RNA–Protein interactions for RNA: ENST00000494183.5

COL25A1-204, Transcript of collagen type XXV alpha 1 chain, humanhuman

TSL 5

Gene COL25A1, Length 4,630 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL25A1-204ENST00000494183 HINFPQ9BQA5 517 aa12.76□□□□□ -0.37
COL25A1-204ENST00000494183 RAVER2Q9HCJ3 691 aaKnown RBP12.76□□□□□ -0.37
COL25A1-204ENST00000494183 OGFRQ9NZT2 677 aa12.76□□□□□ -0.37
COL25A1-204ENST00000494183 PCDHA6Q9UN73 950 aa12.76□□□□□ -0.37
COL25A1-204ENST00000494183 PCDHA8Q9Y5H6 950 aa12.76□□□□□ -0.37
COL25A1-204ENST00000494183 NRKQ7Z2Y5 1582 aa12.76□□□□□ -0.37
COL25A1-204ENST00000494183 A0A0G2JLW4 131 aa12.76□□□□□ -0.37
COL25A1-204ENST00000494183 AFPP02771 609 aaKnown RBP12.76□□□□□ -0.37
COL25A1-204ENST00000494183 KRT15P19012 456 aa12.76□□□□□ -0.37
COL25A1-204ENST00000494183 MARK3P27448 753 aa12.76□□□□□ -0.37
COL25A1-204ENST00000494183 ALDH3A1P30838 453 aa12.76□□□□□ -0.37
COL25A1-204ENST00000494183 HADHQ16836 314 aaKnown RBP12.76□□□□□ -0.37
COL25A1-204ENST00000494183 KRT71Q3SY84 523 aa12.76□□□□□ -0.37
COL25A1-204ENST00000494183 NAA35Q5VZE5 725 aa12.76□□□□□ -0.37
COL25A1-204ENST00000494183 TBC1D16Q8TBP0 767 aa12.76□□□□□ -0.37
COL25A1-204ENST00000494183 DCAF4Q8WV16 495 aa12.76□□□□□ -0.37
COL25A1-204ENST00000494183 CEP63Q96MT8 703 aa12.76□□□□□ -0.37
COL25A1-204ENST00000494183 FAM184BQ9ULE4 1060 aa12.76□□□□□ -0.37
COL25A1-204ENST00000494183 PSDA5PKW4 1024 aaPredicted RBP12.76□□□□□ -0.37
COL25A1-204ENST00000494183 GOLGA6CA6NDK9 693 aa12.76□□□□□ -0.37
COL25A1-204ENST00000494183 GOLGA6DP0CG33 693 aa12.76□□□□□ -0.37
COL25A1-204ENST00000494183 SRGAP2CP0DJJ0 459 aa12.76□□□□□ -0.37
COL25A1-204ENST00000494183 MNAT1P51948 309 aa12.76□□□□□ -0.37
COL25A1-204ENST00000494183 MFAP3P55082 362 aa12.76□□□□□ -0.37
COL25A1-204ENST00000494183 BPIFB4P59827 614 aa12.76□□□□□ -0.37
COL25A1-204ENST00000494183 ITIH3Q06033 890 aa12.76□□□□□ -0.37
COL25A1-204ENST00000494183 GOLGA6AQ9NYA3 693 aa12.76□□□□□ -0.37
COL25A1-204ENST00000494183 RNF181Q9P0P0 153 aa12.76□□□□□ -0.37
COL25A1-204ENST00000494183 PARP2Q9UGN5 583 aa12.76□□□□□ -0.37
COL25A1-204ENST00000494183 ZNF215Q9UL58 517 aaPredicted RBP12.76□□□□□ -0.37
COL25A1-204ENST00000494183 ATP1A3P13637 1013 aa12.76□□□□□ -0.37
COL25A1-204ENST00000494183 CASP1P29466 404 aa12.76□□□□□ -0.37
COL25A1-204ENST00000494183 ITPK1Q13572 414 aa12.76□□□□□ -0.37
COL25A1-204ENST00000494183 KMT5BQ4FZB7 885 aa12.76□□□□□ -0.37
COL25A1-204ENST00000494183 RC3H1Q5TC82 1133 aaKnown RBP12.76□□□□□ -0.37
COL25A1-204ENST00000494183 RCSD1Q6JBY9 416 aa12.76□□□□□ -0.37
COL25A1-204ENST00000494183 SLC17A8Q8NDX2 589 aa12.76□□□□□ -0.37
COL25A1-204ENST00000494183 CACTINQ8WUQ7 758 aaKnown RBP12.76□□□□□ -0.37
COL25A1-204ENST00000494183 NSUN4Q96CB9 384 aaKnown RBP12.76□□□□□ -0.37
COL25A1-204ENST00000494183 CCDC94Q9BW85 323 aaPredicted RBP12.76□□□□□ -0.37
COL25A1-204ENST00000494183 RABEP2Q9H5N1 569 aa12.76□□□□□ -0.37
COL25A1-204ENST00000494183 TMEM206Q9H813 350 aa12.76□□□□□ -0.37
COL25A1-204ENST00000494183 POLD4Q9HCU8 107 aa12.76□□□□□ -0.37
COL25A1-204ENST00000494183 SLTMQ9NWH9 1034 aaKnown RBP eCLIP12.76□□□□□ -0.37
COL25A1-204ENST00000494183 NXF1Q9UBU9 619 aaKnown RBP12.76□□□□□ -0.37
COL25A1-204ENST00000494183 ABCA6Q8N139 1617 aa12.76□□□□□ -0.37
COL25A1-204ENST00000494183 K7ERI5 159 aa12.75□□□□□ -0.37
COL25A1-204ENST00000494183 MESDQ14696 234 aa12.75□□□□□ -0.37
COL25A1-204ENST00000494183 SETDB1Q15047 1291 aa12.75□□□□□ -0.37
COL25A1-204ENST00000494183 RSAD2Q8WXG1 361 aa12.75□□□□□ -0.37
COL25A1-204ENST00000494183 FAM149B1Q96BN6 582 aa12.75□□□□□ -0.37
COL25A1-204ENST00000494183 RAB17Q9H0T7 212 aa12.75□□□□□ -0.37
COL25A1-204ENST00000494183 SH3GLB2Q9NR46 395 aa12.75□□□□□ -0.37
COL25A1-204ENST00000494183 RAB20Q9NX57 234 aa12.75□□□□□ -0.37
COL25A1-204ENST00000494183 PYCARDQ9ULZ3 195 aa12.75□□□□□ -0.37
COL25A1-204ENST00000494183 PCDHB4Q9Y5E5 795 aa12.75□□□□□ -0.37
COL25A1-204ENST00000494183 PLEKHG2Q9H7P9 1386 aa12.75□□□□□ -0.37
COL25A1-204ENST00000494183 SYNJ2BP-COX16A0A087WUM0 186 aa12.75□□□□□ -0.37
COL25A1-204ENST00000494183 NDUFAB1O14561 156 aa12.75□□□□□ -0.37
COL25A1-204ENST00000494183 HGSO14964 777 aaPredicted RBP12.75□□□□□ -0.37
COL25A1-204ENST00000494183 TLR3O15455 904 aaKnown RBP12.75□□□□□ -0.37
COL25A1-204ENST00000494183 PSAPP07602 524 aa12.75□□□□□ -0.37
COL25A1-204ENST00000494183 AKR1B1P15121 316 aa12.75□□□□□ -0.37
COL25A1-204ENST00000494183 GUCY2FP51841 1108 aa12.75□□□□□ -0.37
COL25A1-204ENST00000494183 RBL2Q08999 1139 aa12.75□□□□□ -0.37
COL25A1-204ENST00000494183 AP3B2Q13367 1082 aa12.75□□□□□ -0.37
COL25A1-204ENST00000494183 KRT81Q14533 505 aa12.75□□□□□ -0.37
COL25A1-204ENST00000494183 RSPH3Q86UC2 560 aa12.75□□□□□ -0.37
COL25A1-204ENST00000494183 CTAGE3PQ8IX95 158 aa12.75□□□□□ -0.37
COL25A1-204ENST00000494183 ABI1Q8IZP0 508 aa12.75□□□□□ -0.37
COL25A1-204ENST00000494183 NEDD1Q8NHV4 660 aa12.75□□□□□ -0.37
COL25A1-204ENST00000494183 MTA3Q9BTC8 594 aa12.75□□□□□ -0.37
COL25A1-204ENST00000494183 PLA2G12BQ9BX93 195 aa12.75□□□□□ -0.37
COL25A1-204ENST00000494183 HOXC10Q9NYD6 342 aa12.75□□□□□ -0.37
COL25A1-204ENST00000494183 COX16Q9P0S2 106 aa12.75□□□□□ -0.37
COL25A1-204ENST00000494183 GDAQ9Y2T3 454 aa12.75□□□□□ -0.37
COL25A1-204ENST00000494183 LPXNO60711 386 aa12.75□□□□□ -0.37
COL25A1-204ENST00000494183 TBC1D8O95759 1140 aa12.75□□□□□ -0.37
COL25A1-204ENST00000494183 PSMC4P43686 418 aa12.75□□□□□ -0.37
COL25A1-204ENST00000494183 AFAP1L1Q8TED9 768 aa12.75□□□□□ -0.37
COL25A1-204ENST00000494183 ADAMTS13Q76LX8 1427 aa12.74□□□□□ -0.37
COL25A1-204ENST00000494183 XPOTO43592 962 aaKnown RBP12.74□□□□□ -0.37
COL25A1-204ENST00000494183 STAM2O75886 525 aa12.74□□□□□ -0.37
COL25A1-204ENST00000494183 DDIT3P35638 169 aa12.74□□□□□ -0.37
COL25A1-204ENST00000494183 LLGL1Q15334 1064 aa12.74□□□□□ -0.37
COL25A1-204ENST00000494183 WHAMMP3Q1A5X7 153 aa12.74□□□□□ -0.37
COL25A1-204ENST00000494183 SNRNP48Q6IEG0 339 aaKnown RBP12.74□□□□□ -0.37
COL25A1-204ENST00000494183 LINC00116Q8NCU8 138 aa12.74□□□□□ -0.37
COL25A1-204ENST00000494183 NLRP4Q96MN2 994 aa12.74□□□□□ -0.37
COL25A1-204ENST00000494183 VPS37BQ9H9H4 285 aa12.74□□□□□ -0.37
COL25A1-204ENST00000494183 BZW2Q9Y6E2 419 aaKnown RBP12.74□□□□□ -0.37
COL25A1-204ENST00000494183 E9PCH4 1651 aa12.74□□□□□ -0.37
COL25A1-204ENST00000494183 ENC1O14682 589 aa12.74□□□□□ -0.37
COL25A1-204ENST00000494183 MXI1P50539 228 aa12.74□□□□□ -0.37
COL25A1-204ENST00000494183 ARHGEF6Q15052 776 aa12.74□□□□□ -0.37
COL25A1-204ENST00000494183 QRICH1Q2TAL8 776 aa12.74□□□□□ -0.37
COL25A1-204ENST00000494183 TRIM50Q86XT4 487 aa12.74□□□□□ -0.37
COL25A1-204ENST00000494183 EXOC8Q8IYI6 725 aa12.74□□□□□ -0.37
COL25A1-204ENST00000494183 PPM1EQ8WY54 764 aa12.74□□□□□ -0.37
COL25A1-204ENST00000494183 MIS12Q9H081 205 aa12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms