RNA–Protein interactions for RNA: ENST00000496030.1

APTX-233, Transcript of aprataxin, humanhuman

TSL 3

Gene APTX, Length 633 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-233ENST00000496030 SEPT4O43236 478 aa13.61□□□□□ -0.23
APTX-233ENST00000496030 EIF3JO75822 258 aaKnown RBP13.61□□□□□ -0.23
APTX-233ENST00000496030 FOSP01100 380 aaPredicted RBP13.61□□□□□ -0.23
APTX-233ENST00000496030 EPHB4P54760 987 aa13.61□□□□□ -0.23
APTX-233ENST00000496030 HMGN5P82970 282 aaKnown RBP13.61□□□□□ -0.23
APTX-233ENST00000496030 PDE4DQ08499 809 aa13.61□□□□□ -0.23
APTX-233ENST00000496030 STXBP2Q15833 593 aa13.61□□□□□ -0.23
APTX-233ENST00000496030 CCDC144BQ3MJ40 725 aa13.61□□□□□ -0.23
APTX-233ENST00000496030 PCNX4Q63HM2 1172 aa13.61□□□□□ -0.23
APTX-233ENST00000496030 KRT40Q6A162 431 aa13.61□□□□□ -0.23
APTX-233ENST00000496030 GALNT17Q6IS24 598 aa13.61□□□□□ -0.23
APTX-233ENST00000496030 CCDC62Q6P9F0 684 aa13.61□□□□□ -0.23
APTX-233ENST00000496030 FBXO16Q8IX29 292 aaPredicted RBP13.61□□□□□ -0.23
APTX-233ENST00000496030 BLIDQ8IZY5 108 aa13.61□□□□□ -0.23
APTX-233ENST00000496030 REXO1Q8N1G1 1221 aaKnown RBP13.61□□□□□ -0.23
APTX-233ENST00000496030 ANO3Q9BYT9 981 aa13.61□□□□□ -0.23
APTX-233ENST00000496030 MYH7BA7E2Y1 1941 aa13.6□□□□□ -0.23
APTX-233ENST00000496030 C11orf97A0A1B0GVM6 126 aaPredicted RBP13.6□□□□□ -0.23
APTX-233ENST00000496030 TRIM43BA6NCK2 446 aa13.6□□□□□ -0.23
APTX-233ENST00000496030 SPDYE3A6NKU9 549 aa13.6□□□□□ -0.23
APTX-233ENST00000496030 DNM1LO00429 736 aa13.6□□□□□ -0.23
APTX-233ENST00000496030 MYCLP12524 364 aaPredicted RBP13.6□□□□□ -0.23
APTX-233ENST00000496030 PTGS1P23219 599 aa13.6□□□□□ -0.23
APTX-233ENST00000496030 ITGB8P26012 769 aa13.6□□□□□ -0.23
APTX-233ENST00000496030 SREBF1P36956 1147 aa13.6□□□□□ -0.23
APTX-233ENST00000496030 ADCYAP1R1P41586 468 aa13.6□□□□□ -0.23
APTX-233ENST00000496030 AP3B2Q13367 1082 aa13.6□□□□□ -0.23
APTX-233ENST00000496030 TRIM60Q495X7 471 aa13.6□□□□□ -0.23
APTX-233ENST00000496030 GJC2Q5T442 439 aaPredicted RBP13.6□□□□□ -0.23
APTX-233ENST00000496030 FBXO18Q8NFZ0 1043 aa13.6□□□□□ -0.23
APTX-233ENST00000496030 BICD2Q8TD16 824 aa13.6□□□□□ -0.23
APTX-233ENST00000496030 TNFRSF25Q93038 417 aa13.6□□□□□ -0.23
APTX-233ENST00000496030 TRIM43Q96BQ3 446 aaPredicted RBP13.6□□□□□ -0.23
APTX-233ENST00000496030 LENG1Q96BZ8 264 aaPredicted RBP13.6□□□□□ -0.23
APTX-233ENST00000496030 PDLIM7Q9NR12 457 aa13.6□□□□□ -0.23
APTX-233ENST00000496030 ZHX1Q9UKY1 873 aaPredicted RBP13.6□□□□□ -0.23
APTX-233ENST00000496030 B4DLN1 442 aa13.59□□□□□ -0.23
APTX-233ENST00000496030 ARIH2O95376 493 aa13.59□□□□□ -0.23
APTX-233ENST00000496030 MMP1P03956 469 aa13.59□□□□□ -0.23
APTX-233ENST00000496030 SMPD1P17405 629 aa13.59□□□□□ -0.23
APTX-233ENST00000496030 GJB2P29033 226 aa13.59□□□□□ -0.23
APTX-233ENST00000496030 CNGA1P29973 690 aa13.59□□□□□ -0.23
APTX-233ENST00000496030 CCND2P30279 289 aa13.59□□□□□ -0.23
APTX-233ENST00000496030 FOSBP53539 338 aa13.59□□□□□ -0.23
APTX-233ENST00000496030 SEMA3FQ13275 785 aa13.59□□□□□ -0.23
APTX-233ENST00000496030 EARS2Q5JPH6 523 aaKnown RBP13.59□□□□□ -0.23
APTX-233ENST00000496030 ANO1Q5XXA6 986 aa13.59□□□□□ -0.23
APTX-233ENST00000496030 MCTP2Q6DN12 878 aa13.59□□□□□ -0.23
APTX-233ENST00000496030 IQSEC1Q6DN90 963 aa13.59□□□□□ -0.23
APTX-233ENST00000496030 XRRA1Q6P2D8 792 aa13.59□□□□□ -0.23
APTX-233ENST00000496030 SLC39A5Q6ZMH5 540 aa13.59□□□□□ -0.23
APTX-233ENST00000496030 INTS4Q96HW7 963 aaKnown RBP13.59□□□□□ -0.23
APTX-233ENST00000496030 INPP4AQ96PE3 977 aaPredicted RBP13.59□□□□□ -0.23
APTX-233ENST00000496030 MPHOSPH6Q99547 160 aaKnown RBP13.59□□□□□ -0.23
APTX-233ENST00000496030 FAM184BQ9ULE4 1060 aa13.59□□□□□ -0.23
APTX-233ENST00000496030 GNEQ9Y223 722 aaKnown RBP13.59□□□□□ -0.23
APTX-233ENST00000496030 UBIAD1Q9Y5Z9 338 aa13.59□□□□□ -0.23
APTX-233ENST00000496030 CTAGE5O15320 804 aa13.58□□□□□ -0.24
APTX-233ENST00000496030 CYP3A4P08684 503 aa13.58□□□□□ -0.24
APTX-233ENST00000496030 AKR1A1P14550 325 aa13.58□□□□□ -0.24
APTX-233ENST00000496030 XBP1P17861 261 aa13.58□□□□□ -0.24
APTX-233ENST00000496030 ITGB5P18084 799 aa13.58□□□□□ -0.24
APTX-233ENST00000496030 ARHGAP4P98171 946 aa13.58□□□□□ -0.24
APTX-233ENST00000496030 GUCY1B3Q02153 619 aa13.58□□□□□ -0.24
APTX-233ENST00000496030 TNFAIP2Q03169 654 aa13.58□□□□□ -0.24
APTX-233ENST00000496030 NR5A1Q13285 461 aa13.58□□□□□ -0.24
APTX-233ENST00000496030 SEPT14Q6ZU15 432 aa13.58□□□□□ -0.24
APTX-233ENST00000496030 CYP2W1Q8TAV3 490 aa13.58□□□□□ -0.24
APTX-233ENST00000496030 ADAMTS19Q8TE59 1207 aa13.58□□□□□ -0.24
APTX-233ENST00000496030 PPM1EQ8WY54 764 aa13.58□□□□□ -0.24
APTX-233ENST00000496030 C8orf76Q96K31 380 aa13.58□□□□□ -0.24
APTX-233ENST00000496030 RNPC3Q96LT9 517 aaKnown RBP13.58□□□□□ -0.24
APTX-233ENST00000496030 WDR11Q9BZH6 1224 aa13.58□□□□□ -0.24
APTX-233ENST00000496030 RTEL1Q9NZ71 1219 aa13.58□□□□□ -0.24
APTX-233ENST00000496030 ZSCAN21Q9Y5A6 473 aaPredicted RBP13.58□□□□□ -0.24
APTX-233ENST00000496030 TCF20Q9UGU0 1960 aaKnown RBP13.58□□□□□ -0.24
APTX-233ENST00000496030 CHD7Q9P2D1 2997 aa13.57□□□□□ -0.24
APTX-233ENST00000496030 FAM205CA6NFA0 338 aa13.57□□□□□ -0.24
APTX-233ENST00000496030 BTBD18B2RXH4 712 aa13.57□□□□□ -0.24
APTX-233ENST00000496030 SPATA31C2B4DYI2 1134 aa13.57□□□□□ -0.24
APTX-233ENST00000496030 DUSP11O75319 330 aaKnown RBP13.57□□□□□ -0.24
APTX-233ENST00000496030 STAM2O75886 525 aa13.57□□□□□ -0.24
APTX-233ENST00000496030 DNAJB2P25686 324 aa13.57□□□□□ -0.24
APTX-233ENST00000496030 ICAM3P32942 547 aa13.57□□□□□ -0.24
APTX-233ENST00000496030 NKX3-2P78367 333 aa13.57□□□□□ -0.24
APTX-233ENST00000496030 IRX5P78411 483 aaPredicted RBP13.57□□□□□ -0.24
APTX-233ENST00000496030 SP2Q02086 613 aa13.57□□□□□ -0.24
APTX-233ENST00000496030 SNX17Q15036 470 aa13.57□□□□□ -0.24
APTX-233ENST00000496030 DUSP28Q4G0W2 176 aa13.57□□□□□ -0.24
APTX-233ENST00000496030 DIS3L2Q8IYB7 885 aaKnown RBP13.57□□□□□ -0.24
APTX-233ENST00000496030 FAM184AQ8NB25 1140 aa13.57□□□□□ -0.24
APTX-233ENST00000496030 SCFD2Q8WU76 684 aa13.57□□□□□ -0.24
APTX-233ENST00000496030 ASB2Q96Q27 587 aa13.57□□□□□ -0.24
APTX-233ENST00000496030 BCAS3Q9H6U6 928 aa13.57□□□□□ -0.24
APTX-233ENST00000496030 DDX41Q9UJV9 622 aaKnown RBP13.57□□□□□ -0.24
APTX-233ENST00000496030 SMC3Q9UQE7 1217 aa13.57□□□□□ -0.24
APTX-233ENST00000496030 XIRP2A4UGR9 3374 aa13.57□□□□□ -0.24
APTX-233ENST00000496030 IGLV3-22A0A075B6J6 115 aa13.56□□□□□ -0.24
APTX-233ENST00000496030 FAM86B1E9PN63 330 aa13.56□□□□□ -0.24
APTX-233ENST00000496030 MEIS1O00470 390 aa13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms