RNA–Protein interactions for RNA: ENST00000494571.1

ATG3-207, Transcript of autophagy related 3, humanhuman

TSL 2

Gene ATG3, Length 2,758 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG3-207ENST00000494571 SAMD15Q9P1V8 674 aa4.42□□□□□ -1.7
ATG3-207ENST00000494571 GGA2Q9UJY4 613 aa4.42□□□□□ -1.7
ATG3-207ENST00000494571 PCDHA7Q9UN72 937 aa4.42□□□□□ -1.7
ATG3-207ENST00000494571 SUPT6HQ7KZ85 1726 aaKnown RBP4.41□□□□□ -1.7
ATG3-207ENST00000494571 MAP3K5Q99683 1374 aa4.41□□□□□ -1.7
ATG3-207ENST00000494571 IQGAP1P46940 1657 aa4.41□□□□□ -1.7
ATG3-207ENST00000494571 ARHGAP23Q9P227 1491 aa4.41□□□□□ -1.7
ATG3-207ENST00000494571 DIP2AQ14689 1571 aa4.41□□□□□ -1.7
ATG3-207ENST00000494571 GCOM1H8Y6P7 765 aaPredicted RBP4.41□□□□□ -1.7
ATG3-207ENST00000494571 TEX33O43247 280 aa4.41□□□□□ -1.7
ATG3-207ENST00000494571 PDE5AO76074 875 aa4.41□□□□□ -1.7
ATG3-207ENST00000494571 POLR3DP05423 398 aaPredicted RBP4.41□□□□□ -1.7
ATG3-207ENST00000494571 MYZAPP0CAP1 466 aa4.41□□□□□ -1.7
ATG3-207ENST00000494571 GHRP10912 638 aa4.41□□□□□ -1.7
ATG3-207ENST00000494571 EPB41P11171 864 aaKnown RBP4.41□□□□□ -1.7
ATG3-207ENST00000494571 IDEP14735 1019 aa4.41□□□□□ -1.7
ATG3-207ENST00000494571 DDX5P17844 614 aaKnown RBP4.41□□□□□ -1.7
ATG3-207ENST00000494571 CASP14P31944 242 aa4.41□□□□□ -1.7
ATG3-207ENST00000494571 RXRGP48443 463 aa4.41□□□□□ -1.7
ATG3-207ENST00000494571 PEX5P50542 639 aa4.41□□□□□ -1.7
ATG3-207ENST00000494571 ERFP50548 548 aa4.41□□□□□ -1.7
ATG3-207ENST00000494571 VAV2P52735 878 aa4.41□□□□□ -1.7
ATG3-207ENST00000494571 COG7P83436 770 aa4.41□□□□□ -1.7
ATG3-207ENST00000494571 AMPD2Q01433 879 aa4.41□□□□□ -1.7
ATG3-207ENST00000494571 PTH1RQ03431 593 aa4.41□□□□□ -1.7
ATG3-207ENST00000494571 RALGDSQ12967 914 aa4.41□□□□□ -1.7
ATG3-207ENST00000494571 ITGB3BPQ13352 177 aaPredicted RBP4.41□□□□□ -1.7
ATG3-207ENST00000494571 HLTFQ14527 1009 aaKnown RBP eCLIP4.41□□□□□ -1.7
ATG3-207ENST00000494571 LAPTM4AQ15012 233 aa4.41□□□□□ -1.7
ATG3-207ENST00000494571 CYTH1Q15438 398 aa4.41□□□□□ -1.7
ATG3-207ENST00000494571 CLPPQ16740 277 aaPredicted RBP4.41□□□□□ -1.7
ATG3-207ENST00000494571 SGSM1Q2NKQ1 1148 aa4.41□□□□□ -1.7
ATG3-207ENST00000494571 CCDC122Q5T0U0 273 aa4.41□□□□□ -1.7
ATG3-207ENST00000494571 EMC10Q5UCC4 262 aa4.41□□□□□ -1.7
ATG3-207ENST00000494571 KLHL10Q6JEL2 608 aa4.41□□□□□ -1.7
ATG3-207ENST00000494571 TRPM8Q7Z2W7 1104 aa4.41□□□□□ -1.7
ATG3-207ENST00000494571 GPIHBP1Q8IV16 184 aa4.41□□□□□ -1.7
ATG3-207ENST00000494571 FMR1NBQ8N0W7 255 aaPredicted RBP4.41□□□□□ -1.7
ATG3-207ENST00000494571 RIBC1Q8N443 379 aaPredicted RBP4.41□□□□□ -1.7
ATG3-207ENST00000494571 KRI1Q8N9T8 703 aaKnown RBP4.41□□□□□ -1.7
ATG3-207ENST00000494571 ENGASEQ8NFI3 743 aa4.41□□□□□ -1.7
ATG3-207ENST00000494571 BHMTQ93088 406 aa4.41□□□□□ -1.7
ATG3-207ENST00000494571 HSPBAP1Q96EW2 488 aa4.41□□□□□ -1.7
ATG3-207ENST00000494571 NEK1Q96PY6 1258 aa4.41□□□□□ -1.7
ATG3-207ENST00000494571 XPO6Q96QU8 1125 aaKnown RBP4.41□□□□□ -1.7
ATG3-207ENST00000494571 NUDCD1Q96RS6 583 aa4.41□□□□□ -1.7
ATG3-207ENST00000494571 CTAGE1Q96RT6 745 aa4.41□□□□□ -1.7
ATG3-207ENST00000494571 LRRC2Q9BYS8 371 aa4.41□□□□□ -1.7
ATG3-207ENST00000494571 API5Q9BZZ5 524 aaKnown RBP4.41□□□□□ -1.7
ATG3-207ENST00000494571 CCSER1Q9C0I3 900 aa4.41□□□□□ -1.7
ATG3-207ENST00000494571 TAF1DQ9H5J8 278 aaPredicted RBP4.41□□□□□ -1.7
ATG3-207ENST00000494571 CTNNAL1Q9UBT7 734 aa4.41□□□□□ -1.7
ATG3-207ENST00000494571 NOVA2Q9UNW9 492 aaKnown RBP4.41□□□□□ -1.7
ATG3-207ENST00000494571 TTF2Q9UNY4 1162 aaKnown RBP4.41□□□□□ -1.7
ATG3-207ENST00000494571 LUC7L2Q9Y383 392 aaKnown RBP4.41□□□□□ -1.7
ATG3-207ENST00000494571 NFE2L3Q9Y4A8 694 aa4.41□□□□□ -1.7
ATG3-207ENST00000494571 ARIH1Q9Y4X5 557 aaPredicted RBP4.41□□□□□ -1.7
ATG3-207ENST00000494571 GCC2Q8IWJ2 1684 aa4.41□□□□□ -1.7
ATG3-207ENST00000494571 UNC13BO14795 1591 aa4.41□□□□□ -1.7
ATG3-207ENST00000494571 MAST1Q9Y2H9 1570 aa4.41□□□□□ -1.7
ATG3-207ENST00000494571 SART1O43290 800 aaKnown RBP4.41□□□□□ -1.7
ATG3-207ENST00000494571 LCA5LO95447 670 aa4.41□□□□□ -1.7
ATG3-207ENST00000494571 GNAI2P04899 355 aa4.41□□□□□ -1.7
ATG3-207ENST00000494571 MARCKSP29966 332 aaPredicted RBP4.41□□□□□ -1.7
ATG3-207ENST00000494571 CDC25AP30304 524 aa4.41□□□□□ -1.7
ATG3-207ENST00000494571 CARSP49589 748 aaKnown RBP4.41□□□□□ -1.7
ATG3-207ENST00000494571 RNASE9P60153 205 aaKnown RBP4.41□□□□□ -1.7
ATG3-207ENST00000494571 NCALDP61601 193 aa4.41□□□□□ -1.7
ATG3-207ENST00000494571 HPCAP84074 193 aa4.41□□□□□ -1.7
ATG3-207ENST00000494571 CYP4A11Q02928 519 aa4.41□□□□□ -1.7
ATG3-207ENST00000494571 SEPT2Q15019 361 aa4.41□□□□□ -1.7
ATG3-207ENST00000494571 INAQ16352 499 aa4.41□□□□□ -1.7
ATG3-207ENST00000494571 GLE1Q53GS7 698 aaKnown RBP4.41□□□□□ -1.7
ATG3-207ENST00000494571 SYDE2Q5VT97 1194 aa4.41□□□□□ -1.7
ATG3-207ENST00000494571 CCDC129Q6ZRS4 1044 aa4.41□□□□□ -1.7
ATG3-207ENST00000494571 ANO5Q75V66 913 aa4.41□□□□□ -1.7
ATG3-207ENST00000494571 TRAPPC11Q7Z392 1133 aa4.41□□□□□ -1.7
ATG3-207ENST00000494571 RIC3Q7Z5B4 369 aa4.41□□□□□ -1.7
ATG3-207ENST00000494571 SPATA24Q86W54 205 aa4.41□□□□□ -1.7
ATG3-207ENST00000494571 TREML1Q86YW5 311 aa4.41□□□□□ -1.7
ATG3-207ENST00000494571 USP6NLQ92738 828 aa4.41□□□□□ -1.7
ATG3-207ENST00000494571 CATSPER2Q96P56 530 aa4.41□□□□□ -1.7
ATG3-207ENST00000494571 TRPV5Q9NQA5 729 aa4.41□□□□□ -1.7
ATG3-207ENST00000494571 DKK3Q9UBP4 350 aa4.41□□□□□ -1.7
ATG3-207ENST00000494571 SEC63Q9UGP8 760 aaKnown RBP4.41□□□□□ -1.7
ATG3-207ENST00000494571 DSEQ9UL01 958 aa4.41□□□□□ -1.7
ATG3-207ENST00000494571 PNMA3Q9UL41 463 aa4.41□□□□□ -1.7
ATG3-207ENST00000494571 USP20Q9Y2K6 914 aa4.41□□□□□ -1.7
ATG3-207ENST00000494571 KIDINS220Q9ULH0 1771 aa4.41□□□□□ -1.7
ATG3-207ENST00000494571 MROH1Q8NDA8 1641 aa4.41□□□□□ -1.7
ATG3-207ENST00000494571 PRAG1Q86YV5 1406 aa4.4□□□□□ -1.7
ATG3-207ENST00000494571 LINC00854A0A1B0GVQ3 168 aa4.4□□□□□ -1.7
ATG3-207ENST00000494571 DCDC2CA8MYV0 355 aa4.4□□□□□ -1.7
ATG3-207ENST00000494571 HMGB1P1B2RPK0 211 aaPredicted RBP4.4□□□□□ -1.7
ATG3-207ENST00000494571 NVLO15381 856 aaKnown RBP4.4□□□□□ -1.7
ATG3-207ENST00000494571 ADCY3O60266 1144 aa4.4□□□□□ -1.7
ATG3-207ENST00000494571 COBLO75128 1261 aa4.4□□□□□ -1.7
ATG3-207ENST00000494571 VAMP4O75379 141 aa4.4□□□□□ -1.7
ATG3-207ENST00000494571 ASLP04424 464 aa4.4□□□□□ -1.7
ATG3-207ENST00000494571 CYP1A1P04798 512 aaPredicted RBP4.4□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms