RNA–Protein interactions for RNA: ENST00000493695.1

SMC4-223, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 457 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-223ENST00000493695 ARHGEF18Q6ZSZ5 1173 aa7.09□□□□□ -1.27
SMC4-223ENST00000493695 RIOX2Q8IUF8 465 aa7.09□□□□□ -1.27
SMC4-223ENST00000493695 ARRDC4Q8NCT1 418 aa7.09□□□□□ -1.27
SMC4-223ENST00000493695 KRTAP3-1Q9BYR8 98 aa7.09□□□□□ -1.27
SMC4-223ENST00000493695 FTSJ1Q9UET6 329 aa7.09□□□□□ -1.27
SMC4-223ENST00000493695 TMEFF2Q9UIK5 374 aaPredicted RBP7.09□□□□□ -1.27
SMC4-223ENST00000493695 C1QTNF3-AMACRE9PGA6 284 aa7.08□□□□□ -1.28
SMC4-223ENST00000493695 TBX1O43435 398 aa7.08□□□□□ -1.28
SMC4-223ENST00000493695 SUV39H1O43463 412 aa7.08□□□□□ -1.28
SMC4-223ENST00000493695 B4GALT4O60513 344 aa7.08□□□□□ -1.28
SMC4-223ENST00000493695 CYP7B1O75881 506 aa7.08□□□□□ -1.28
SMC4-223ENST00000493695 HOXC12P31275 282 aa7.08□□□□□ -1.28
SMC4-223ENST00000493695 GJA8P48165 433 aa7.08□□□□□ -1.28
SMC4-223ENST00000493695 KCNAB2Q13303 367 aa7.08□□□□□ -1.28
SMC4-223ENST00000493695 PRSS53Q2L4Q9 553 aa7.08□□□□□ -1.28
SMC4-223ENST00000493695 PRR31Q5SQ13 230 aa7.08□□□□□ -1.28
SMC4-223ENST00000493695 TRMT10BQ6PF06 316 aaKnown RBP7.08□□□□□ -1.28
SMC4-223ENST00000493695 C6orf15Q6UXA7 325 aaPredicted RBP7.08□□□□□ -1.28
SMC4-223ENST00000493695 TMC5Q6UXY8 1006 aa7.08□□□□□ -1.28
SMC4-223ENST00000493695 CCDC103Q8IW40 242 aa7.08□□□□□ -1.28
SMC4-223ENST00000493695 PPIL6Q8IXY8 311 aa7.08□□□□□ -1.28
SMC4-223ENST00000493695 SEC16BQ96JE7 1060 aa7.08□□□□□ -1.28
SMC4-223ENST00000493695 MRGPRX3Q96LB0 322 aa7.08□□□□□ -1.28
SMC4-223ENST00000493695 CLDND1Q9NY35 253 aa7.08□□□□□ -1.28
SMC4-223ENST00000493695 X6R8D5 127 aa7.08□□□□□ -1.28
SMC4-223ENST00000493695 C9orf118A6NHY6 69 aa7.07□□□□□ -1.28
SMC4-223ENST00000493695 DGKIO75912 1065 aa7.07□□□□□ -1.28
SMC4-223ENST00000493695 ITGAVP06756 1048 aa7.07□□□□□ -1.28
SMC4-223ENST00000493695 HMGA2P52926 109 aa7.07□□□□□ -1.28
SMC4-223ENST00000493695 HDLBPQ00341 1268 aaKnown RBP7.07□□□□□ -1.28
SMC4-223ENST00000493695 NLRP10Q86W26 655 aa7.07□□□□□ -1.28
SMC4-223ENST00000493695 CIR1Q86X95 450 aaPredicted RBP7.07□□□□□ -1.28
SMC4-223ENST00000493695 ZFPM1Q8IX07 1006 aa7.07□□□□□ -1.28
SMC4-223ENST00000493695 KBTBD2Q8IY47 623 aa7.07□□□□□ -1.28
SMC4-223ENST00000493695 CDK5RAP1Q96SZ6 601 aaKnown RBP7.07□□□□□ -1.28
SMC4-223ENST00000493695 SCAND2PQ9GZW5 306 aaPredicted RBP7.07□□□□□ -1.28
SMC4-223ENST00000493695 DTLQ9NZJ0 730 aa7.07□□□□□ -1.28
SMC4-223ENST00000493695 PPP4R1LQ9P1A2 415 aa7.07□□□□□ -1.28
SMC4-223ENST00000493695 STRIP2Q9ULQ0 834 aa7.07□□□□□ -1.28
SMC4-223ENST00000493695 MRVI1Q9Y6F6 885 aa7.07□□□□□ -1.28
SMC4-223ENST00000493695 DDAH1O94760 285 aa7.06□□□□□ -1.28
SMC4-223ENST00000493695 ZNF28P17035 718 aa7.06□□□□□ -1.28
SMC4-223ENST00000493695 TACR2P21452 398 aa7.06□□□□□ -1.28
SMC4-223ENST00000493695 MLLT6P55198 1093 aaPredicted RBP7.06□□□□□ -1.28
SMC4-223ENST00000493695 LSAMPQ13449 338 aa7.06□□□□□ -1.28
SMC4-223ENST00000493695 ICAM4Q14773 271 aa7.06□□□□□ -1.28
SMC4-223ENST00000493695 SF1Q15637 639 aaKnown RBP7.06□□□□□ -1.28
SMC4-223ENST00000493695 RCBTB1Q8NDN9 531 aa7.06□□□□□ -1.28
SMC4-223ENST00000493695 KLC2Q9H0B6 622 aa7.06□□□□□ -1.28
SMC4-223ENST00000493695 ACBD3Q9H3P7 528 aa7.06□□□□□ -1.28
SMC4-223ENST00000493695 BARX1Q9HBU1 254 aaPredicted RBP7.06□□□□□ -1.28
SMC4-223ENST00000493695 FBXL7Q9UJT9 491 aa7.06□□□□□ -1.28
SMC4-223ENST00000493695 ZNF652Q9Y2D9 606 aa7.06□□□□□ -1.28
SMC4-223ENST00000493695 CPP00450 1065 aa7.05□□□□□ -1.28
SMC4-223ENST00000493695 LCP1P13796 627 aa7.05□□□□□ -1.28
SMC4-223ENST00000493695 PPP2CBP62714 309 aa7.05□□□□□ -1.28
SMC4-223ENST00000493695 PPP2CAP67775 309 aa7.05□□□□□ -1.28
SMC4-223ENST00000493695 TEPPQ6URK8 271 aa7.05□□□□□ -1.28
SMC4-223ENST00000493695 USP51Q70EK9 711 aa7.05□□□□□ -1.28
SMC4-223ENST00000493695 ZNF227Q86WZ6 799 aa7.05□□□□□ -1.28
SMC4-223ENST00000493695 IGDCC4Q8TDY8 1250 aa7.05□□□□□ -1.28
SMC4-223ENST00000493695 SORCS2Q96PQ0 1159 aa7.05□□□□□ -1.28
SMC4-223ENST00000493695 SSBP3Q9BWW4 388 aaPredicted RBP7.05□□□□□ -1.28
SMC4-223ENST00000493695 CCSER2Q9H7U1 834 aa7.05□□□□□ -1.28
SMC4-223ENST00000493695 TSC22D4Q9Y3Q8 395 aa7.05□□□□□ -1.28
SMC4-223ENST00000493695 TCRBV5S2A0A599 114 aa7.04□□□□□ -1.28
SMC4-223ENST00000493695 SMAD7O15105 426 aaKnown RBP7.04□□□□□ -1.28
SMC4-223ENST00000493695 SSBP05455 408 aaKnown RBP eCLIP7.04□□□□□ -1.28
SMC4-223ENST00000493695 LTBRP36941 435 aa7.04□□□□□ -1.28
SMC4-223ENST00000493695 CYP4F3Q08477 520 aa7.04□□□□□ -1.28
SMC4-223ENST00000493695 FAM178BQ8IXR5 827 aa7.04□□□□□ -1.28
SMC4-223ENST00000493695 WRNIP1Q96S55 665 aa7.04□□□□□ -1.28
SMC4-223ENST00000493695 TMEM209Q96SK2 561 aa7.04□□□□□ -1.28
SMC4-223ENST00000493695 ACTR10Q9NZ32 417 aa7.04□□□□□ -1.28
SMC4-223ENST00000493695 MYOTQ9UBF9 498 aa7.04□□□□□ -1.28
SMC4-223ENST00000493695 TCAF1Q9Y4C2 921 aa7.04□□□□□ -1.28
SMC4-223ENST00000493695 B2RBV5 119 aa7.03□□□□□ -1.28
SMC4-223ENST00000493695 H7BY64 318 aa7.03□□□□□ -1.28
SMC4-223ENST00000493695 MAFKO60675 156 aa7.03□□□□□ -1.28
SMC4-223ENST00000493695 AMHP03971 560 aa7.03□□□□□ -1.28
SMC4-223ENST00000493695 PHF19Q5T6S3 580 aa7.03□□□□□ -1.28
SMC4-223ENST00000493695 CCDC140Q96MF4 163 aa7.03□□□□□ -1.28
SMC4-223ENST00000493695 YTHDC1Q96MU7 727 aaKnown RBP7.03□□□□□ -1.28
SMC4-223ENST00000493695 PTPN18Q99952 460 aa7.03□□□□□ -1.28
SMC4-223ENST00000493695 MRIQ9BWK5 157 aa7.03□□□□□ -1.28
SMC4-223ENST00000493695 VPS11Q9H270 941 aa7.03□□□□□ -1.28
SMC4-223ENST00000493695 EPB41L1Q9H4G0 881 aa7.03□□□□□ -1.28
SMC4-223ENST00000493695 GPR42O15529 346 aa7.02□□□□□ -1.29
SMC4-223ENST00000493695 VAMP1P23763 118 aa7.02□□□□□ -1.29
SMC4-223ENST00000493695 GRIN1Q05586 938 aa7.02□□□□□ -1.29
SMC4-223ENST00000493695 Q8N1Y9 231 aa7.02□□□□□ -1.29
SMC4-223ENST00000493695 MRRFQ96E11 262 aaKnown RBP7.02□□□□□ -1.29
SMC4-223ENST00000493695 RBPJLQ9UBG7 517 aa7.02□□□□□ -1.29
SMC4-223ENST00000493695 ARNTLO00327 626 aa7.01□□□□□ -1.29
SMC4-223ENST00000493695 KRIT1O00522 736 aa7.01□□□□□ -1.29
SMC4-223ENST00000493695 SUSD5O60279 629 aa7.01□□□□□ -1.29
SMC4-223ENST00000493695 FZD7O75084 574 aa7.01□□□□□ -1.29
SMC4-223ENST00000493695 FBXO21O94952 628 aa7.01□□□□□ -1.29
SMC4-223ENST00000493695 LRG1P02750 347 aa7.01□□□□□ -1.29
SMC4-223ENST00000493695 NFATC3Q12968 1075 aa7.01□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms