RNA–Protein interactions for RNA: ENST00000493647.1

RHBDF1-211, Transcript of rhomboid 5 homolog 1, humanhuman

TSL 3

Gene RHBDF1, Length 935 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDF1-211ENST00000493647 DDX41Q9UJV9 622 aaKnown RBP13.78□□□□□ -0.2
RHBDF1-211ENST00000493647 GNEQ9Y223 722 aaKnown RBP13.78□□□□□ -0.2
RHBDF1-211ENST00000493647 ZDHHC9Q9Y397 364 aa13.78□□□□□ -0.2
RHBDF1-211ENST00000493647 FIBPO43427 364 aa13.77□□□□□ -0.21
RHBDF1-211ENST00000493647 SLC37A4O43826 429 aa13.77□□□□□ -0.21
RHBDF1-211ENST00000493647 ATP9AO75110 1047 aa13.77□□□□□ -0.21
RHBDF1-211ENST00000493647 TXNP10599 105 aaKnown RBP13.77□□□□□ -0.21
RHBDF1-211ENST00000493647 AKR1A1P14550 325 aa13.77□□□□□ -0.21
RHBDF1-211ENST00000493647 UBA1P22314 1058 aaKnown RBP13.77□□□□□ -0.21
RHBDF1-211ENST00000493647 ZNF76P36508 570 aa13.77□□□□□ -0.21
RHBDF1-211ENST00000493647 TNFAIP2Q03169 654 aa13.77□□□□□ -0.21
RHBDF1-211ENST00000493647 NBR1Q14596 966 aa13.77□□□□□ -0.21
RHBDF1-211ENST00000493647 DUSP28Q4G0W2 176 aa13.77□□□□□ -0.21
RHBDF1-211ENST00000493647 PRR16Q569H4 304 aa13.77□□□□□ -0.21
RHBDF1-211ENST00000493647 FOXD4L5Q5VV16 416 aaPredicted RBP13.77□□□□□ -0.21
RHBDF1-211ENST00000493647 MOXD1Q6UVY6 613 aa13.77□□□□□ -0.21
RHBDF1-211ENST00000493647 NIPA1Q7RTP0 329 aa13.77□□□□□ -0.21
RHBDF1-211ENST00000493647 NLRX1Q86UT6 975 aa13.77□□□□□ -0.21
RHBDF1-211ENST00000493647 FOXD4L4Q8WXT5 416 aaPredicted RBP13.77□□□□□ -0.21
RHBDF1-211ENST00000493647 RNF208Q9H0X6 261 aa13.77□□□□□ -0.21
RHBDF1-211ENST00000493647 KCNH7Q9NS40 1196 aa13.77□□□□□ -0.21
RHBDF1-211ENST00000493647 PKD2L1Q9P0L9 805 aa13.77□□□□□ -0.21
RHBDF1-211ENST00000493647 TELO2Q9Y4R8 837 aa13.77□□□□□ -0.21
RHBDF1-211ENST00000493647 MRVI1Q9Y6F6 885 aa13.77□□□□□ -0.21
RHBDF1-211ENST00000493647 MYH7BA7E2Y1 1941 aa13.76□□□□□ -0.21
RHBDF1-211ENST00000493647 CTAGE5O15320 804 aa13.76□□□□□ -0.21
RHBDF1-211ENST00000493647 SORBS3O60504 671 aa13.76□□□□□ -0.21
RHBDF1-211ENST00000493647 KCNA2P16389 499 aa13.76□□□□□ -0.21
RHBDF1-211ENST00000493647 ATP2B1P20020 1258 aa13.76□□□□□ -0.21
RHBDF1-211ENST00000493647 ITGB3BPQ13352 177 aaPredicted RBP13.76□□□□□ -0.21
RHBDF1-211ENST00000493647 MTMR1Q13613 665 aa13.76□□□□□ -0.21
RHBDF1-211ENST00000493647 TTLL4Q14679 1199 aa13.76□□□□□ -0.21
RHBDF1-211ENST00000493647 GNPTABQ3T906 1256 aa13.76□□□□□ -0.21
RHBDF1-211ENST00000493647 Q4G0T1 1027 aa13.76□□□□□ -0.21
RHBDF1-211ENST00000493647 PPP4R3AQ6IN85 833 aa13.76□□□□□ -0.21
RHBDF1-211ENST00000493647 FAM173BQ6P4H8 233 aa13.76□□□□□ -0.21
RHBDF1-211ENST00000493647 GJA10Q969M2 543 aa13.76□□□□□ -0.21
RHBDF1-211ENST00000493647 ABHD8Q96I13 439 aa13.76□□□□□ -0.21
RHBDF1-211ENST00000493647 DEFB118Q96PH6 123 aa13.76□□□□□ -0.21
RHBDF1-211ENST00000493647 AGO4Q9HCK5 861 aaKnown RBP13.76□□□□□ -0.21
RHBDF1-211ENST00000493647 MYADML2A6NDP7 307 aa13.75□□□□□ -0.21
RHBDF1-211ENST00000493647 MSH4O15457 936 aa13.75□□□□□ -0.21
RHBDF1-211ENST00000493647 CCNT1O60563 726 aaKnown RBP13.75□□□□□ -0.21
RHBDF1-211ENST00000493647 DUSP11O75319 330 aaKnown RBP13.75□□□□□ -0.21
RHBDF1-211ENST00000493647 BRD1O95696 1058 aa13.75□□□□□ -0.21
RHBDF1-211ENST00000493647 ZSCAN22P10073 491 aaPredicted RBP13.75□□□□□ -0.21
RHBDF1-211ENST00000493647 ARHGAP1Q07960 439 aa13.75□□□□□ -0.21
RHBDF1-211ENST00000493647 TTC38Q5R3I4 469 aa13.75□□□□□ -0.21
RHBDF1-211ENST00000493647 MYSM1Q5VVJ2 828 aa13.75□□□□□ -0.21
RHBDF1-211ENST00000493647 POTEDQ86YR6 584 aa13.75□□□□□ -0.21
RHBDF1-211ENST00000493647 UPF3AQ9H1J1 476 aaKnown RBP13.75□□□□□ -0.21
RHBDF1-211ENST00000493647 DDX25Q9UHL0 483 aaKnown RBP13.75□□□□□ -0.21
RHBDF1-211ENST00000493647 PCDHB6Q9Y5E3 794 aa13.75□□□□□ -0.21
RHBDF1-211ENST00000493647 SYNRGQ9UMZ2 1314 aa13.74□□□□□ -0.21
RHBDF1-211ENST00000493647 DHX15O43143 795 aaKnown RBP13.74□□□□□ -0.21
RHBDF1-211ENST00000493647 DYNC1LI2O43237 492 aaPredicted RBP13.74□□□□□ -0.21
RHBDF1-211ENST00000493647 ADAMTS4O75173 837 aa13.74□□□□□ -0.21
RHBDF1-211ENST00000493647 GGPS1O95749 300 aa13.74□□□□□ -0.21
RHBDF1-211ENST00000493647 PGK1P00558 417 aa13.74□□□□□ -0.21
RHBDF1-211ENST00000493647 GH1P01241 217 aa13.74□□□□□ -0.21
RHBDF1-211ENST00000493647 GJB1P08034 283 aa13.74□□□□□ -0.21
RHBDF1-211ENST00000493647 TGFB3P10600 412 aa13.74□□□□□ -0.21
RHBDF1-211ENST00000493647 RARBP10826 455 aa13.74□□□□□ -0.21
RHBDF1-211ENST00000493647 GCFC2P16383 781 aaKnown RBP13.74□□□□□ -0.21
RHBDF1-211ENST00000493647 TRAPPC10P48553 1259 aa13.74□□□□□ -0.21
RHBDF1-211ENST00000493647 SETQ01105 290 aaPredicted RBP13.74□□□□□ -0.21
RHBDF1-211ENST00000493647 ZNF174Q15697 407 aa13.74□□□□□ -0.21
RHBDF1-211ENST00000493647 CELF3Q5SZQ8 465 aaKnown RBP13.74□□□□□ -0.21
RHBDF1-211ENST00000493647 KCNV1Q6PIU1 500 aa13.74□□□□□ -0.21
RHBDF1-211ENST00000493647 BRAPQ7Z569 592 aa13.74□□□□□ -0.21
RHBDF1-211ENST00000493647 TLK2Q86UE8 772 aa13.74□□□□□ -0.21
RHBDF1-211ENST00000493647 TNS4Q8IZW8 715 aa13.74□□□□□ -0.21
RHBDF1-211ENST00000493647 ETNPPLQ8TBG4 499 aa13.74□□□□□ -0.21
RHBDF1-211ENST00000493647 U2AF1L4Q8WU68 220 aaKnown RBP13.74□□□□□ -0.21
RHBDF1-211ENST00000493647 HAS1Q92839 578 aa13.74□□□□□ -0.21
RHBDF1-211ENST00000493647 CDHR1Q96JP9 859 aa13.74□□□□□ -0.21
RHBDF1-211ENST00000493647 CRISPLD2Q9H0B8 497 aa13.74□□□□□ -0.21
RHBDF1-211ENST00000493647 TMEM60Q9H2L4 133 aa13.74□□□□□ -0.21
RHBDF1-211ENST00000493647 KCNMB3Q9NPA1 279 aa13.74□□□□□ -0.21
RHBDF1-211ENST00000493647 NKRFO15226 690 aaKnown RBP eCLIP13.73□□□□□ -0.21
RHBDF1-211ENST00000493647 MAFGO15525 162 aa13.73□□□□□ -0.21
RHBDF1-211ENST00000493647 MSCO60682 206 aa13.73□□□□□ -0.21
RHBDF1-211ENST00000493647 FARP2O94887 1054 aaPredicted RBP13.73□□□□□ -0.21
RHBDF1-211ENST00000493647 F13A1P00488 732 aa13.73□□□□□ -0.21
RHBDF1-211ENST00000493647 MCM7P33993 719 aa13.73□□□□□ -0.21
RHBDF1-211ENST00000493647 GJA9P57773 515 aa13.73□□□□□ -0.21
RHBDF1-211ENST00000493647 NKX3-2P78367 333 aa13.73□□□□□ -0.21
RHBDF1-211ENST00000493647 CYFIP1Q7L576 1253 aa13.73□□□□□ -0.21
RHBDF1-211ENST00000493647 C4orf32Q8N8J7 132 aa13.73□□□□□ -0.21
RHBDF1-211ENST00000493647 OR6J1Q8NGC5 347 aa13.73□□□□□ -0.21
RHBDF1-211ENST00000493647 SLC5A5Q92911 643 aa13.73□□□□□ -0.21
RHBDF1-211ENST00000493647 NAP1L4Q99733 375 aaKnown RBP13.73□□□□□ -0.21
RHBDF1-211ENST00000493647 SENP7Q9BQF6 1050 aa13.73□□□□□ -0.21
RHBDF1-211ENST00000493647 ZNF577Q9BSK1 485 aa13.73□□□□□ -0.21
RHBDF1-211ENST00000493647 FTOQ9C0B1 505 aaKnown RBP eCLIP13.73□□□□□ -0.21
RHBDF1-211ENST00000493647 XPNPEP3Q9NQH7 507 aa13.73□□□□□ -0.21
RHBDF1-211ENST00000493647 EIF4ENIF1Q9NRA8 985 aaKnown RBP13.73□□□□□ -0.21
RHBDF1-211ENST00000493647 OGDHLQ9ULD0 1010 aa13.73□□□□□ -0.21
RHBDF1-211ENST00000493647 NOL7Q9UMY1 257 aaKnown RBP13.73□□□□□ -0.21
RHBDF1-211ENST00000493647 Q9Y3F1 56 aa13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 107.4 ms