RNA–Protein interactions for RNA: ENST00000493653.1

PDS5B-208, Transcript of PDS5 cohesin associated factor B, humanhuman

TSL 1 (best)

Gene PDS5B, Length 972 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDS5B-208ENST00000493653 DGKDQ16760 1214 aa13.67□□□□□ -0.22
PDS5B-208ENST00000493653 MB21D2Q8IYB1 491 aaPredicted RBP13.67□□□□□ -0.22
PDS5B-208ENST00000493653 KCTD17Q8N5Z5 321 aa13.67□□□□□ -0.22
PDS5B-208ENST00000493653 CCDC155Q8N6L0 562 aa13.67□□□□□ -0.22
PDS5B-208ENST00000493653 KRI1Q8N9T8 703 aaKnown RBP13.67□□□□□ -0.22
PDS5B-208ENST00000493653 RETREG2Q8NC44 543 aa13.67□□□□□ -0.22
PDS5B-208ENST00000493653 PIBF1Q8WXW3 757 aa13.67□□□□□ -0.22
PDS5B-208ENST00000493653 KAT2BQ92831 832 aa13.67□□□□□ -0.22
PDS5B-208ENST00000493653 SLC28A3Q9HAS3 691 aa13.67□□□□□ -0.22
PDS5B-208ENST00000493653 DDX41Q9UJV9 622 aaKnown RBP13.67□□□□□ -0.22
PDS5B-208ENST00000493653 RBM8AQ9Y5S9 174 aaKnown RBP13.67□□□□□ -0.22
PDS5B-208ENST00000493653 BAZ2BQ9UIF8 2168 aaKnown RBP13.66□□□□□ -0.22
PDS5B-208ENST00000493653 TRANK1O15050 2925 aa13.66□□□□□ -0.22
PDS5B-208ENST00000493653 TRIM66O15016 1216 aa13.66□□□□□ -0.22
PDS5B-208ENST00000493653 CYTH3O43739 400 aa13.66□□□□□ -0.22
PDS5B-208ENST00000493653 ACTN1P12814 892 aa13.66□□□□□ -0.22
PDS5B-208ENST00000493653 CASTP20810 708 aaKnown RBP13.66□□□□□ -0.22
PDS5B-208ENST00000493653 UBA1P22314 1058 aaKnown RBP13.66□□□□□ -0.22
PDS5B-208ENST00000493653 TROAPQ12815 778 aa13.66□□□□□ -0.22
PDS5B-208ENST00000493653 PGM5Q15124 567 aa13.66□□□□□ -0.22
PDS5B-208ENST00000493653 GDF6Q6KF10 455 aaPredicted RBP13.66□□□□□ -0.22
PDS5B-208ENST00000493653 CATIPQ7Z7H3 387 aa13.66□□□□□ -0.22
PDS5B-208ENST00000493653 FCHSD1Q86WN1 690 aa13.66□□□□□ -0.22
PDS5B-208ENST00000493653 PPTC7Q8NI37 304 aa13.66□□□□□ -0.22
PDS5B-208ENST00000493653 PPM1EQ8WY54 764 aa13.66□□□□□ -0.22
PDS5B-208ENST00000493653 EMID1Q96A84 441 aaPredicted RBP13.66□□□□□ -0.22
PDS5B-208ENST00000493653 MYL10Q9BUA6 226 aa13.66□□□□□ -0.22
PDS5B-208ENST00000493653 FTOQ9C0B1 505 aaKnown RBP eCLIP13.66□□□□□ -0.22
PDS5B-208ENST00000493653 RIOX1Q9H6W3 641 aa13.66□□□□□ -0.22
PDS5B-208ENST00000493653 MUC3AQ02505 3323 aa13.65□□□□□ -0.22
PDS5B-208ENST00000493653 GCOM1H8Y6P7 765 aaPredicted RBP13.65□□□□□ -0.22
PDS5B-208ENST00000493653 RGS20O76081 388 aa13.65□□□□□ -0.22
PDS5B-208ENST00000493653 F2P00734 622 aa13.65□□□□□ -0.22
PDS5B-208ENST00000493653 IQCF3P0C7M6 154 aa13.65□□□□□ -0.22
PDS5B-208ENST00000493653 POLR2MP0CAP2 368 aa13.65□□□□□ -0.22
PDS5B-208ENST00000493653 IGFBP4P22692 258 aa13.65□□□□□ -0.22
PDS5B-208ENST00000493653 CCND2P30279 289 aa13.65□□□□□ -0.22
PDS5B-208ENST00000493653 PSEN2P49810 448 aa13.65□□□□□ -0.22
PDS5B-208ENST00000493653 ADGRE1Q14246 886 aa13.65□□□□□ -0.22
PDS5B-208ENST00000493653 MFSD10Q14728 455 aa13.65□□□□□ -0.22
PDS5B-208ENST00000493653 SESTD1Q86VW0 696 aa13.65□□□□□ -0.22
PDS5B-208ENST00000493653 DHX37Q8IY37 1157 aaKnown RBP13.65□□□□□ -0.22
PDS5B-208ENST00000493653 C7orf31Q8N865 590 aa13.65□□□□□ -0.22
PDS5B-208ENST00000493653 CAGE1Q8TC20 777 aa13.65□□□□□ -0.22
PDS5B-208ENST00000493653 DHX38Q92620 1227 aaKnown RBP13.65□□□□□ -0.22
PDS5B-208ENST00000493653 CTAGE1Q96RT6 745 aa13.65□□□□□ -0.22
PDS5B-208ENST00000493653 ALG1Q9BT22 464 aa13.65□□□□□ -0.22
PDS5B-208ENST00000493653 KATNAL1Q9BW62 490 aa13.65□□□□□ -0.22
PDS5B-208ENST00000493653 PCDHA11Q9Y5I1 949 aa13.65□□□□□ -0.22
PDS5B-208ENST00000493653 MYO9BQ13459 2157 aa13.65□□□□□ -0.22
PDS5B-208ENST00000493653 COL4A4P53420 1690 aaPredicted RBP13.64□□□□□ -0.23
PDS5B-208ENST00000493653 PNMA6FA0A0J9YX94 578 aa13.64□□□□□ -0.23
PDS5B-208ENST00000493653 DDAH1O94760 285 aa13.64□□□□□ -0.23
PDS5B-208ENST00000493653 GGPS1O95749 300 aa13.64□□□□□ -0.23
PDS5B-208ENST00000493653 CA3P07451 260 aa13.64□□□□□ -0.23
PDS5B-208ENST00000493653 PYGBP11216 843 aa13.64□□□□□ -0.23
PDS5B-208ENST00000493653 TRAF1Q13077 416 aa13.64□□□□□ -0.23
PDS5B-208ENST00000493653 LAMC2Q13753 1193 aa13.64□□□□□ -0.23
PDS5B-208ENST00000493653 KIAA0753Q2KHM9 967 aa13.64□□□□□ -0.23
PDS5B-208ENST00000493653 CASC1Q6TDU7 716 aa13.64□□□□□ -0.23
PDS5B-208ENST00000493653 LRRC8DQ7L1W4 858 aa13.64□□□□□ -0.23
PDS5B-208ENST00000493653 ZNF654Q8IZM8 581 aa13.64□□□□□ -0.23
PDS5B-208ENST00000493653 AFAP1L1Q8TED9 768 aa13.64□□□□□ -0.23
PDS5B-208ENST00000493653 GPKOWQ92917 476 aaPredicted RBP eCLIP13.64□□□□□ -0.23
PDS5B-208ENST00000493653 MAP4K1Q92918 833 aa13.64□□□□□ -0.23
PDS5B-208ENST00000493653 SPATA33Q96N06 139 aa13.64□□□□□ -0.23
PDS5B-208ENST00000493653 SLC9A7Q96T83 725 aa13.64□□□□□ -0.23
PDS5B-208ENST00000493653 LY9Q9HBG7 655 aa13.64□□□□□ -0.23
PDS5B-208ENST00000493653 PRDM6Q9NQX0 595 aa13.64□□□□□ -0.23
PDS5B-208ENST00000493653 MAP3K20Q9NYL2 800 aaKnown RBP13.64□□□□□ -0.23
PDS5B-208ENST00000493653 HDAC6Q9UBN7 1215 aa13.64□□□□□ -0.23
PDS5B-208ENST00000493653 GTF2IRD1Q9UHL9 959 aa13.64□□□□□ -0.23
PDS5B-208ENST00000493653 FRMPD4Q14CM0 1322 aa13.64□□□□□ -0.23
PDS5B-208ENST00000493653 TET1Q8NFU7 2136 aa13.63□□□□□ -0.23
PDS5B-208ENST00000493653 PTPRSQ13332 1948 aa13.63□□□□□ -0.23
PDS5B-208ENST00000493653 PRC1O43663 620 aa13.63□□□□□ -0.23
PDS5B-208ENST00000493653 SELPP16109 830 aa13.63□□□□□ -0.23
PDS5B-208ENST00000493653 HSDL1Q3SXM5 330 aa13.63□□□□□ -0.23
PDS5B-208ENST00000493653 CELF3Q5SZQ8 465 aaKnown RBP13.63□□□□□ -0.23
PDS5B-208ENST00000493653 MICALL1Q8N3F8 863 aa13.63□□□□□ -0.23
PDS5B-208ENST00000493653 SAMD3Q8N6K7 520 aa13.63□□□□□ -0.23
PDS5B-208ENST00000493653 CTCFLQ8NI51 663 aaPredicted RBP13.63□□□□□ -0.23
PDS5B-208ENST00000493653 REV3LO60673 3130 aa13.63□□□□□ -0.23
PDS5B-208ENST00000493653 XIRP2A4UGR9 3374 aa13.63□□□□□ -0.23
PDS5B-208ENST00000493653 BAIAP3O94812 1187 aa13.62□□□□□ -0.23
PDS5B-208ENST00000493653 PRR29P0C7W0 189 aa13.62□□□□□ -0.23
PDS5B-208ENST00000493653 HOXD8P13378 290 aaPredicted RBP13.62□□□□□ -0.23
PDS5B-208ENST00000493653 KIF5BP33176 963 aa13.62□□□□□ -0.23
PDS5B-208ENST00000493653 KCNJ6P48051 423 aa13.62□□□□□ -0.23
PDS5B-208ENST00000493653 CCDC85BQ15834 202 aaPredicted RBP13.62□□□□□ -0.23
PDS5B-208ENST00000493653 MYSM1Q5VVJ2 828 aa13.62□□□□□ -0.23
PDS5B-208ENST00000493653 KCNV1Q6PIU1 500 aa13.62□□□□□ -0.23
PDS5B-208ENST00000493653 NFXL1Q6ZNB6 911 aa13.62□□□□□ -0.23
PDS5B-208ENST00000493653 VSIG10LQ86VR7 867 aa13.62□□□□□ -0.23
PDS5B-208ENST00000493653 RASEFQ8IZ41 740 aa13.62□□□□□ -0.23
PDS5B-208ENST00000493653 IGDCC4Q8TDY8 1250 aa13.62□□□□□ -0.23
PDS5B-208ENST00000493653 RRP36Q96EU6 259 aaKnown RBP13.62□□□□□ -0.23
PDS5B-208ENST00000493653 SPZ1Q9BXG8 430 aa13.62□□□□□ -0.23
PDS5B-208ENST00000493653 LSG1Q9H089 658 aaKnown RBP13.62□□□□□ -0.23
PDS5B-208ENST00000493653 THEGQ9P2T0 379 aa13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms