RNA–Protein interactions for RNA: ENST00000492466.2

SS18L1-205, Transcript of SS18L1, nBAF chromatin remodeling complex subunit, humanhuman

TSL 5

Gene SS18L1, Length 899 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18L1-205ENST00000492466 SLC4A7Q9Y6M7 1214 aa16.93■□□□□ 0.3
SS18L1-205ENST00000492466 KIAA1217Q5T5P2 1943 aa16.93■□□□□ 0.3
SS18L1-205ENST00000492466 PNMA6FA0A0J9YX94 578 aa16.92■□□□□ 0.3
SS18L1-205ENST00000492466 B4DLN1 442 aa16.92■□□□□ 0.3
SS18L1-205ENST00000492466 PITPNM1O00562 1244 aa16.92■□□□□ 0.3
SS18L1-205ENST00000492466 CFBP00751 764 aa16.92■□□□□ 0.3
SS18L1-205ENST00000492466 PFKMP08237 780 aa16.92■□□□□ 0.3
SS18L1-205ENST00000492466 MMP3P08254 477 aa16.92■□□□□ 0.3
SS18L1-205ENST00000492466 IQCF3P0C7M6 154 aa16.92■□□□□ 0.3
SS18L1-205ENST00000492466 METAP2P50579 478 aaKnown RBP eCLIP16.92■□□□□ 0.3
SS18L1-205ENST00000492466 HSD17B4P51659 736 aa16.92■□□□□ 0.3
SS18L1-205ENST00000492466 MRPL12P52815 198 aaKnown RBP16.92■□□□□ 0.3
SS18L1-205ENST00000492466 APOBRQ0VD83 1088 aa16.92■□□□□ 0.3
SS18L1-205ENST00000492466 GPNMBQ14956 572 aa16.92■□□□□ 0.3
SS18L1-205ENST00000492466 FAM47CQ5HY64 1035 aa16.92■□□□□ 0.3
SS18L1-205ENST00000492466 SEPT14Q6ZU15 432 aa16.92■□□□□ 0.3
SS18L1-205ENST00000492466 CCDC82Q8N4S0 544 aa16.92■□□□□ 0.3
SS18L1-205ENST00000492466 RIOX1Q9H6W3 641 aa16.92■□□□□ 0.3
SS18L1-205ENST00000492466 DDX41Q9UJV9 622 aaKnown RBP16.92■□□□□ 0.3
SS18L1-205ENST00000492466 RGS20O76081 388 aa16.91■□□□□ 0.3
SS18L1-205ENST00000492466 STXBP2Q15833 593 aa16.91■□□□□ 0.3
SS18L1-205ENST00000492466 RUFY3Q7L099 469 aa16.91■□□□□ 0.3
SS18L1-205ENST00000492466 DEFB128Q7Z7B8 93 aa16.91■□□□□ 0.3
SS18L1-205ENST00000492466 SESTD1Q86VW0 696 aa16.91■□□□□ 0.3
SS18L1-205ENST00000492466 CMTR1Q8N1G2 835 aaKnown RBP16.91■□□□□ 0.3
SS18L1-205ENST00000492466 FANCBQ8NB91 859 aa16.91■□□□□ 0.3
SS18L1-205ENST00000492466 GAS2L1Q99501 681 aaPredicted RBP16.91■□□□□ 0.3
SS18L1-205ENST00000492466 UPF3BQ9BZI7 483 aaKnown RBP16.91■□□□□ 0.3
SS18L1-205ENST00000492466 SLC28A3Q9HAS3 691 aa16.91■□□□□ 0.3
SS18L1-205ENST00000492466 PXMP2Q9NR77 195 aa16.91■□□□□ 0.3
SS18L1-205ENST00000492466 PCDHA11Q9Y5I1 949 aa16.91■□□□□ 0.3
SS18L1-205ENST00000492466 TRIP12Q14669 1992 aaPredicted RBP16.9■□□□□ 0.3
SS18L1-205ENST00000492466 EIF3JO75822 258 aaKnown RBP16.9■□□□□ 0.3
SS18L1-205ENST00000492466 GH1P01241 217 aa16.9■□□□□ 0.3
SS18L1-205ENST00000492466 NR3C2P08235 984 aa16.9■□□□□ 0.3
SS18L1-205ENST00000492466 ATP2A2P16615 1042 aaKnown RBP16.9■□□□□ 0.3
SS18L1-205ENST00000492466 EIF2AK2P19525 551 aaKnown RBP16.9■□□□□ 0.3
SS18L1-205ENST00000492466 GDF6Q6KF10 455 aaPredicted RBP16.9■□□□□ 0.3
SS18L1-205ENST00000492466 TMTC3Q6ZXV5 915 aa16.9■□□□□ 0.3
SS18L1-205ENST00000492466 EMID1Q96A84 441 aaPredicted RBP16.9■□□□□ 0.3
SS18L1-205ENST00000492466 BRPF3Q9ULD4 1205 aa16.9■□□□□ 0.3
SS18L1-205ENST00000492466 TANC1Q9C0D5 1861 aa16.9■□□□□ 0.3
SS18L1-205ENST00000492466 CCDC196A0A1B0GTZ2 297 aa16.89■□□□□ 0.29
SS18L1-205ENST00000492466 ZBBXA8MT70 800 aa16.89■□□□□ 0.29
SS18L1-205ENST00000492466 RBAK-RBAKDNI3L0D1 243 aa16.89■□□□□ 0.29
SS18L1-205ENST00000492466 CYTH3O43739 400 aa16.89■□□□□ 0.29
SS18L1-205ENST00000492466 RFC2P35250 354 aa16.89■□□□□ 0.29
SS18L1-205ENST00000492466 PTGISQ16647 500 aa16.89■□□□□ 0.29
SS18L1-205ENST00000492466 ARHGEF16Q5VV41 709 aa16.89■□□□□ 0.29
SS18L1-205ENST00000492466 HEATR3Q7Z4Q2 680 aa16.89■□□□□ 0.29
SS18L1-205ENST00000492466 SRBD1Q8N5C6 995 aaKnown RBP16.89■□□□□ 0.29
SS18L1-205ENST00000492466 DHX38Q92620 1227 aaKnown RBP16.89■□□□□ 0.29
SS18L1-205ENST00000492466 CUL5Q93034 780 aa16.89■□□□□ 0.29
SS18L1-205ENST00000492466 BDP1A6H8Y1 2624 aa16.88■□□□□ 0.29
SS18L1-205ENST00000492466 hCG_1642624A0A1W2PR95 340 aa16.88■□□□□ 0.29
SS18L1-205ENST00000492466 HOXD8P13378 290 aaPredicted RBP16.88■□□□□ 0.29
SS18L1-205ENST00000492466 VSIG10LQ86VR7 867 aa16.88■□□□□ 0.29
SS18L1-205ENST00000492466 PPM1EQ8WY54 764 aa16.88■□□□□ 0.29
SS18L1-205ENST00000492466 PDCD2LQ9BRP1 358 aa16.88■□□□□ 0.29
SS18L1-205ENST00000492466 TM6SF1Q9BZW5 370 aa16.88■□□□□ 0.29
SS18L1-205ENST00000492466 PDRG1Q9NUG6 133 aa16.88■□□□□ 0.29
SS18L1-205ENST00000492466 MAP3K20Q9NYL2 800 aaKnown RBP16.88■□□□□ 0.29
SS18L1-205ENST00000492466 CNTNAP5Q8WYK1 1306 aa16.88■□□□□ 0.29
SS18L1-205ENST00000492466 GCOM1H8Y6P7 765 aaPredicted RBP16.87■□□□□ 0.29
SS18L1-205ENST00000492466 HAS3O00219 553 aa16.87■□□□□ 0.29
SS18L1-205ENST00000492466 ARHGEF15O94989 841 aa16.87■□□□□ 0.29
SS18L1-205ENST00000492466 POLR2MP0CAP2 368 aa16.87■□□□□ 0.29
SS18L1-205ENST00000492466 SMARCA1P28370 1054 aa16.87■□□□□ 0.29
SS18L1-205ENST00000492466 HOXA13P31271 388 aaPredicted RBP16.87■□□□□ 0.29
SS18L1-205ENST00000492466 RCAN1P53805 252 aa16.87■□□□□ 0.29
SS18L1-205ENST00000492466 ANAPC15P60006 121 aa16.87■□□□□ 0.29
SS18L1-205ENST00000492466 AKAP17AQ02040 695 aaKnown RBP16.87■□□□□ 0.29
SS18L1-205ENST00000492466 SP2Q02086 613 aa16.87■□□□□ 0.29
SS18L1-205ENST00000492466 RBL2Q08999 1139 aa16.87■□□□□ 0.29
SS18L1-205ENST00000492466 BFSP2Q13515 415 aa16.87■□□□□ 0.29
SS18L1-205ENST00000492466 TJAP1Q5JTD0 557 aa16.87■□□□□ 0.29
SS18L1-205ENST00000492466 PPP2R2DQ66LE6 453 aa16.87■□□□□ 0.29
SS18L1-205ENST00000492466 RETREG2Q8NC44 543 aa16.87■□□□□ 0.29
SS18L1-205ENST00000492466 IL31RAQ8NI17 732 aa16.87■□□□□ 0.29
SS18L1-205ENST00000492466 UPF2Q9HAU5 1272 aaKnown RBP16.87■□□□□ 0.29
SS18L1-205ENST00000492466 ZSWIM6Q9HCJ5 1215 aa16.87■□□□□ 0.29
SS18L1-205ENST00000492466 GTF2IRD1Q9UHL9 959 aa16.87■□□□□ 0.29
SS18L1-205ENST00000492466 F2P00734 622 aa16.86■□□□□ 0.29
SS18L1-205ENST00000492466 CA3P07451 260 aa16.86■□□□□ 0.29
SS18L1-205ENST00000492466 IGFBP4P22692 258 aa16.86■□□□□ 0.29
SS18L1-205ENST00000492466 CHMP4BP1P59074 171 aa16.86■□□□□ 0.29
SS18L1-205ENST00000492466 LAMC2Q13753 1193 aa16.86■□□□□ 0.29
SS18L1-205ENST00000492466 HIC1Q14526 733 aa16.86■□□□□ 0.29
SS18L1-205ENST00000492466 CCDC85BQ15834 202 aaPredicted RBP16.86■□□□□ 0.29
SS18L1-205ENST00000492466 DGKDQ16760 1214 aa16.86■□□□□ 0.29
SS18L1-205ENST00000492466 MYSM1Q5VVJ2 828 aa16.86■□□□□ 0.29
SS18L1-205ENST00000492466 TRAF7Q6Q0C0 670 aa16.86■□□□□ 0.29
SS18L1-205ENST00000492466 FCHSD1Q86WN1 690 aa16.86■□□□□ 0.29
SS18L1-205ENST00000492466 PPTC7Q8NI37 304 aa16.86■□□□□ 0.29
SS18L1-205ENST00000492466 SMARCC2Q8TAQ2 1214 aa16.86■□□□□ 0.29
SS18L1-205ENST00000492466 CAGE1Q8TC20 777 aa16.86■□□□□ 0.29
SS18L1-205ENST00000492466 PHOSPHO2Q8TCD6 241 aa16.86■□□□□ 0.29
SS18L1-205ENST00000492466 AFAP1L1Q8TED9 768 aa16.86■□□□□ 0.29
SS18L1-205ENST00000492466 SYMPKQ92797 1274 aaKnown RBP16.86■□□□□ 0.29
SS18L1-205ENST00000492466 HDAC6Q9UBN7 1215 aa16.86■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms