RNA–Protein interactions for RNA: ENST00000493220.5

NF1-215, Transcript of neurofibromin 1, humanhuman

TSL 2

Gene NF1, Length 5,691 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NF1-215ENST00000493220 HSP90B2PQ58FF3 399 aa6.96□□□□□ -1.3
NF1-215ENST00000493220 CEP135Q66GS9 1140 aa6.96□□□□□ -1.3
NF1-215ENST00000493220 DYMQ7RTS9 669 aa6.96□□□□□ -1.3
NF1-215ENST00000493220 STAG2Q8N3U4 1231 aa6.96□□□□□ -1.3
NF1-215ENST00000493220 SRBD1Q8N5C6 995 aaKnown RBP6.96□□□□□ -1.3
NF1-215ENST00000493220 TAF4BQ92750 862 aa6.96□□□□□ -1.3
NF1-215ENST00000493220 ATG4CQ96DT6 458 aa6.96□□□□□ -1.3
NF1-215ENST00000493220 WNK4Q96J92 1243 aa6.96□□□□□ -1.3
NF1-215ENST00000493220 ACCSQ96QU6 501 aa6.96□□□□□ -1.3
NF1-215ENST00000493220 TIPINQ9BVW5 301 aa6.96□□□□□ -1.3
NF1-215ENST00000493220 DDX52Q9Y2R4 599 aaKnown RBP eCLIP6.96□□□□□ -1.3
NF1-215ENST00000493220 PAPPAQ13219 1627 aa6.96□□□□□ -1.3
NF1-215ENST00000493220 ESYT2A0FGR8 921 aa6.96□□□□□ -1.3
NF1-215ENST00000493220 ZSCAN12O43309 604 aa6.96□□□□□ -1.3
NF1-215ENST00000493220 PRPF6O94906 941 aaKnown RBP6.96□□□□□ -1.3
NF1-215ENST00000493220 PTPRAP18433 802 aa6.96□□□□□ -1.3
NF1-215ENST00000493220 SFPQP23246 707 aaKnown RBP eCLIP6.96□□□□□ -1.3
NF1-215ENST00000493220 CDC27P30260 824 aa6.96□□□□□ -1.3
NF1-215ENST00000493220 TDRD12Q587J7 1177 aaKnown RBP6.96□□□□□ -1.3
NF1-215ENST00000493220 ISM2Q6H9L7 571 aa6.96□□□□□ -1.3
NF1-215ENST00000493220 ELMSAN1Q6PJG2 1045 aa6.96□□□□□ -1.3
NF1-215ENST00000493220 ANKRD23Q86SG2 305 aa6.96□□□□□ -1.3
NF1-215ENST00000493220 FAM178BQ8IXR5 827 aa6.96□□□□□ -1.3
NF1-215ENST00000493220 ANKRD13CQ8N6S4 541 aa6.96□□□□□ -1.3
NF1-215ENST00000493220 SPC24Q8NBT2 197 aa6.96□□□□□ -1.3
NF1-215ENST00000493220 NEK11Q8NG66 645 aa6.96□□□□□ -1.3
NF1-215ENST00000493220 FAM200AQ8TCP9 573 aa6.96□□□□□ -1.3
NF1-215ENST00000493220 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP6.96□□□□□ -1.3
NF1-215ENST00000493220 SLC9A2Q9UBY0 812 aa6.96□□□□□ -1.3
NF1-215ENST00000493220 SRPRBQ9Y5M8 271 aaKnown RBP6.96□□□□□ -1.3
NF1-215ENST00000493220 RHBDL3P58872 404 aa6.95□□□□□ -1.3
NF1-215ENST00000493220 TTBK2Q6IQ55 1244 aa6.95□□□□□ -1.3
NF1-215ENST00000493220 RNF180Q86T96 592 aa6.95□□□□□ -1.3
NF1-215ENST00000493220 ABI1Q8IZP0 508 aa6.95□□□□□ -1.3
NF1-215ENST00000493220 MYOCDQ8IZQ8 938 aa6.95□□□□□ -1.3
NF1-215ENST00000493220 KCNB2Q92953 911 aa6.95□□□□□ -1.3
NF1-215ENST00000493220 SPAG5Q96R06 1193 aa6.95□□□□□ -1.3
NF1-215ENST00000493220 JMJD4Q9H9V9 463 aa6.95□□□□□ -1.3
NF1-215ENST00000493220 SYNRGQ9UMZ2 1314 aa6.95□□□□□ -1.3
NF1-215ENST00000493220 TXNP10599 105 aaKnown RBP6.95□□□□□ -1.3
NF1-215ENST00000493220 PFKFB1P16118 471 aa6.95□□□□□ -1.3
NF1-215ENST00000493220 INPP5BP32019 993 aa6.95□□□□□ -1.3
NF1-215ENST00000493220 PSMD2Q13200 908 aa6.95□□□□□ -1.3
NF1-215ENST00000493220 VWA3BQ502W6 1294 aa6.95□□□□□ -1.3
NF1-215ENST00000493220 DAGLBQ8NCG7 672 aa6.95□□□□□ -1.3
NF1-215ENST00000493220 MCPH1Q8NEM0 835 aa6.95□□□□□ -1.3
NF1-215ENST00000493220 DNERQ8NFT8 737 aa6.95□□□□□ -1.3
NF1-215ENST00000493220 GPRASP2Q96D09 838 aa6.95□□□□□ -1.3
NF1-215ENST00000493220 TIGD1Q96MW7 591 aa6.95□□□□□ -1.3
NF1-215ENST00000493220 RPS6KC1Q96S38 1066 aa6.95□□□□□ -1.3
NF1-215ENST00000493220 DDX4Q9NQI0 724 aaKnown RBP6.95□□□□□ -1.3
NF1-215ENST00000493220 KMT5AQ9NQR1 393 aa6.95□□□□□ -1.3
NF1-215ENST00000493220 CLIC4Q9Y696 253 aa6.95□□□□□ -1.3
NF1-215ENST00000493220 MYPNQ86TC9 1320 aa6.95□□□□□ -1.3
NF1-215ENST00000493220 LRRIQ4A6NIV6 560 aa6.95□□□□□ -1.3
NF1-215ENST00000493220 EXOC3O60645 756 aa6.95□□□□□ -1.3
NF1-215ENST00000493220 PEX14O75381 377 aa6.95□□□□□ -1.3
NF1-215ENST00000493220 P4HBP07237 508 aaKnown RBP6.95□□□□□ -1.3
NF1-215ENST00000493220 BAATQ14032 418 aaPredicted RBP6.95□□□□□ -1.3
NF1-215ENST00000493220 TRIM14Q14142 442 aa6.95□□□□□ -1.3
NF1-215ENST00000493220 SURF1Q15526 300 aa6.95□□□□□ -1.3
NF1-215ENST00000493220 RDM1Q8NG50 284 aa6.95□□□□□ -1.3
NF1-215ENST00000493220 ANKS1AQ92625 1134 aa6.95□□□□□ -1.3
NF1-215ENST00000493220 C2orf40Q9H1Z8 148 aa6.95□□□□□ -1.3
NF1-215ENST00000493220 SERTAD1Q9UHV2 236 aa6.95□□□□□ -1.3
NF1-215ENST00000493220 UBASH3AP57075 661 aa6.95□□□□□ -1.3
NF1-215ENST00000493220 PSMC5P62195 406 aa6.95□□□□□ -1.3
NF1-215ENST00000493220 TYRO3Q06418 890 aa6.95□□□□□ -1.3
NF1-215ENST00000493220 LAMC2Q13753 1193 aa6.95□□□□□ -1.3
NF1-215ENST00000493220 DCAF17Q5H9S7 520 aaPredicted RBP6.95□□□□□ -1.3
NF1-215ENST00000493220 SMAP1Q8IYB5 467 aaPredicted RBP6.95□□□□□ -1.3
NF1-215ENST00000493220 USP28Q96RU2 1077 aa6.95□□□□□ -1.3
NF1-215ENST00000493220 CSRNP2Q9H175 543 aa6.95□□□□□ -1.3
NF1-215ENST00000493220 JPH1Q9HDC5 661 aaPredicted RBP6.95□□□□□ -1.3
NF1-215ENST00000493220 SCN7AQ01118 1682 aa6.95□□□□□ -1.3
NF1-215ENST00000493220 TJP1Q07157 1748 aa6.94□□□□□ -1.3
NF1-215ENST00000493220 STXBP3O00186 592 aa6.94□□□□□ -1.3
NF1-215ENST00000493220 CYP2B6P20813 491 aa6.94□□□□□ -1.3
NF1-215ENST00000493220 PHKA2P46019 1235 aa6.94□□□□□ -1.3
NF1-215ENST00000493220 HERVK_113P62684 666 aa6.94□□□□□ -1.3
NF1-215ENST00000493220 MYL5Q02045 173 aa6.94□□□□□ -1.3
NF1-215ENST00000493220 TNFAIP2Q03169 654 aa6.94□□□□□ -1.3
NF1-215ENST00000493220 KYAT1Q16773 422 aa6.94□□□□□ -1.3
NF1-215ENST00000493220 SPECC1Q5M775 1068 aa6.94□□□□□ -1.3
NF1-215ENST00000493220 USP17L6PQ6QN14 398 aa6.94□□□□□ -1.3
NF1-215ENST00000493220 TUFT1Q9NNX1 390 aa6.94□□□□□ -1.3
NF1-215ENST00000493220 SCAF8Q9UPN6 1271 aaKnown RBP6.94□□□□□ -1.3
NF1-215ENST00000493220 SPEF2Q9C093 1822 aa6.94□□□□□ -1.3
NF1-215ENST00000493220 MTERF2Q49AM1 385 aa6.94□□□□□ -1.3
NF1-215ENST00000493220 ZNF579Q8NAF0 562 aaKnown RBP6.94□□□□□ -1.3
NF1-215ENST00000493220 SCFD2Q8WU76 684 aa6.94□□□□□ -1.3
NF1-215ENST00000493220 MTRQ99707 1265 aa6.94□□□□□ -1.3
NF1-215ENST00000493220 PHF20Q9BVI0 1012 aa6.94□□□□□ -1.3
NF1-215ENST00000493220 MTIF3Q9H2K0 278 aaKnown RBP6.94□□□□□ -1.3
NF1-215ENST00000493220 SMARCAD1Q9H4L7 1026 aa6.94□□□□□ -1.3
NF1-215ENST00000493220 FKTNO75072 461 aa6.94□□□□□ -1.3
NF1-215ENST00000493220 ANTXR2P58335 489 aa6.94□□□□□ -1.3
NF1-215ENST00000493220 CCDC181Q5TID7 509 aa6.94□□□□□ -1.3
NF1-215ENST00000493220 MKL1Q969V6 931 aa6.94□□□□□ -1.3
NF1-215ENST00000493220 UIMC1Q96RL1 719 aa6.94□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms