RNA–Protein interactions for RNA: ENST00000491747.6

BRCA1-219, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5 BASIC

Gene BRCA1, Length 2,379 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-219ENST00000491747 PGM5Q15124 567 aa10.71□□□□□ -0.69
BRCA1-219ENST00000491747 UBE2SQ16763 222 aa10.71□□□□□ -0.69
BRCA1-219ENST00000491747 CCSAPQ6IQ19 270 aaPredicted RBP10.71□□□□□ -0.69
BRCA1-219ENST00000491747 ARRDC4Q8NCT1 418 aa10.71□□□□□ -0.69
BRCA1-219ENST00000491747 KLHDC9Q8NEP7 349 aa10.71□□□□□ -0.69
BRCA1-219ENST00000491747 PDCD2LQ9BRP1 358 aa10.71□□□□□ -0.69
BRCA1-219ENST00000491747 SENP6Q9GZR1 1112 aaPredicted RBP10.71□□□□□ -0.69
BRCA1-219ENST00000491747 MTMR6Q9Y217 621 aa10.71□□□□□ -0.69
BRCA1-219ENST00000491747 CCDC196A0A1B0GTZ2 297 aa10.7□□□□□ -0.7
BRCA1-219ENST00000491747 LARGE1O95461 756 aa10.7□□□□□ -0.7
BRCA1-219ENST00000491747 GJA9P57773 515 aa10.7□□□□□ -0.7
BRCA1-219ENST00000491747 DNM1Q05193 864 aaKnown RBP10.7□□□□□ -0.7
BRCA1-219ENST00000491747 TPRNQ4KMQ1 711 aa10.7□□□□□ -0.7
BRCA1-219ENST00000491747 IQSEC1Q6DN90 963 aa10.7□□□□□ -0.7
BRCA1-219ENST00000491747 CCDC83Q8IWF9 413 aa10.7□□□□□ -0.7
BRCA1-219ENST00000491747 COPS5Q92905 334 aa10.7□□□□□ -0.7
BRCA1-219ENST00000491747 IWS1Q96ST2 819 aa10.7□□□□□ -0.7
BRCA1-219ENST00000491747 WDR11Q9BZH6 1224 aa10.7□□□□□ -0.7
BRCA1-219ENST00000491747 UPF3AQ9H1J1 476 aaKnown RBP10.7□□□□□ -0.7
BRCA1-219ENST00000491747 PCDH10Q9P2E7 1040 aa10.7□□□□□ -0.7
BRCA1-219ENST00000491747 PIK3CDO00329 1044 aa10.7□□□□□ -0.7
BRCA1-219ENST00000491747 PRPF3O43395 683 aaKnown RBP10.7□□□□□ -0.7
BRCA1-219ENST00000491747 RGS20O76081 388 aa10.7□□□□□ -0.7
BRCA1-219ENST00000491747 IFNAR1P17181 557 aa10.7□□□□□ -0.7
BRCA1-219ENST00000491747 BEX3Q00994 111 aa10.7□□□□□ -0.7
BRCA1-219ENST00000491747 SCRN1Q12765 414 aa10.7□□□□□ -0.7
BRCA1-219ENST00000491747 PFKFB3Q16875 520 aaPredicted RBP10.7□□□□□ -0.7
BRCA1-219ENST00000491747 LRRC26Q2I0M4 334 aa10.7□□□□□ -0.7
BRCA1-219ENST00000491747 FERMT2Q96AC1 680 aa10.7□□□□□ -0.7
BRCA1-219ENST00000491747 PSTPIP2Q9H939 334 aa10.7□□□□□ -0.7
BRCA1-219ENST00000491747 FRMPD4Q14CM0 1322 aa10.7□□□□□ -0.7
BRCA1-219ENST00000491747 DYNC1LI2O43237 492 aaPredicted RBP10.69□□□□□ -0.7
BRCA1-219ENST00000491747 C6orf222P0C671 652 aaPredicted RBP10.69□□□□□ -0.7
BRCA1-219ENST00000491747 MYCLP12524 364 aaPredicted RBP10.69□□□□□ -0.7
BRCA1-219ENST00000491747 NKX3-2P78367 333 aa10.69□□□□□ -0.7
BRCA1-219ENST00000491747 STXBP2Q15833 593 aa10.69□□□□□ -0.7
BRCA1-219ENST00000491747 KCNA10Q16322 511 aa10.69□□□□□ -0.7
BRCA1-219ENST00000491747 DUSP28Q4G0W2 176 aa10.69□□□□□ -0.7
BRCA1-219ENST00000491747 SEPT14Q6ZU15 432 aa10.69□□□□□ -0.7
BRCA1-219ENST00000491747 TLK2Q86UE8 772 aa10.69□□□□□ -0.7
BRCA1-219ENST00000491747 VSIG10LQ86VR7 867 aa10.69□□□□□ -0.7
BRCA1-219ENST00000491747 SMARCC2Q8TAQ2 1214 aa10.69□□□□□ -0.7
BRCA1-219ENST00000491747 KIAA1524Q8TCG1 905 aa10.69□□□□□ -0.7
BRCA1-219ENST00000491747 DPF3Q92784 378 aa10.69□□□□□ -0.7
BRCA1-219ENST00000491747 SLC26A6Q9BXS9 759 aa10.69□□□□□ -0.7
BRCA1-219ENST00000491747 BARHL2Q9NY43 387 aa10.69□□□□□ -0.7
BRCA1-219ENST00000491747 PHF24Q9UPV7 400 aa10.69□□□□□ -0.7
BRCA1-219ENST00000491747 PDE4DIPQ5VU43 2346 aa10.69□□□□□ -0.7
BRCA1-219ENST00000491747 VPS37CA5D8V6 355 aaPredicted RBP10.69□□□□□ -0.7
BRCA1-219ENST00000491747 KBTBD13C9JR72 458 aa10.69□□□□□ -0.7
BRCA1-219ENST00000491747 SCG2P13521 617 aa10.69□□□□□ -0.7
BRCA1-219ENST00000491747 PDCP20941 246 aa10.69□□□□□ -0.7
BRCA1-219ENST00000491747 ATN1P54259 1190 aaPredicted RBP10.69□□□□□ -0.7
BRCA1-219ENST00000491747 NAPAP54920 295 aa10.69□□□□□ -0.7
BRCA1-219ENST00000491747 KRT85P78386 507 aa10.69□□□□□ -0.7
BRCA1-219ENST00000491747 MRPS9P82933 396 aaKnown RBP10.69□□□□□ -0.7
BRCA1-219ENST00000491747 CCDC62Q6P9F0 684 aa10.69□□□□□ -0.7
BRCA1-219ENST00000491747 RNF180Q86T96 592 aa10.69□□□□□ -0.7
BRCA1-219ENST00000491747 MPHOSPH6Q99547 160 aaKnown RBP10.69□□□□□ -0.7
BRCA1-219ENST00000491747 ARID3AQ99856 593 aa10.69□□□□□ -0.7
BRCA1-219ENST00000491747 B4DLN1 442 aa10.68□□□□□ -0.7
BRCA1-219ENST00000491747 PFKFB2O60825 505 aa10.68□□□□□ -0.7
BRCA1-219ENST00000491747 EIF3JO75822 258 aaKnown RBP10.68□□□□□ -0.7
BRCA1-219ENST00000491747 CST5P28325 142 aaPredicted RBP10.68□□□□□ -0.7
BRCA1-219ENST00000491747 MRPL12P52815 198 aaKnown RBP10.68□□□□□ -0.7
BRCA1-219ENST00000491747 ME3Q16798 604 aa10.68□□□□□ -0.7
BRCA1-219ENST00000491747 LY6KQ17RY6 165 aa10.68□□□□□ -0.7
BRCA1-219ENST00000491747 HTATIP2Q9BUP3 242 aa10.68□□□□□ -0.7
BRCA1-219ENST00000491747 RNF26Q9BY78 433 aaPredicted RBP10.68□□□□□ -0.7
BRCA1-219ENST00000491747 TMEM260Q9NX78 707 aa10.68□□□□□ -0.7
BRCA1-219ENST00000491747 A0A1W2PQ45 241 aaPredicted RBP10.68□□□□□ -0.7
BRCA1-219ENST00000491747 A0A1W2PQY0 241 aa10.68□□□□□ -0.7
BRCA1-219ENST00000491747 SMCO2A6NFE2 343 aa10.68□□□□□ -0.7
BRCA1-219ENST00000491747 ELP1O95163 1332 aa10.68□□□□□ -0.7
BRCA1-219ENST00000491747 CTDNEP1O95476 244 aa10.68□□□□□ -0.7
BRCA1-219ENST00000491747 ASGR1P07306 291 aa10.68□□□□□ -0.7
BRCA1-219ENST00000491747 TXNP10599 105 aaKnown RBP10.68□□□□□ -0.7
BRCA1-219ENST00000491747 ACLYP53396 1101 aa10.68□□□□□ -0.7
BRCA1-219ENST00000491747 GNASQ5JWF2 1037 aa10.68□□□□□ -0.7
BRCA1-219ENST00000491747 SLC39A5Q6ZMH5 540 aa10.68□□□□□ -0.7
BRCA1-219ENST00000491747 NECAB1Q8N987 351 aa10.68□□□□□ -0.7
BRCA1-219ENST00000491747 FAM200AQ8TCP9 573 aa10.68□□□□□ -0.7
BRCA1-219ENST00000491747 SCFD2Q8WU76 684 aa10.68□□□□□ -0.7
BRCA1-219ENST00000491747 CUL5Q93034 780 aa10.68□□□□□ -0.7
BRCA1-219ENST00000491747 PGBD1Q96JS3 809 aa10.68□□□□□ -0.7
BRCA1-219ENST00000491747 TSEN34Q9BSV6 310 aaKnown RBP10.68□□□□□ -0.7
BRCA1-219ENST00000491747 RIC8AQ9NPQ8 531 aa10.68□□□□□ -0.7
BRCA1-219ENST00000491747 Q9Y3F1 56 aa10.68□□□□□ -0.7
BRCA1-219ENST00000491747 CLK2P49760 499 aaKnown RBP10.67□□□□□ -0.7
BRCA1-219ENST00000491747 SP2Q02086 613 aa10.67□□□□□ -0.7
BRCA1-219ENST00000491747 ST3GAL1Q11201 340 aa10.67□□□□□ -0.7
BRCA1-219ENST00000491747 PPP1R18Q6NYC8 613 aa10.67□□□□□ -0.7
BRCA1-219ENST00000491747 C17orf53Q8N3J3 647 aaPredicted RBP10.67□□□□□ -0.7
BRCA1-219ENST00000491747 AIFM3Q96NN9 605 aa10.67□□□□□ -0.7
BRCA1-219ENST00000491747 NUP62CLQ9H1M0 184 aa10.67□□□□□ -0.7
BRCA1-219ENST00000491747 BCAS3Q9H6U6 928 aa10.67□□□□□ -0.7
BRCA1-219ENST00000491747 RTEL1Q9NZ71 1219 aa10.67□□□□□ -0.7
BRCA1-219ENST00000491747 DDX41Q9UJV9 622 aaKnown RBP10.67□□□□□ -0.7
BRCA1-219ENST00000491747 PCDHA6Q9UN73 950 aa10.67□□□□□ -0.7
BRCA1-219ENST00000491747 PCDHA8Q9Y5H6 950 aa10.67□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms