RNA–Protein interactions for RNA: ENST00000491592.1

RTN4-215, Transcript of reticulon 4, humanhuman

TSL 2

Gene RTN4, Length 860 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-215ENST00000491592 CORO7P57737 925 aa5.89□□□□□ -1.47
RTN4-215ENST00000491592 ZRSR2Q15696 482 aaKnown RBP5.89□□□□□ -1.47
RTN4-215ENST00000491592 STYK1Q6J9G0 422 aa5.89□□□□□ -1.47
RTN4-215ENST00000491592 MAMDC2Q7Z304 686 aaPredicted RBP5.89□□□□□ -1.47
RTN4-215ENST00000491592 RPUSD2Q8IZ73 545 aaKnown RBP5.89□□□□□ -1.47
RTN4-215ENST00000491592 NUP43Q8NFH3 380 aa5.89□□□□□ -1.47
RTN4-215ENST00000491592 DCAF4Q8WV16 495 aa5.89□□□□□ -1.47
RTN4-215ENST00000491592 C8orf48Q96LL4 319 aa5.89□□□□□ -1.47
RTN4-215ENST00000491592 SLKQ9H2G2 1235 aaPredicted RBP5.89□□□□□ -1.47
RTN4-215ENST00000491592 ARAP1Q96P48 1450 aa5.89□□□□□ -1.47
RTN4-215ENST00000491592 PRXQ9BXM0 1461 aa5.89□□□□□ -1.47
RTN4-215ENST00000491592 MAPKBP1O60336 1514 aa5.89□□□□□ -1.47
RTN4-215ENST00000491592 C7orf72A4D263 438 aa5.88□□□□□ -1.47
RTN4-215ENST00000491592 MYO1BO43795 1136 aa5.88□□□□□ -1.47
RTN4-215ENST00000491592 NPHS1O60500 1241 aa5.88□□□□□ -1.47
RTN4-215ENST00000491592 PSPNO60542 156 aa5.88□□□□□ -1.47
RTN4-215ENST00000491592 LCP1P13796 627 aa5.88□□□□□ -1.47
RTN4-215ENST00000491592 MAN1A1P33908 653 aa5.88□□□□□ -1.47
RTN4-215ENST00000491592 AFMP43652 599 aa5.88□□□□□ -1.47
RTN4-215ENST00000491592 GABREP78334 506 aa5.88□□□□□ -1.47
RTN4-215ENST00000491592 RBM10P98175 930 aaKnown RBP5.88□□□□□ -1.47
RTN4-215ENST00000491592 POU5F1BQ06416 359 aa5.88□□□□□ -1.47
RTN4-215ENST00000491592 HDAC1Q13547 482 aaPredicted RBP5.88□□□□□ -1.47
RTN4-215ENST00000491592 UBE4AQ14139 1066 aa5.88□□□□□ -1.47
RTN4-215ENST00000491592 TKFCQ3LXA3 575 aa5.88□□□□□ -1.47
RTN4-215ENST00000491592 RSPO2Q6UXX9 243 aaPredicted RBP5.88□□□□□ -1.47
RTN4-215ENST00000491592 NLRX1Q86UT6 975 aa5.88□□□□□ -1.47
RTN4-215ENST00000491592 SYNPOQ8N3V7 929 aa5.88□□□□□ -1.47
RTN4-215ENST00000491592 ABHD4Q8TB40 342 aa5.88□□□□□ -1.47
RTN4-215ENST00000491592 SECISBP2LQ93073 1101 aaKnown RBP5.88□□□□□ -1.47
RTN4-215ENST00000491592 KIRREL1Q96J84 757 aa5.88□□□□□ -1.47
RTN4-215ENST00000491592 CEP89Q96ST8 783 aa5.88□□□□□ -1.47
RTN4-215ENST00000491592 MRPL4Q9BYD3 311 aaKnown RBP5.88□□□□□ -1.47
RTN4-215ENST00000491592 RNF32Q9H0A6 362 aa5.88□□□□□ -1.47
RTN4-215ENST00000491592 GPR27Q9NS67 375 aa5.88□□□□□ -1.47
RTN4-215ENST00000491592 FBXL7Q9UJT9 491 aa5.88□□□□□ -1.47
RTN4-215ENST00000491592 TRAF6Q9Y4K3 522 aa5.88□□□□□ -1.47
RTN4-215ENST00000491592 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP5.88□□□□□ -1.47
RTN4-215ENST00000491592 RAB3GAP2Q9H2M9 1393 aa5.88□□□□□ -1.47
RTN4-215ENST00000491592 CARMIL2Q6F5E8 1435 aa5.88□□□□□ -1.47
RTN4-215ENST00000491592 TOP2BQ02880 1626 aa5.88□□□□□ -1.47
RTN4-215ENST00000491592 A0A1W2PQ27 194 aa5.87□□□□□ -1.47
RTN4-215ENST00000491592 A0A1W2PQ64 194 aa5.87□□□□□ -1.47
RTN4-215ENST00000491592 A0A1W2PQC6 194 aa5.87□□□□□ -1.47
RTN4-215ENST00000491592 A0A1W2PQD8 194 aa5.87□□□□□ -1.47
RTN4-215ENST00000491592 PDGFRBP09619 1106 aa5.87□□□□□ -1.47
RTN4-215ENST00000491592 PRKCAP17252 672 aa5.87□□□□□ -1.47
RTN4-215ENST00000491592 RPL11P62913 178 aaKnown RBP5.87□□□□□ -1.47
RTN4-215ENST00000491592 FAM193AP78312 1265 aa5.87□□□□□ -1.47
RTN4-215ENST00000491592 LMOD3Q0VAK6 560 aa5.87□□□□□ -1.47
RTN4-215ENST00000491592 KIR3DS1Q14943 382 aa5.87□□□□□ -1.47
RTN4-215ENST00000491592 TCEA2Q15560 299 aa5.87□□□□□ -1.47
RTN4-215ENST00000491592 FBLN7Q53RD9 439 aa5.87□□□□□ -1.47
RTN4-215ENST00000491592 TRIM61Q5EBN2 209 aa5.87□□□□□ -1.47
RTN4-215ENST00000491592 FYB2Q5VWT5 728 aa5.87□□□□□ -1.47
RTN4-215ENST00000491592 KCNT2Q6UVM3 1135 aa5.87□□□□□ -1.47
RTN4-215ENST00000491592 C16orf86Q6ZW13 317 aa5.87□□□□□ -1.47
RTN4-215ENST00000491592 NLRP10Q86W26 655 aa5.87□□□□□ -1.47
RTN4-215ENST00000491592 RCBTB1Q8NDN9 531 aa5.87□□□□□ -1.47
RTN4-215ENST00000491592 FAM168AQ92567 244 aa5.87□□□□□ -1.47
RTN4-215ENST00000491592 PTPRN2Q92932 1015 aa5.87□□□□□ -1.47
RTN4-215ENST00000491592 SLC38A3Q99624 504 aa5.87□□□□□ -1.47
RTN4-215ENST00000491592 FEZ1Q99689 392 aa5.87□□□□□ -1.47
RTN4-215ENST00000491592 ZFYVE21Q9BQ24 234 aa5.87□□□□□ -1.47
RTN4-215ENST00000491592 SLC52A2Q9HAB3 445 aa5.87□□□□□ -1.47
RTN4-215ENST00000491592 GULP1Q9UBP9 304 aa5.87□□□□□ -1.47
RTN4-215ENST00000491592 NDOR1Q9UHB4 597 aa5.87□□□□□ -1.47
RTN4-215ENST00000491592 ACSL6Q9UKU0 697 aa5.87□□□□□ -1.47
RTN4-215ENST00000491592 RWDD3Q9Y3V2 267 aa5.87□□□□□ -1.47
RTN4-215ENST00000491592 CD2APQ9Y5K6 639 aa5.87□□□□□ -1.47
RTN4-215ENST00000491592 SCINQ9Y6U3 715 aa5.87□□□□□ -1.47
RTN4-215ENST00000491592 ASXL2Q76L83 1435 aa5.87□□□□□ -1.47
RTN4-215ENST00000491592 WDR97A6NE52 1622 aa5.86□□□□□ -1.47
RTN4-215ENST00000491592 BIVM-ERCC5R4GMW8 1640 aa5.86□□□□□ -1.47
RTN4-215ENST00000491592 AQP7O14520 342 aa5.86□□□□□ -1.47
RTN4-215ENST00000491592 PLD2O14939 933 aa5.86□□□□□ -1.47
RTN4-215ENST00000491592 KIF3BO15066 747 aa5.86□□□□□ -1.47
RTN4-215ENST00000491592 EPB41L2O43491 1005 aaKnown RBP5.86□□□□□ -1.47
RTN4-215ENST00000491592 MSCO60682 206 aa5.86□□□□□ -1.47
RTN4-215ENST00000491592 MSL3P1P0C860 447 aa5.86□□□□□ -1.47
RTN4-215ENST00000491592 CD53P19397 219 aa5.86□□□□□ -1.47
RTN4-215ENST00000491592 TACR1P25103 407 aa5.86□□□□□ -1.47
RTN4-215ENST00000491592 GALK1P51570 392 aa5.86□□□□□ -1.47
RTN4-215ENST00000491592 GPR85P60893 370 aa5.86□□□□□ -1.47
RTN4-215ENST00000491592 POU5F1Q01860 360 aaKnown RBP5.86□□□□□ -1.47
RTN4-215ENST00000491592 MVKQ03426 396 aa5.86□□□□□ -1.47
RTN4-215ENST00000491592 CBX2Q14781 532 aaPredicted RBP5.86□□□□□ -1.47
RTN4-215ENST00000491592 ZNF124Q15973 351 aa5.86□□□□□ -1.47
RTN4-215ENST00000491592 PLEKHG4Q58EX7 1191 aa5.86□□□□□ -1.47
RTN4-215ENST00000491592 ODR4Q5SWX8 454 aa5.86□□□□□ -1.47
RTN4-215ENST00000491592 MTDHQ86UE4 582 aaKnown RBP5.86□□□□□ -1.47
RTN4-215ENST00000491592 ZSWIM9Q86XI8 627 aa5.86□□□□□ -1.47
RTN4-215ENST00000491592 ABCF1Q8NE71 845 aaKnown RBP eCLIP5.86□□□□□ -1.47
RTN4-215ENST00000491592 GSTCDQ8NEC7 633 aa5.86□□□□□ -1.47
RTN4-215ENST00000491592 PUM2Q8TB72 1066 aaKnown RBP eCLIP5.86□□□□□ -1.473e-47■□□□□ 9.6
RTN4-215ENST00000491592 STAG1Q8WVM7 1258 aa5.86□□□□□ -1.47
RTN4-215ENST00000491592 SHISA4Q96DD7 197 aa5.86□□□□□ -1.47
RTN4-215ENST00000491592 BTG4Q9NY30 223 aa5.86□□□□□ -1.47
RTN4-215ENST00000491592 MARCH2Q9P0N8 246 aa5.86□□□□□ -1.47
RTN4-215ENST00000491592 FBLN5Q9UBX5 448 aa5.86□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms