RNA–Protein interactions for RNA: ENST00000493945.5

ACTB-213, Transcript of actin beta, humanhuman

TSL 5

Gene ACTB, Length 1,236 nt, Biotype retained intron, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-213ENST00000493945 RTEL1Q9NZ71 1219 aa16.88■□□□□ 0.29
ACTB-213ENST00000493945 FAM184BQ9ULE4 1060 aa16.88■□□□□ 0.29
ACTB-213ENST00000493945 PTCH2Q9Y6C5 1203 aa16.88■□□□□ 0.29
ACTB-213ENST00000493945 STK24Q9Y6E0 443 aa16.88■□□□□ 0.29
ACTB-213ENST00000493945 ASTN1O14525 1302 aa16.88■□□□□ 0.29
ACTB-213ENST00000493945 FAM205CA6NFA0 338 aa16.87■□□□□ 0.29
ACTB-213ENST00000493945 GOLGA6L22H0YM25 854 aa16.87■□□□□ 0.29
ACTB-213ENST00000493945 GAS7O60861 476 aa16.87■□□□□ 0.29
ACTB-213ENST00000493945 TDP2O95551 362 aa16.87■□□□□ 0.29
ACTB-213ENST00000493945 YEATS4O95619 227 aa16.87■□□□□ 0.29
ACTB-213ENST00000493945 PRKAR2AP13861 404 aaKnown RBP16.87■□□□□ 0.29
ACTB-213ENST00000493945 CYP2C19P33261 490 aa16.87■□□□□ 0.29
ACTB-213ENST00000493945 PRPHP41219 470 aa16.87■□□□□ 0.29
ACTB-213ENST00000493945 CCL14Q16627 93 aa16.87■□□□□ 0.29
ACTB-213ENST00000493945 EARS2Q5JPH6 523 aaKnown RBP16.87■□□□□ 0.29
ACTB-213ENST00000493945 ANO1Q5XXA6 986 aa16.87■□□□□ 0.29
ACTB-213ENST00000493945 ARL6IP4Q66PJ3 421 aaKnown RBP16.87■□□□□ 0.29
ACTB-213ENST00000493945 KCNG4Q8TDN1 519 aa16.87■□□□□ 0.29
ACTB-213ENST00000493945 MBOAT7Q96N66 472 aa16.87■□□□□ 0.29
ACTB-213ENST00000493945 TEKT3Q9BXF9 490 aa16.87■□□□□ 0.29
ACTB-213ENST00000493945 EIF4ENIF1Q9NRA8 985 aaKnown RBP16.87■□□□□ 0.29
ACTB-213ENST00000493945 KCNH7Q9NS40 1196 aa16.87■□□□□ 0.29
ACTB-213ENST00000493945 FAM86B1E9PN63 330 aa16.86■□□□□ 0.29
ACTB-213ENST00000493945 IPO5O00410 1097 aaKnown RBP16.86■□□□□ 0.29
ACTB-213ENST00000493945 SNAI1O95863 264 aaPredicted RBP16.86■□□□□ 0.29
ACTB-213ENST00000493945 INHAP05111 366 aa16.86■□□□□ 0.29
ACTB-213ENST00000493945 FAM86B2P0C5J1 330 aa16.86■□□□□ 0.29
ACTB-213ENST00000493945 TXNP10599 105 aaKnown RBP16.86■□□□□ 0.29
ACTB-213ENST00000493945 ELNP15502 786 aa16.86■□□□□ 0.29
ACTB-213ENST00000493945 ITGB5P18084 799 aa16.86■□□□□ 0.29
ACTB-213ENST00000493945 CNGA1P29973 690 aa16.86■□□□□ 0.29
ACTB-213ENST00000493945 ZNF174Q15697 407 aa16.86■□□□□ 0.29
ACTB-213ENST00000493945 LRCH2Q5VUJ6 765 aa16.86■□□□□ 0.29
ACTB-213ENST00000493945 FERMT2Q96AC1 680 aa16.86■□□□□ 0.29
ACTB-213ENST00000493945 RIT2Q99578 217 aa16.86■□□□□ 0.29
ACTB-213ENST00000493945 HMX1Q9NP08 348 aaPredicted RBP16.86■□□□□ 0.29
ACTB-213ENST00000493945 MORC2Q9Y6X9 1032 aaPredicted RBP16.86■□□□□ 0.29
ACTB-213ENST00000493945 NFASCO94856 1347 aa16.86■□□□□ 0.29
ACTB-213ENST00000493945 IGLV3-22A0A075B6J6 115 aa16.85■□□□□ 0.29
ACTB-213ENST00000493945 RBM47A0AV96 593 aaKnown RBP16.85■□□□□ 0.29
ACTB-213ENST00000493945 SPATA31C2B4DYI2 1134 aa16.85■□□□□ 0.29
ACTB-213ENST00000493945 NOP56O00567 594 aaKnown RBP16.85■□□□□ 0.29
ACTB-213ENST00000493945 ADAMTS3O15072 1205 aa16.85■□□□□ 0.29
ACTB-213ENST00000493945 SEPT4O43236 478 aa16.85■□□□□ 0.29
ACTB-213ENST00000493945 GH1P01241 217 aa16.85■□□□□ 0.29
ACTB-213ENST00000493945 RARBP10826 455 aa16.85■□□□□ 0.29
ACTB-213ENST00000493945 CYBAP13498 195 aa16.85■□□□□ 0.29
ACTB-213ENST00000493945 KRT76Q01546 638 aa16.85■□□□□ 0.29
ACTB-213ENST00000493945 TNFAIP2Q03169 654 aa16.85■□□□□ 0.29
ACTB-213ENST00000493945 DTHD1Q6ZMT9 781 aa16.85■□□□□ 0.29
ACTB-213ENST00000493945 MLXIPQ9HAP2 919 aa16.85■□□□□ 0.29
ACTB-213ENST00000493945 FLRT1Q9NZU1 646 aa16.85■□□□□ 0.29
ACTB-213ENST00000493945 PCDHB6Q9Y5E3 794 aa16.85■□□□□ 0.29
ACTB-213ENST00000493945 CAPN2P17655 700 aa16.84■□□□□ 0.29
ACTB-213ENST00000493945 SFNP31947 248 aa16.84■□□□□ 0.29
ACTB-213ENST00000493945 TXLNAP40222 546 aa16.84■□□□□ 0.29
ACTB-213ENST00000493945 NASPP49321 788 aaPredicted RBP16.84■□□□□ 0.29
ACTB-213ENST00000493945 TOB1P50616 345 aaPredicted RBP16.84■□□□□ 0.29
ACTB-213ENST00000493945 ATP2C1P98194 919 aaPredicted RBP16.84■□□□□ 0.29
ACTB-213ENST00000493945 DNM1Q05193 864 aaKnown RBP16.84■□□□□ 0.29
ACTB-213ENST00000493945 PTGDRQ13258 359 aa16.84■□□□□ 0.29
ACTB-213ENST00000493945 LAMC2Q13753 1193 aa16.84■□□□□ 0.29
ACTB-213ENST00000493945 CCDC144BQ3MJ40 725 aa16.84■□□□□ 0.29
ACTB-213ENST00000493945 FOXD4L6Q3SYB3 417 aaPredicted RBP16.84■□□□□ 0.29
ACTB-213ENST00000493945 DUSP28Q4G0W2 176 aa16.84■□□□□ 0.29
ACTB-213ENST00000493945 FOXD4L3Q6VB84 417 aaPredicted RBP16.84■□□□□ 0.29
ACTB-213ENST00000493945 POTEDQ86YR6 584 aa16.84■□□□□ 0.29
ACTB-213ENST00000493945 DHX37Q8IY37 1157 aaKnown RBP16.84■□□□□ 0.29
ACTB-213ENST00000493945 ERMNQ8TAM6 284 aa16.84■□□□□ 0.29
ACTB-213ENST00000493945 SPATA32Q96LK8 384 aa16.84■□□□□ 0.29
ACTB-213ENST00000493945 AP5M1Q9H0R1 490 aa16.84■□□□□ 0.29
ACTB-213ENST00000493945 AGO4Q9HCK5 861 aaKnown RBP16.84■□□□□ 0.29
ACTB-213ENST00000493945 JPH1Q9HDC5 661 aaPredicted RBP16.84■□□□□ 0.29
ACTB-213ENST00000493945 PCDHA12Q9UN75 941 aa16.84■□□□□ 0.29
ACTB-213ENST00000493945 ZDHHC9Q9Y397 364 aa16.84■□□□□ 0.29
ACTB-213ENST00000493945 Q9Y3F1 56 aa16.84■□□□□ 0.29
ACTB-213ENST00000493945 PCNTO95613 3336 aa16.83■□□□□ 0.29
ACTB-213ENST00000493945 GOLGA6L4A6NEF3 574 aa16.83■□□□□ 0.28
ACTB-213ENST00000493945 SPTLC2O15270 562 aa16.83■□□□□ 0.28
ACTB-213ENST00000493945 MSH4O15457 936 aa16.83■□□□□ 0.28
ACTB-213ENST00000493945 SLC37A4O43826 429 aa16.83■□□□□ 0.28
ACTB-213ENST00000493945 ZEB2O60315 1214 aa16.83■□□□□ 0.28
ACTB-213ENST00000493945 JAK3P52333 1124 aa16.83■□□□□ 0.28
ACTB-213ENST00000493945 CEBPZQ03701 1054 aaKnown RBP16.83■□□□□ 0.28
ACTB-213ENST00000493945 CACNB2Q08289 660 aaPredicted RBP16.83■□□□□ 0.28
ACTB-213ENST00000493945 MAP3K21Q5TCX8 1036 aa16.83■□□□□ 0.28
ACTB-213ENST00000493945 HAUS3Q68CZ6 603 aa16.83■□□□□ 0.28
ACTB-213ENST00000493945 METTL7BQ6UX53 244 aa16.83■□□□□ 0.28
ACTB-213ENST00000493945 SMAP1Q8IYB5 467 aaPredicted RBP16.83■□□□□ 0.28
ACTB-213ENST00000493945 RDM1Q8NG50 284 aa16.83■□□□□ 0.28
ACTB-213ENST00000493945 SLC5A5Q92911 643 aa16.83■□□□□ 0.28
ACTB-213ENST00000493945 USP28Q96RU2 1077 aa16.83■□□□□ 0.28
ACTB-213ENST00000493945 KCNMB3Q9NPA1 279 aa16.83■□□□□ 0.28
ACTB-213ENST00000493945 TCHHQ07283 1943 aa16.82■□□□□ 0.28
ACTB-213ENST00000493945 DKC1O60832 514 aaKnown RBP eCLIP16.82■□□□□ 0.28
ACTB-213ENST00000493945 PPP6R2O75170 966 aa16.82■□□□□ 0.28
ACTB-213ENST00000493945 DUSP11O75319 330 aaKnown RBP16.82■□□□□ 0.28
ACTB-213ENST00000493945 GGPS1O95749 300 aa16.82■□□□□ 0.28
ACTB-213ENST00000493945 IGHA2P01877 340 aa16.82■□□□□ 0.28
ACTB-213ENST00000493945 ZNF865P0CJ78 1059 aaPredicted RBP16.82■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms