RNA–Protein interactions for RNA: ENST00000493271.1

SNRNP200-207, Transcript of small nuclear ribonucleoprotein U5 subunit 200, humanhuman

TSL 3

Gene SNRNP200, Length 585 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP200-207ENST00000493271 AMNQ9BXJ7 453 aa12.82□□□□□ -0.36
SNRNP200-207ENST00000493271 COL20A1Q9P218 1284 aa12.82□□□□□ -0.36
SNRNP200-207ENST00000493271 MTUS1Q9ULD2 1270 aa12.82□□□□□ -0.36
SNRNP200-207ENST00000493271 SIP14410 1827 aa12.82□□□□□ -0.36
SNRNP200-207ENST00000493271 COL4A6Q14031 1691 aa12.82□□□□□ -0.36
SNRNP200-207ENST00000493271 DHX16O60231 1041 aaKnown RBP12.81□□□□□ -0.36
SNRNP200-207ENST00000493271 EIF2AK2P19525 551 aaKnown RBP12.81□□□□□ -0.36
SNRNP200-207ENST00000493271 HSD17B4P51659 736 aa12.81□□□□□ -0.36
SNRNP200-207ENST00000493271 NMIQ13287 307 aaPredicted RBP12.81□□□□□ -0.36
SNRNP200-207ENST00000493271 MYSM1Q5VVJ2 828 aa12.81□□□□□ -0.36
SNRNP200-207ENST00000493271 TRAF7Q6Q0C0 670 aa12.81□□□□□ -0.36
SNRNP200-207ENST00000493271 SPRED2Q7Z698 418 aa12.81□□□□□ -0.36
SNRNP200-207ENST00000493271 TMCO2Q7Z6W1 182 aaPredicted RBP12.81□□□□□ -0.36
SNRNP200-207ENST00000493271 SERINC5Q86VE9 423 aa12.81□□□□□ -0.36
SNRNP200-207ENST00000493271 TBC1D5Q92609 795 aa12.81□□□□□ -0.36
SNRNP200-207ENST00000493271 MRPL38Q96DV4 380 aaKnown RBP12.81□□□□□ -0.36
SNRNP200-207ENST00000493271 KCNH6Q9H252 994 aa12.81□□□□□ -0.36
SNRNP200-207ENST00000493271 C11orf16Q9NQ32 467 aa12.81□□□□□ -0.36
SNRNP200-207ENST00000493271 NEDD4P46934 1319 aa12.81□□□□□ -0.36
SNRNP200-207ENST00000493271 GRXCR2A6NFK2 248 aa12.8□□□□□ -0.36
SNRNP200-207ENST00000493271 RSPH10B2B2RC85 870 aa12.8□□□□□ -0.36
SNRNP200-207ENST00000493271 TRIM6-TRIM34B2RNG4 842 aa12.8□□□□□ -0.36
SNRNP200-207ENST00000493271 NCK2O43639 380 aa12.8□□□□□ -0.36
SNRNP200-207ENST00000493271 CFBP00751 764 aa12.8□□□□□ -0.36
SNRNP200-207ENST00000493271 RSPH10BP0C881 870 aa12.8□□□□□ -0.36
SNRNP200-207ENST00000493271 KCNA5P22460 613 aa12.8□□□□□ -0.36
SNRNP200-207ENST00000493271 MKRN4PQ13434 485 aaPredicted RBP12.8□□□□□ -0.36
SNRNP200-207ENST00000493271 HDAC1Q13547 482 aaPredicted RBP12.8□□□□□ -0.36
SNRNP200-207ENST00000493271 PLEKHG4Q58EX7 1191 aa12.8□□□□□ -0.36
SNRNP200-207ENST00000493271 CELF3Q5SZQ8 465 aaKnown RBP12.8□□□□□ -0.36
SNRNP200-207ENST00000493271 PTCRAQ6ISU1 281 aaPredicted RBP12.8□□□□□ -0.36
SNRNP200-207ENST00000493271 STOX1Q6ZVD7 989 aa12.8□□□□□ -0.36
SNRNP200-207ENST00000493271 MYOCDQ8IZQ8 938 aa12.8□□□□□ -0.36
SNRNP200-207ENST00000493271 GADD45GIP1Q8TAE8 222 aaPredicted RBP12.8□□□□□ -0.36
SNRNP200-207ENST00000493271 NEK9Q8TD19 979 aa12.8□□□□□ -0.36
SNRNP200-207ENST00000493271 ZSCAN10Q96SZ4 725 aaPredicted RBP12.8□□□□□ -0.36
SNRNP200-207ENST00000493271 PDCD2LQ9BRP1 358 aa12.8□□□□□ -0.36
SNRNP200-207ENST00000493271 ZKSCAN3Q9BRR0 538 aa12.8□□□□□ -0.36
SNRNP200-207ENST00000493271 CNNM2Q9H8M5 875 aa12.8□□□□□ -0.36
SNRNP200-207ENST00000493271 JMJD4Q9H9V9 463 aa12.8□□□□□ -0.36
SNRNP200-207ENST00000493271 PRKAG3Q9UGI9 489 aa12.8□□□□□ -0.36
SNRNP200-207ENST00000493271 HIP1O00291 1037 aa12.79□□□□□ -0.36
SNRNP200-207ENST00000493271 KDM4AO75164 1064 aa12.79□□□□□ -0.36
SNRNP200-207ENST00000493271 ZNF286BP0CG31 522 aa12.79□□□□□ -0.36
SNRNP200-207ENST00000493271 GNAT1P11488 350 aa12.79□□□□□ -0.36
SNRNP200-207ENST00000493271 SSTR3P32745 418 aaPredicted RBP12.79□□□□□ -0.36
SNRNP200-207ENST00000493271 THPOP40225 353 aa12.79□□□□□ -0.36
SNRNP200-207ENST00000493271 MBTPS1Q14703 1052 aa12.79□□□□□ -0.36
SNRNP200-207ENST00000493271 IMMTQ16891 758 aaKnown RBP12.79□□□□□ -0.36
SNRNP200-207ENST00000493271 VSIG10LQ86VR7 867 aa12.79□□□□□ -0.36
SNRNP200-207ENST00000493271 ENAHQ8N8S7 591 aaPredicted RBP12.79□□□□□ -0.36
SNRNP200-207ENST00000493271 DBF4BQ8NFT6 615 aa12.79□□□□□ -0.36
SNRNP200-207ENST00000493271 SEPT8Q92599 483 aa12.79□□□□□ -0.36
SNRNP200-207ENST00000493271 APBB2Q92870 758 aa12.79□□□□□ -0.36
SNRNP200-207ENST00000493271 KHSRPQ92945 711 aaKnown RBP eCLIP12.79□□□□□ -0.36
SNRNP200-207ENST00000493271 SPATA33Q96N06 139 aa12.79□□□□□ -0.36
SNRNP200-207ENST00000493271 KRT23Q9C075 422 aa12.79□□□□□ -0.36
SNRNP200-207ENST00000493271 CPVLQ9H3G5 476 aa12.79□□□□□ -0.36
SNRNP200-207ENST00000493271 LAMA4Q16363 1823 aa12.78□□□□□ -0.36
SNRNP200-207ENST00000493271 C17orf102A2RUQ5 167 aa12.78□□□□□ -0.36
SNRNP200-207ENST00000493271 H3BNC9 293 aa12.78□□□□□ -0.36
SNRNP200-207ENST00000493271 H3BRB1 525 aa12.78□□□□□ -0.36
SNRNP200-207ENST00000493271 STAM2O75886 525 aa12.78□□□□□ -0.36
SNRNP200-207ENST00000493271 GGPS1O95749 300 aa12.78□□□□□ -0.36
SNRNP200-207ENST00000493271 HOXC8P31273 242 aa12.78□□□□□ -0.36
SNRNP200-207ENST00000493271 AAMPQ13685 434 aa12.78□□□□□ -0.36
SNRNP200-207ENST00000493271 CSPP1Q1MSJ5 1256 aa12.78□□□□□ -0.36
SNRNP200-207ENST00000493271 TCTN1Q2MV58 587 aa12.78□□□□□ -0.36
SNRNP200-207ENST00000493271 HSDL1Q3SXM5 330 aa12.78□□□□□ -0.36
SNRNP200-207ENST00000493271 GNPTABQ3T906 1256 aa12.78□□□□□ -0.36
SNRNP200-207ENST00000493271 EPC2Q52LR7 807 aa12.78□□□□□ -0.36
SNRNP200-207ENST00000493271 LIN28BQ6ZN17 250 aaKnown RBP eCLIP12.78□□□□□ -0.36
SNRNP200-207ENST00000493271 BANK1Q8NDB2 785 aa12.78□□□□□ -0.36
SNRNP200-207ENST00000493271 ATP6V0A1Q93050 837 aa12.78□□□□□ -0.36
SNRNP200-207ENST00000493271 TOP1MTQ969P6 601 aa12.78□□□□□ -0.36
SNRNP200-207ENST00000493271 PABPC5Q96DU9 382 aaKnown RBP12.78□□□□□ -0.36
SNRNP200-207ENST00000493271 MTMR8Q96EF0 704 aa12.78□□□□□ -0.36
SNRNP200-207ENST00000493271 YME1L1Q96TA2 773 aa12.78□□□□□ -0.36
SNRNP200-207ENST00000493271 C17orf80Q9BSJ5 609 aa12.78□□□□□ -0.36
SNRNP200-207ENST00000493271 UBAC1Q9BSL1 405 aa12.78□□□□□ -0.36
SNRNP200-207ENST00000493271 TUT1Q9H6E5 874 aaKnown RBP12.78□□□□□ -0.36
SNRNP200-207ENST00000493271 MLXIPQ9HAP2 919 aa12.78□□□□□ -0.36
SNRNP200-207ENST00000493271 CD320Q9NPF0 282 aa12.78□□□□□ -0.36
SNRNP200-207ENST00000493271 RWDD3Q9Y3V2 267 aa12.78□□□□□ -0.36
SNRNP200-207ENST00000493271 PIEZO1Q92508 2521 aa12.78□□□□□ -0.36
SNRNP200-207ENST00000493271 BRWD1Q9NSI6 2320 aa12.77□□□□□ -0.36
SNRNP200-207ENST00000493271 FAM86C2PA6NEL3 165 aa12.77□□□□□ -0.37
SNRNP200-207ENST00000493271 B4E1Z4 1266 aa12.77□□□□□ -0.37
SNRNP200-207ENST00000493271 ZBTB5O15062 677 aa12.77□□□□□ -0.37
SNRNP200-207ENST00000493271 IL9P15248 144 aa12.77□□□□□ -0.37
SNRNP200-207ENST00000493271 SDSP20132 328 aa12.77□□□□□ -0.37
SNRNP200-207ENST00000493271 CCND2P30279 289 aa12.77□□□□□ -0.37
SNRNP200-207ENST00000493271 COL19A1Q14993 1142 aa12.77□□□□□ -0.37
SNRNP200-207ENST00000493271 PGM5Q15124 567 aa12.77□□□□□ -0.37
SNRNP200-207ENST00000493271 FAM117BQ6P1L5 589 aa12.77□□□□□ -0.37
SNRNP200-207ENST00000493271 WNT8BQ93098 351 aa12.77□□□□□ -0.37
SNRNP200-207ENST00000493271 RILPL2Q969X0 211 aa12.77□□□□□ -0.37
SNRNP200-207ENST00000493271 C16orf70Q9BSU1 422 aa12.77□□□□□ -0.37
SNRNP200-207ENST00000493271 DSCC1Q9BVC3 393 aa12.77□□□□□ -0.37
SNRNP200-207ENST00000493271 USP26Q9BXU7 913 aa12.77□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms