RNA–Protein interactions for RNA: ENST00000494800.1

HDAC4-211, Transcript of histone deacetylase 4, humanhuman

TSL 5

Gene HDAC4, Length 451 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-211ENST00000494800 ALDH8A1Q9H2A2 487 aaPredicted RBP20.23■□□□□ 0.83
HDAC4-211ENST00000494800 RTEL1Q9NZ71 1219 aa20.23■□□□□ 0.83
HDAC4-211ENST00000494800 PCDHA6Q9UN73 950 aa20.23■□□□□ 0.83
HDAC4-211ENST00000494800 PCDHA8Q9Y5H6 950 aa20.23■□□□□ 0.83
HDAC4-211ENST00000494800 STXBP3O00186 592 aa20.22■□□□□ 0.83
HDAC4-211ENST00000494800 NOP56O00567 594 aaKnown RBP20.22■□□□□ 0.83
HDAC4-211ENST00000494800 PRPF3O43395 683 aaKnown RBP20.22■□□□□ 0.83
HDAC4-211ENST00000494800 SCG2P13521 617 aa20.22■□□□□ 0.83
HDAC4-211ENST00000494800 CHMP4BP1P59074 171 aa20.22■□□□□ 0.83
HDAC4-211ENST00000494800 NBPF20Q3BBV1 942 aa20.22■□□□□ 0.83
HDAC4-211ENST00000494800 LRIT3Q3SXY7 679 aa20.22■□□□□ 0.83
HDAC4-211ENST00000494800 MYSM1Q5VVJ2 828 aa20.22■□□□□ 0.83
HDAC4-211ENST00000494800 MFSD5Q6N075 450 aa20.22■□□□□ 0.83
HDAC4-211ENST00000494800 CPLX2Q6PUV4 134 aaKnown RBP20.22■□□□□ 0.83
HDAC4-211ENST00000494800 GIMAP8Q8ND71 665 aaPredicted RBP20.22■□□□□ 0.83
HDAC4-211ENST00000494800 ZNF274Q96GC6 653 aaPredicted RBP20.22■□□□□ 0.83
HDAC4-211ENST00000494800 ZFP91Q96JP5 570 aaPredicted RBP20.22■□□□□ 0.83
HDAC4-211ENST00000494800 HIPK3Q9H422 1215 aa20.22■□□□□ 0.83
HDAC4-211ENST00000494800 PCDH10Q9P2E7 1040 aa20.22■□□□□ 0.83
HDAC4-211ENST00000494800 NOD1Q9Y239 953 aa20.22■□□□□ 0.83
HDAC4-211ENST00000494800 KIAA1217Q5T5P2 1943 aa20.21■□□□□ 0.83
HDAC4-211ENST00000494800 LTBP2Q14767 1821 aa20.21■□□□□ 0.83
HDAC4-211ENST00000494800 SPATA31C2B4DYI2 1134 aa20.21■□□□□ 0.83
HDAC4-211ENST00000494800 CPLX1O14810 134 aa20.21■□□□□ 0.83
HDAC4-211ENST00000494800 B4GALT4O60513 344 aa20.21■□□□□ 0.83
HDAC4-211ENST00000494800 PPFIA4O75335 1185 aa20.21■□□□□ 0.83
HDAC4-211ENST00000494800 SLC34A2O95436 690 aa20.21■□□□□ 0.83
HDAC4-211ENST00000494800 ITGB8P26012 769 aa20.21■□□□□ 0.83
HDAC4-211ENST00000494800 CCT2P78371 535 aaKnown RBP20.21■□□□□ 0.83
HDAC4-211ENST00000494800 PPIGQ13427 754 aaKnown RBP eCLIP20.21■□□□□ 0.83
HDAC4-211ENST00000494800 TOB2Q14106 344 aaPredicted RBP20.21■□□□□ 0.83
HDAC4-211ENST00000494800 MCTP2Q6DN12 878 aa20.21■□□□□ 0.83
HDAC4-211ENST00000494800 TRIM22Q8IYM9 498 aa20.21■□□□□ 0.83
HDAC4-211ENST00000494800 GPRASP2Q96D09 838 aa20.21■□□□□ 0.83
HDAC4-211ENST00000494800 RNF26Q9BY78 433 aaPredicted RBP20.21■□□□□ 0.83
HDAC4-211ENST00000494800 PPP1R12CQ9BZL4 782 aa20.21■□□□□ 0.83
HDAC4-211ENST00000494800 TRPV6Q9H1D0 765 aa20.21■□□□□ 0.83
HDAC4-211ENST00000494800 RANBP2P49792 3224 aaKnown RBP20.21■□□□□ 0.83
HDAC4-211ENST00000494800 IFNAR1P17181 557 aa20.2■□□□□ 0.82
HDAC4-211ENST00000494800 AP3B2Q13367 1082 aa20.2■□□□□ 0.82
HDAC4-211ENST00000494800 ANKRD1Q15327 319 aa20.2■□□□□ 0.82
HDAC4-211ENST00000494800 SLC26A6Q9BXS9 759 aa20.2■□□□□ 0.82
HDAC4-211ENST00000494800 C6orf50Q9HD87 102 aa20.2■□□□□ 0.82
HDAC4-211ENST00000494800 MAFGO15525 162 aa20.19■□□□□ 0.82
HDAC4-211ENST00000494800 SORBS3O60504 671 aa20.19■□□□□ 0.82
HDAC4-211ENST00000494800 GNA11P29992 359 aa20.19■□□□□ 0.82
HDAC4-211ENST00000494800 SP2Q02086 613 aa20.19■□□□□ 0.82
HDAC4-211ENST00000494800 TYW1BQ6NUM6 668 aa20.19■□□□□ 0.82
HDAC4-211ENST00000494800 METTL7BQ6UX53 244 aa20.19■□□□□ 0.82
HDAC4-211ENST00000494800 C7orf31Q8N865 590 aa20.19■□□□□ 0.82
HDAC4-211ENST00000494800 CCDC148Q8NFR7 591 aa20.19■□□□□ 0.82
HDAC4-211ENST00000494800 PHKBQ93100 1093 aa20.19■□□□□ 0.82
HDAC4-211ENST00000494800 SENP7Q9BQF6 1050 aa20.19■□□□□ 0.82
HDAC4-211ENST00000494800 TRMT13Q9NUP7 481 aaKnown RBP20.19■□□□□ 0.82
HDAC4-211ENST00000494800 ESYT2A0FGR8 921 aa20.18■□□□□ 0.82
HDAC4-211ENST00000494800 MTMR1Q13613 665 aa20.18■□□□□ 0.82
HDAC4-211ENST00000494800 HSDL1Q3SXM5 330 aa20.18■□□□□ 0.82
HDAC4-211ENST00000494800 CYFIP1Q7L576 1253 aa20.18■□□□□ 0.82
HDAC4-211ENST00000494800 BICD2Q8TD16 824 aa20.18■□□□□ 0.82
HDAC4-211ENST00000494800 NCOA5Q9HCD5 579 aaKnown RBP20.18■□□□□ 0.82
HDAC4-211ENST00000494800 TRIOBPQ9H2D6 2365 aa20.18■□□□□ 0.82
HDAC4-211ENST00000494800 CDKL5O76039 1030 aa20.17■□□□□ 0.82
HDAC4-211ENST00000494800 F2P00734 622 aa20.17■□□□□ 0.82
HDAC4-211ENST00000494800 ZNF286BP0CG31 522 aa20.17■□□□□ 0.82
HDAC4-211ENST00000494800 HOXD8P13378 290 aaPredicted RBP20.17■□□□□ 0.82
HDAC4-211ENST00000494800 PSEN2P49810 448 aa20.17■□□□□ 0.82
HDAC4-211ENST00000494800 SSRP1Q08945 709 aaKnown RBP20.17■□□□□ 0.82
HDAC4-211ENST00000494800 MFSD10Q14728 455 aa20.17■□□□□ 0.82
HDAC4-211ENST00000494800 SHHQ15465 462 aa20.17■□□□□ 0.82
HDAC4-211ENST00000494800 NTRK3Q16288 839 aa20.17■□□□□ 0.82
HDAC4-211ENST00000494800 SESTD1Q86VW0 696 aa20.17■□□□□ 0.82
HDAC4-211ENST00000494800 CCDC155Q8N6L0 562 aa20.17■□□□□ 0.82
HDAC4-211ENST00000494800 NOC4LQ9BVI4 516 aaKnown RBP20.17■□□□□ 0.82
HDAC4-211ENST00000494800 ANO3Q9BYT9 981 aa20.17■□□□□ 0.82
HDAC4-211ENST00000494800 ZMYND12Q9H0C1 365 aa20.17■□□□□ 0.82
HDAC4-211ENST00000494800 CYP2C18P33260 490 aa20.16■□□□□ 0.82
HDAC4-211ENST00000494800 STK3Q13188 491 aa20.16■□□□□ 0.82
HDAC4-211ENST00000494800 PTGISQ16647 500 aa20.16■□□□□ 0.82
HDAC4-211ENST00000494800 KIAA0753Q2KHM9 967 aa20.16■□□□□ 0.82
HDAC4-211ENST00000494800 GPR153Q6NV75 609 aa20.16■□□□□ 0.82
HDAC4-211ENST00000494800 PSRC1Q6PGN9 363 aaPredicted RBP20.16■□□□□ 0.82
HDAC4-211ENST00000494800 REXO1Q8N1G1 1221 aaKnown RBP20.16■□□□□ 0.82
HDAC4-211ENST00000494800 KAT2BQ92831 832 aa20.16■□□□□ 0.82
HDAC4-211ENST00000494800 RNPC3Q96LT9 517 aaKnown RBP20.16■□□□□ 0.82
HDAC4-211ENST00000494800 ALG1Q9BT22 464 aa20.16■□□□□ 0.82
HDAC4-211ENST00000494800 JADE2Q9NQC1 790 aa20.16■□□□□ 0.82
HDAC4-211ENST00000494800 UBIAD1Q9Y5Z9 338 aa20.16■□□□□ 0.82
HDAC4-211ENST00000494800 CSF2RAP15509 400 aa20.15■□□□□ 0.82
HDAC4-211ENST00000494800 ITGB5P18084 799 aa20.15■□□□□ 0.82
HDAC4-211ENST00000494800 ZNF76P36508 570 aa20.15■□□□□ 0.82
HDAC4-211ENST00000494800 CLK2P49760 499 aaKnown RBP20.15■□□□□ 0.82
HDAC4-211ENST00000494800 SEMA3FQ13275 785 aa20.15■□□□□ 0.82
HDAC4-211ENST00000494800 BFSP2Q13515 415 aa20.15■□□□□ 0.82
HDAC4-211ENST00000494800 PKN1Q16512 942 aa20.15■□□□□ 0.82
HDAC4-211ENST00000494800 C9orf50Q5SZB4 431 aa20.15■□□□□ 0.82
HDAC4-211ENST00000494800 RETREG2Q8NC44 543 aa20.15■□□□□ 0.82
HDAC4-211ENST00000494800 SLKQ9H2G2 1235 aaPredicted RBP20.15■□□□□ 0.82
HDAC4-211ENST00000494800 SH3GLB2Q9NR46 395 aa20.15■□□□□ 0.82
HDAC4-211ENST00000494800 ZNF215Q9UL58 517 aaPredicted RBP20.15■□□□□ 0.82
HDAC4-211ENST00000494800 SOX1O00570 391 aaPredicted RBP20.14■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms