD3-214ENST00000496071 PRPF3O43395 683 aaKnown RBP19.55■□□□□ 0.72
COMMD3-214ENST00000496071 HOXD8P13378 290 aaPredicted RBP19.55■□□□□ 0.72
COMMD3-214ENST00000496071 PDIA3P30101 505 aaKnown RBP19.55■□□□□ 0.72
COMMD3-214ENST00000496071 ADCY7P51828 1080 aa19.55■□□□□ 0.72
COMMD3-214ENST00000496071 AKAP17AQ02040 695 aaKnown RBP19.55■□□□□ 0.72
COMMD3-214ENST00000496071 UBE2SQ16763 222 aa19.55■□□□□ 0.72
COMMD3-214ENST00000496071 PFKFB3Q16875 520 aaPredicted RBP19.55■□□□□ 0.72
COMMD3-214ENST00000496071 C9orf50Q5SZB4 431 aa19.55■□□□□ 0.72
COMMD3-214ENST00000496071 SESTD1Q86VW0 696 aa19.55■□□□□ 0.72
COMMD3-214ENST00000496071 GIMAP8Q8ND71 665 aaPredicted RBP19.55■□□□□ 0.72
COMMD3-214ENST00000496071 CDHR1Q96JP9 859 aa19.55■□□□□ 0.72
COMMD3-214ENST00000496071 SENP7Q9BQF6 1050 aa19.55■□□□□ 0.72
COMMD3-214ENST00000496071 MAFGO15525 162 aa19.54■□□□□ 0.72
COMMD3-214ENST00000496071 SCG2P13521 617 aa19.54■□□□□ 0.72
COMMD3-214ENST00000496071 CYP2C18P33260 490 aa19.54■□□□□ 0.72
COMMD3-214ENST00000496071 TOB2Q14106 344 aaPredicted RBP19.54■□□□□ 0.72
COMMD3-214ENST00000496071 HSDL1Q3SXM5 330 aa19.54■□□□□ 0.72
COMMD3-214ENST00000496071 CCDC12Q8WUD4 166 aaPredicted RBP19.54■□□□□ 0.72
COMMD3-214ENST00000496071 KAT2BQ92831 832 aa19.54■□□□□ 0.72
COMMD3-214ENST00000496071 GPRASP2Q96D09 838 aa19.54■□□□□ 0.72
COMMD3-214ENST00000496071 ZNF274Q96GC6 653 aaPredicted RBP19.54■□□□□ 0.72
COMMD3-214ENST00000496071 NOC4LQ9BVI4 516 aaKnown RBP19.54■□□□□ 0.72
COMMD3-214ENST00000496071 TRMT13Q9NUP7 481 aaKnown RBP19.54■□□□□ 0.72
COMMD3-214ENST00000496071 F2P00734 622 aa19.53■□□□□ 0.72
COMMD3-214ENST00000496071 CSF2RAP15509 400 aa19.53■□□□□ 0.72
COMMD3-214ENST00000496071 PSEN2P49810 448 aa19.53■□□□□ 0.72
COMMD3-214ENST00000496071 EPHB4P54760 987 aa19.53■□□□□ 0.72
COMMD3-214ENST00000496071 CHMP4BP1P59074 171 aa19.53■□□□□ 0.72
COMMD3-214ENST00000496071 ANAPC15P60006 121 aa19.53■□□□□ 0.72
COMMD3-214ENST00000496071 MCTP2Q6DN12 878 aa19.53■□□□□ 0.72
COMMD3-214ENST00000496071 TYW1BQ6NUM6 668 aa19.53■□□□□ 0.72
COMMD3-214ENST00000496071 METTL7BQ6UX53 244 aa19.53■□□□□ 0.72
COMMD3-214ENST00000496071 RNF26Q9BY78 433 aaPredicted RBP19.53■□□□□ 0.72
COMMD3-214ENST00000496071 PDRG1Q9NUG6 133 aa19.53■□□□□ 0.72
COMMD3-214ENST00000496071 NOD1Q9Y239 953 aa19.53■□□□□ 0.72
COMMD3-214ENST00000496071 HAS3O00219 553 aa19.52■□□□□ 0.72
COMMD3-214ENST00000496071 NOP56O00567 594 aaKnown RBP19.52■□□□□ 0.72
COMMD3-214ENST00000496071 IFNAR1P17181 557 aa19.52■□□□□ 0.72
COMMD3-214ENST00000496071 SEMA3FQ13275 785 aa19.52■□□□□ 0.72
COMMD3-214ENST00000496071 AP3B2Q13367 1082 aa19.52■□□□□ 0.72
COMMD3-214ENST00000496071 NTRK3Q16288 839 aa19.52■□□□□ 0.72
COMMD3-214ENST00000496071 CYFIP1Q7L576 1253 aa19.52■□□□□ 0.72
COMMD3-214ENST00000496071 RPUSD2Q8IZ73 545 aaKnown RBP19.52■□□□□ 0.72
COMMD3-214ENST00000496071 C7orf31Q8N865 590 aa19.52■□□□□ 0.72
COMMD3-214ENST00000496071 RNPC3Q96LT9 517 aaKnown RBP19.52■□□□□ 0.72
COMMD3-214ENST00000496071 UPF3BQ9BZI7 483 aaKnown RBP19.52■□□□□ 0.72
COMMD3-214ENST00000496071 IL23AQ9NPF7 189 aa19.52■□□□□ 0.72
COMMD3-214ENST00000496071 UBIAD1Q9Y5Z9 338 aa19.52■□□□□ 0.72
COMMD3-214ENST00000496071 ESYT2A0FGR8 921 aa19.51■□□□□ 0.71
COMMD3-214ENST00000496071 SORBS3O60504 671 aa19.51■□□□□ 0.71
COMMD3-214ENST00000496071 CYP2C9P11712 490 aa19.51■□□□□ 0.71
COMMD3-214ENST00000496071 CCT2P78371 535 aaKnown RBP19.51■□□□□ 0.71
COMMD3-214ENST00000496071 MFSD10Q14728 455 aa19.51■□□□□ 0.71
COMMD3-214ENST00000496071 PTGISQ16647 500 aa19.51■□□□□ 0.71
COMMD3-214ENST00000496071 KIAA0753Q2KHM9 967 aa19.51■□□□□ 0.71
COMMD3-214ENST00000496071 PSRC1Q6PGN9 363 aaPredicted RBP19.51■□□□□ 0.71
COMMD3-214ENST00000496071 BUD13Q9BRD0 619 aaKnown RBP eCLIP19.51■□□□□ 0.71
COMMD3-214ENST00000496071 ALG1Q9BT22 464 aa19.51■□□□□ 0.71
COMMD3-214ENST00000496071 C6orf50Q9HD87 102 aa19.51■□□□□ 0.71
COMMD3-214ENST00000496071 JADE2Q9NQC1 790 aa19.51■□□□□ 0.71
COMMD3-214ENST00000496071 DOCK5Q9H7D0 1870 aa19.5■□□□□ 0.71
COMMD3-214ENST00000496071 ZNF286BP0CG31 522 aa19.5■□□□□ 0.71
COMMD3-214ENST00000496071 ITGB5P18084 799 aa19.5■□□□□ 0.71
COMMD3-214ENST00000496071 GNA11P29992 359 aa19.5■□□□□ 0.71
COMMD3-214ENST00000496071 CLK2P49760 499 aaKnown RBP19.5■□□□□ 0.71
COMMD3-214ENST00000496071 CCL23P55773 120 aa19.5■□□□□ 0.71
COMMD3-214ENST00000496071 BFSP2Q13515 415 aa19.5■□□□□ 0.71
COMMD3-214ENST00000496071 MTMR1Q13613 665 aa19.5■□□□□ 0.71
COMMD3-214ENST00000496071 PKN1Q16512 942 aa19.5■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms