RNA–Protein interactions for RNA: ENST00000494518.1

SKA1-205, Transcript of spindle and kinetochore associated complex subunit 1, humanhuman

TSL 2

Gene SKA1, Length 746 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA1-205ENST00000494518 HSD17B4P51659 736 aa14.7□□□□□ -0.06
SKA1-205ENST00000494518 KCNQ1P51787 676 aa14.7□□□□□ -0.06
SKA1-205ENST00000494518 WDR5P61964 334 aaKnown RBP14.7□□□□□ -0.06
SKA1-205ENST00000494518 AAMPQ13685 434 aa14.7□□□□□ -0.06
SKA1-205ENST00000494518 MFSD10Q14728 455 aa14.7□□□□□ -0.06
SKA1-205ENST00000494518 SEC23AQ15436 765 aa14.7□□□□□ -0.06
SKA1-205ENST00000494518 KIAA0753Q2KHM9 967 aa14.7□□□□□ -0.06
SKA1-205ENST00000494518 SLC35G1Q2M3R5 365 aa14.7□□□□□ -0.06
SKA1-205ENST00000494518 FAM117BQ6P1L5 589 aa14.7□□□□□ -0.06
SKA1-205ENST00000494518 DHX37Q8IY37 1157 aaKnown RBP14.7□□□□□ -0.06
SKA1-205ENST00000494518 CAGE1Q8TC20 777 aa14.7□□□□□ -0.06
SKA1-205ENST00000494518 AFAP1L1Q8TED9 768 aa14.7□□□□□ -0.06
SKA1-205ENST00000494518 PIBF1Q8WXW3 757 aa14.7□□□□□ -0.06
SKA1-205ENST00000494518 GPKOWQ92917 476 aaPredicted RBP eCLIP14.7□□□□□ -0.068e-6■■■□□ 18.6
SKA1-205ENST00000494518 WNT8BQ93098 351 aa14.7□□□□□ -0.06
SKA1-205ENST00000494518 TSPYL2Q9H2G4 693 aaPredicted RBP14.7□□□□□ -0.06
SKA1-205ENST00000494518 SENP2Q9HC62 589 aa14.7□□□□□ -0.06
SKA1-205ENST00000494518 GTF2IRD1Q9UHL9 959 aa14.7□□□□□ -0.06
SKA1-205ENST00000494518 RAPGEFL1Q9UHV5 662 aa14.7□□□□□ -0.06
SKA1-205ENST00000494518 SIP14410 1827 aa14.7□□□□□ -0.06
SKA1-205ENST00000494518 KIF28PB7ZC32 967 aa14.69□□□□□ -0.06
SKA1-205ENST00000494518 NBNO60934 754 aa14.69□□□□□ -0.06
SKA1-205ENST00000494518 RGS20O76081 388 aa14.69□□□□□ -0.06
SKA1-205ENST00000494518 CKBP12277 381 aa14.69□□□□□ -0.06
SKA1-205ENST00000494518 GSPT1P15170 499 aaKnown RBP14.69□□□□□ -0.06
SKA1-205ENST00000494518 NT5C2P49902 561 aa14.69□□□□□ -0.06
SKA1-205ENST00000494518 SESTD1Q86VW0 696 aa14.69□□□□□ -0.06
SKA1-205ENST00000494518 FCHSD1Q86WN1 690 aa14.69□□□□□ -0.06
SKA1-205ENST00000494518 PHOSPHO2Q8TCD6 241 aa14.69□□□□□ -0.06
SKA1-205ENST00000494518 PIGSQ96S52 555 aa14.69□□□□□ -0.06
SKA1-205ENST00000494518 PDCD2LQ9BRP1 358 aa14.69□□□□□ -0.06
SKA1-205ENST00000494518 MTUS1Q9ULD2 1270 aa14.69□□□□□ -0.06
SKA1-205ENST00000494518 PCDHA1Q9Y5I3 950 aa14.69□□□□□ -0.06
SKA1-205ENST00000494518 TAF6LQ9Y6J9 622 aa14.69□□□□□ -0.06
SKA1-205ENST00000494518 ZBTB5O15062 677 aa14.68□□□□□ -0.06
SKA1-205ENST00000494518 BAIAP3O94812 1187 aa14.68□□□□□ -0.06
SKA1-205ENST00000494518 GGPS1O95749 300 aa14.68□□□□□ -0.06
SKA1-205ENST00000494518 F2P00734 622 aa14.68□□□□□ -0.06
SKA1-205ENST00000494518 PTH1RQ03431 593 aa14.68□□□□□ -0.06
SKA1-205ENST00000494518 GRB10Q13322 594 aa14.68□□□□□ -0.06
SKA1-205ENST00000494518 LAMC2Q13753 1193 aa14.68□□□□□ -0.06
SKA1-205ENST00000494518 HIC1Q14526 733 aa14.68□□□□□ -0.06
SKA1-205ENST00000494518 PGM5Q15124 567 aa14.68□□□□□ -0.06
SKA1-205ENST00000494518 PPTC7Q8NI37 304 aa14.68□□□□□ -0.06
SKA1-205ENST00000494518 GDPD5Q8WTR4 605 aa14.68□□□□□ -0.06
SKA1-205ENST00000494518 EMID1Q96A84 441 aaPredicted RBP14.68□□□□□ -0.06
SKA1-205ENST00000494518 MTMR8Q96EF0 704 aa14.68□□□□□ -0.06
SKA1-205ENST00000494518 SPATA33Q96N06 139 aa14.68□□□□□ -0.06
SKA1-205ENST00000494518 ZBED2Q9BTP6 218 aa14.68□□□□□ -0.06
SKA1-205ENST00000494518 PALM3A6NDB9 673 aaPredicted RBP14.67□□□□□ -0.06
SKA1-205ENST00000494518 IFIT3O14879 490 aaKnown RBP14.67□□□□□ -0.06
SKA1-205ENST00000494518 COL9A1P20849 921 aa14.67□□□□□ -0.06
SKA1-205ENST00000494518 UBA1P22314 1058 aaKnown RBP14.67□□□□□ -0.06
SKA1-205ENST00000494518 SP2Q02086 613 aa14.67□□□□□ -0.06
SKA1-205ENST00000494518 TRDNQ13061 729 aa14.67□□□□□ -0.06
SKA1-205ENST00000494518 MBTPS1Q14703 1052 aa14.67□□□□□ -0.06
SKA1-205ENST00000494518 GRM4Q14833 912 aa14.67□□□□□ -0.06
SKA1-205ENST00000494518 HSDL1Q3SXM5 330 aa14.67□□□□□ -0.06
SKA1-205ENST00000494518 ZNF618Q5T7W0 954 aa14.67□□□□□ -0.06
SKA1-205ENST00000494518 TTC22Q5TAA0 569 aa14.67□□□□□ -0.06
SKA1-205ENST00000494518 MYSM1Q5VVJ2 828 aa14.67□□□□□ -0.06
SKA1-205ENST00000494518 CNKSR3Q6P9H4 555 aa14.67□□□□□ -0.06
SKA1-205ENST00000494518 KATNAL1Q9BW62 490 aa14.67□□□□□ -0.06
SKA1-205ENST00000494518 MAF1Q9H063 256 aa14.67□□□□□ -0.06
SKA1-205ENST00000494518 BCAS3Q9H6U6 928 aa14.67□□□□□ -0.06
SKA1-205ENST00000494518 MYO7AQ13402 2215 aa14.67□□□□□ -0.06
SKA1-205ENST00000494518 NLRC5Q86WI3 1866 aa14.66□□□□□ -0.06
SKA1-205ENST00000494518 HAS3O00219 553 aa14.66□□□□□ -0.06
SKA1-205ENST00000494518 CYP21A2P08686 494 aa14.66□□□□□ -0.06
SKA1-205ENST00000494518 CCND2P30279 289 aa14.66□□□□□ -0.06
SKA1-205ENST00000494518 PTK7Q13308 1070 aa14.66□□□□□ -0.06
SKA1-205ENST00000494518 TRIM71Q2Q1W2 868 aaKnown RBP14.66□□□□□ -0.06
SKA1-205ENST00000494518 CELF3Q5SZQ8 465 aaKnown RBP14.66□□□□□ -0.06
SKA1-205ENST00000494518 STOX1Q6ZVD7 989 aa14.66□□□□□ -0.06
SKA1-205ENST00000494518 VSIG10LQ86VR7 867 aa14.66□□□□□ -0.06
SKA1-205ENST00000494518 SPDYE1Q8NFV5 336 aaPredicted RBP14.66□□□□□ -0.06
SKA1-205ENST00000494518 GCOM1H8Y6P7 765 aaPredicted RBP14.65□□□□□ -0.06
SKA1-205ENST00000494518 CYTH3O43739 400 aa14.65□□□□□ -0.06
SKA1-205ENST00000494518 LPXNO60711 386 aa14.65□□□□□ -0.06
SKA1-205ENST00000494518 CXCL10P02778 98 aa14.65□□□□□ -0.06
SKA1-205ENST00000494518 POLR2MP0CAP2 368 aa14.65□□□□□ -0.06
SKA1-205ENST00000494518 BMP1P13497 986 aa14.65□□□□□ -0.06
SKA1-205ENST00000494518 IRX6P78412 446 aaPredicted RBP14.65□□□□□ -0.06
SKA1-205ENST00000494518 GHRHRQ02643 423 aa14.65□□□□□ -0.06
SKA1-205ENST00000494518 RBL2Q08999 1139 aa14.65□□□□□ -0.06
SKA1-205ENST00000494518 WTAPQ15007 396 aa14.65□□□□□ -0.06
SKA1-205ENST00000494518 TRAF7Q6Q0C0 670 aa14.65□□□□□ -0.06
SKA1-205ENST00000494518 MLXIPQ9HAP2 919 aa14.65□□□□□ -0.06
SKA1-205ENST00000494518 ERICH2A1L162 156 aa14.64□□□□□ -0.07
SKA1-205ENST00000494518 HOXD8P13378 290 aaPredicted RBP14.64□□□□□ -0.07
SKA1-205ENST00000494518 POU3F3P20264 500 aaPredicted RBP14.64□□□□□ -0.07
SKA1-205ENST00000494518 THPOP40225 353 aa14.64□□□□□ -0.07
SKA1-205ENST00000494518 LIN28BQ6ZN17 250 aaKnown RBP eCLIP14.64□□□□□ -0.07
SKA1-205ENST00000494518 RALYLQ86SE5 291 aaKnown RBP14.64□□□□□ -0.07
SKA1-205ENST00000494518 MYL10Q9BUA6 226 aa14.64□□□□□ -0.07
SKA1-205ENST00000494518 RIOX1Q9H6W3 641 aa14.64□□□□□ -0.07
SKA1-205ENST00000494518 TELO2Q9Y4R8 837 aa14.64□□□□□ -0.07
SKA1-205ENST00000494518 E7EWF7 191 aa14.63□□□□□ -0.07
SKA1-205ENST00000494518 PPFIA4O75335 1185 aa14.63□□□□□ -0.07
SKA1-205ENST00000494518 LGR5O75473 907 aa14.63□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms