RNA–Protein interactions for RNA: ENST00000492959.1

GTF2E1-204, Transcript of general transcription factor IIE subunit 1, humanhuman

TSL 4

Gene GTF2E1, Length 551 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2E1-204ENST00000492959 SAMD3Q8N6K7 520 aa13.21□□□□□ -0.29
GTF2E1-204ENST00000492959 DHX38Q92620 1227 aaKnown RBP13.21□□□□□ -0.29
GTF2E1-204ENST00000492959 HLA-CQ95604 372 aa13.21□□□□□ -0.29
GTF2E1-204ENST00000492959 NECAB3Q96P71 396 aaPredicted RBP13.21□□□□□ -0.29
GTF2E1-204ENST00000492959 RAD9AQ99638 391 aa13.21□□□□□ -0.29
GTF2E1-204ENST00000492959 ALG1Q9BT22 464 aa13.21□□□□□ -0.29
GTF2E1-204ENST00000492959 LMCD1Q9NZU5 365 aa13.21□□□□□ -0.29
GTF2E1-204ENST00000492959 EMSYQ7Z589 1322 aa13.2□□□□□ -0.3
GTF2E1-204ENST00000492959 KLRF2D3W0D1 207 aa13.2□□□□□ -0.3
GTF2E1-204ENST00000492959 HAS3O00219 553 aa13.2□□□□□ -0.3
GTF2E1-204ENST00000492959 NBNO60934 754 aa13.2□□□□□ -0.3
GTF2E1-204ENST00000492959 ARHGEF15O94989 841 aa13.2□□□□□ -0.3
GTF2E1-204ENST00000492959 GJB5O95377 273 aa13.2□□□□□ -0.3
GTF2E1-204ENST00000492959 ZNF286BP0CG31 522 aa13.2□□□□□ -0.3
GTF2E1-204ENST00000492959 NUCB1Q02818 461 aa13.2□□□□□ -0.3
GTF2E1-204ENST00000492959 GPNMBQ14956 572 aa13.2□□□□□ -0.3
GTF2E1-204ENST00000492959 KRT40Q6A162 431 aa13.2□□□□□ -0.3
GTF2E1-204ENST00000492959 MYH7BA7E2Y1 1941 aa13.19□□□□□ -0.3
GTF2E1-204ENST00000492959 PTPRSQ13332 1948 aa13.19□□□□□ -0.3
GTF2E1-204ENST00000492959 LCHNA4D1U4 455 aa13.19□□□□□ -0.3
GTF2E1-204ENST00000492959 ZBTB5O15062 677 aa13.19□□□□□ -0.3
GTF2E1-204ENST00000492959 TGFB3P10600 412 aa13.19□□□□□ -0.3
GTF2E1-204ENST00000492959 MYCLP12524 364 aaPredicted RBP13.19□□□□□ -0.3
GTF2E1-204ENST00000492959 HOXD8P13378 290 aaPredicted RBP13.19□□□□□ -0.3
GTF2E1-204ENST00000492959 DEFB103AP81534 67 aa13.19□□□□□ -0.3
GTF2E1-204ENST00000492959 CELF3Q5SZQ8 465 aaKnown RBP13.19□□□□□ -0.3
GTF2E1-204ENST00000492959 MYSM1Q5VVJ2 828 aa13.19□□□□□ -0.3
GTF2E1-204ENST00000492959 STOX1Q6ZVD7 989 aa13.19□□□□□ -0.3
GTF2E1-204ENST00000492959 SPATA33Q96N06 139 aa13.19□□□□□ -0.3
GTF2E1-204ENST00000492959 TGS1Q96RS0 853 aaKnown RBP13.19□□□□□ -0.3
GTF2E1-204ENST00000492959 PDCD2LQ9BRP1 358 aa13.19□□□□□ -0.3
GTF2E1-204ENST00000492959 PCDHA1Q9Y5I3 950 aa13.19□□□□□ -0.3
GTF2E1-204ENST00000492959 COL4A4P53420 1690 aaPredicted RBP13.18□□□□□ -0.3
GTF2E1-204ENST00000492959 OPLAHO14841 1288 aa13.18□□□□□ -0.3
GTF2E1-204ENST00000492959 LPXNO60711 386 aa13.18□□□□□ -0.3
GTF2E1-204ENST00000492959 LGR5O75473 907 aa13.18□□□□□ -0.3
GTF2E1-204ENST00000492959 GGPS1O95749 300 aa13.18□□□□□ -0.3
GTF2E1-204ENST00000492959 CCND2P30279 289 aa13.18□□□□□ -0.3
GTF2E1-204ENST00000492959 ERVK-21P61565 698 aa13.18□□□□□ -0.3
GTF2E1-204ENST00000492959 TRDNQ13061 729 aa13.18□□□□□ -0.3
GTF2E1-204ENST00000492959 TRIM71Q2Q1W2 868 aaKnown RBP13.18□□□□□ -0.3
GTF2E1-204ENST00000492959 ZNF618Q5T7W0 954 aa13.18□□□□□ -0.3
GTF2E1-204ENST00000492959 VSIG10LQ86VR7 867 aa13.18□□□□□ -0.3
GTF2E1-204ENST00000492959 STAG2Q8N3U4 1231 aa13.18□□□□□ -0.3
GTF2E1-204ENST00000492959 MTMR8Q96EF0 704 aa13.18□□□□□ -0.3
GTF2E1-204ENST00000492959 PALM3A6NDB9 673 aaPredicted RBP13.17□□□□□ -0.3
GTF2E1-204ENST00000492959 GCOM1H8Y6P7 765 aaPredicted RBP13.17□□□□□ -0.3
GTF2E1-204ENST00000492959 AMHP03971 560 aa13.17□□□□□ -0.3
GTF2E1-204ENST00000492959 POLR2MP0CAP2 368 aa13.17□□□□□ -0.3
GTF2E1-204ENST00000492959 HOXA13P31271 388 aaPredicted RBP13.17□□□□□ -0.3
GTF2E1-204ENST00000492959 PGM5Q15124 567 aa13.17□□□□□ -0.3
GTF2E1-204ENST00000492959 SEC23AQ15436 765 aa13.17□□□□□ -0.3
GTF2E1-204ENST00000492959 HSDL1Q3SXM5 330 aa13.17□□□□□ -0.3
GTF2E1-204ENST00000492959 TMCO2Q7Z6W1 182 aaPredicted RBP13.17□□□□□ -0.3
GTF2E1-204ENST00000492959 GDPD5Q8WTR4 605 aa13.17□□□□□ -0.3
GTF2E1-204ENST00000492959 SUGCTQ9HAC7 445 aa13.17□□□□□ -0.3
GTF2E1-204ENST00000492959 MLXIPQ9HAP2 919 aa13.17□□□□□ -0.3
GTF2E1-204ENST00000492959 MAD2L2Q9UI95 211 aa13.17□□□□□ -0.3
GTF2E1-204ENST00000492959 INSL6Q9Y581 213 aa13.17□□□□□ -0.3
GTF2E1-204ENST00000492959 ERICH2A1L162 156 aa13.16□□□□□ -0.3
GTF2E1-204ENST00000492959 LINC01553A4QN01 128 aa13.16□□□□□ -0.3
GTF2E1-204ENST00000492959 RSPH10B2B2RC85 870 aa13.16□□□□□ -0.3
GTF2E1-204ENST00000492959 PPP1R11O60927 126 aaPredicted RBP13.16□□□□□ -0.3
GTF2E1-204ENST00000492959 RGS20O76081 388 aa13.16□□□□□ -0.3
GTF2E1-204ENST00000492959 RSPH10BP0C881 870 aa13.16□□□□□ -0.3
GTF2E1-204ENST00000492959 UBA1P22314 1058 aaKnown RBP13.16□□□□□ -0.3
GTF2E1-204ENST00000492959 THPOP40225 353 aa13.16□□□□□ -0.3
GTF2E1-204ENST00000492959 GNPTABQ3T906 1256 aa13.16□□□□□ -0.3
GTF2E1-204ENST00000492959 TRAF7Q6Q0C0 670 aa13.16□□□□□ -0.3
GTF2E1-204ENST00000492959 SPRED2Q7Z698 418 aa13.16□□□□□ -0.3
GTF2E1-204ENST00000492959 SERINC5Q86VE9 423 aa13.16□□□□□ -0.3
GTF2E1-204ENST00000492959 HOMER1Q86YM7 354 aa13.16□□□□□ -0.3
GTF2E1-204ENST00000492959 MTUS1Q9ULD2 1270 aa13.16□□□□□ -0.3
GTF2E1-204ENST00000492959 SIP14410 1827 aa13.16□□□□□ -0.3
GTF2E1-204ENST00000492959 C17orf102A2RUQ5 167 aa13.15□□□□□ -0.3
GTF2E1-204ENST00000492959 H3BRB1 525 aa13.15□□□□□ -0.3
GTF2E1-204ENST00000492959 NOP56O00567 594 aaKnown RBP13.15□□□□□ -0.3
GTF2E1-204ENST00000492959 CAND2O75155 1236 aa13.15□□□□□ -0.3
GTF2E1-204ENST00000492959 STAM2O75886 525 aa13.15□□□□□ -0.3
GTF2E1-204ENST00000492959 IGHDP01880 384 aa13.15□□□□□ -0.3
GTF2E1-204ENST00000492959 PLA2G5P39877 138 aa13.15□□□□□ -0.3
GTF2E1-204ENST00000492959 ZNF200P98182 395 aaPredicted RBP13.15□□□□□ -0.3
GTF2E1-204ENST00000492959 MBTPS1Q14703 1052 aa13.15□□□□□ -0.3
GTF2E1-204ENST00000492959 GRM4Q14833 912 aa13.15□□□□□ -0.3
GTF2E1-204ENST00000492959 SART3Q15020 963 aaKnown RBP13.15□□□□□ -0.3
GTF2E1-204ENST00000492959 TCTN1Q2MV58 587 aa13.15□□□□□ -0.3
GTF2E1-204ENST00000492959 FAM117BQ6P1L5 589 aa13.15□□□□□ -0.3
GTF2E1-204ENST00000492959 FCHSD1Q86WN1 690 aa13.15□□□□□ -0.3
GTF2E1-204ENST00000492959 IL31RAQ8NI17 732 aa13.15□□□□□ -0.3
GTF2E1-204ENST00000492959 ATP6V0A1Q93050 837 aa13.15□□□□□ -0.3
GTF2E1-204ENST00000492959 WNT8BQ93098 351 aa13.15□□□□□ -0.3
GTF2E1-204ENST00000492959 FAM122AQ96E09 287 aa13.15□□□□□ -0.3
GTF2E1-204ENST00000492959 C16orf70Q9BSU1 422 aa13.15□□□□□ -0.3
GTF2E1-204ENST00000492959 TUT1Q9H6E5 874 aaKnown RBP13.15□□□□□ -0.3
GTF2E1-204ENST00000492959 RIOX1Q9H6W3 641 aa13.15□□□□□ -0.3
GTF2E1-204ENST00000492959 RAPGEFL1Q9UHV5 662 aa13.15□□□□□ -0.3
GTF2E1-204ENST00000492959 PNMA6FA0A0J9YX94 578 aa13.14□□□□□ -0.31
GTF2E1-204ENST00000492959 IFIT3O14879 490 aaKnown RBP13.14□□□□□ -0.31
GTF2E1-204ENST00000492959 SORBS3O60504 671 aa13.14□□□□□ -0.31
GTF2E1-204ENST00000492959 GNAT1P11488 350 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms