RNA–Protein interactions for RNA: ENST00000491541.1

SREBF2-208, Transcript of sterol regulatory element binding transcription factor 2, humanhuman

TSL 1 (best)

Gene SREBF2, Length 4,043 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF2-208ENST00000491541 USHBP1Q8N6Y0 703 aa11.37□□□□□ -0.59
SREBF2-208ENST00000491541 ATL2Q8NHH9 583 aa11.37□□□□□ -0.59
SREBF2-208ENST00000491541 BCAS4Q8TDM0 211 aa11.37□□□□□ -0.59
SREBF2-208ENST00000491541 ARL8AQ96BM9 186 aa11.37□□□□□ -0.59
SREBF2-208ENST00000491541 PIH1D3Q9NQM4 214 aaKnown RBP11.37□□□□□ -0.59
SREBF2-208ENST00000491541 FRMPD4Q14CM0 1322 aa11.37□□□□□ -0.59
SREBF2-208ENST00000491541 ECM2O94769 699 aaPredicted RBP11.37□□□□□ -0.59
SREBF2-208ENST00000491541 SSBP05455 408 aaKnown RBP eCLIP11.37□□□□□ -0.59
SREBF2-208ENST00000491541 PRCPP42785 496 aa11.37□□□□□ -0.59
SREBF2-208ENST00000491541 FXR2P51116 673 aaKnown RBP eCLIP11.37□□□□□ -0.597e-7■■□□□ 12.9
SREBF2-208ENST00000491541 HAND2P61296 217 aa11.37□□□□□ -0.59
SREBF2-208ENST00000491541 ZNF827Q17R98 1081 aa11.37□□□□□ -0.59
SREBF2-208ENST00000491541 IFNL3Q8IZI9 196 aa11.37□□□□□ -0.59
SREBF2-208ENST00000491541 TEX9Q8N6V9 391 aa11.37□□□□□ -0.59
SREBF2-208ENST00000491541 DMGDHQ9UI17 866 aaKnown RBP11.37□□□□□ -0.59
SREBF2-208ENST00000491541 COL2A1P02458 1487 aaPredicted RBP11.37□□□□□ -0.59
SREBF2-208ENST00000491541 ERICH2A1L162 156 aa11.37□□□□□ -0.59
SREBF2-208ENST00000491541 GTPBP10A4D1E9 387 aaKnown RBP11.37□□□□□ -0.59
SREBF2-208ENST00000491541 CCDC188H7C350 402 aa11.37□□□□□ -0.59
SREBF2-208ENST00000491541 EDIL3O43854 480 aa11.37□□□□□ -0.59
SREBF2-208ENST00000491541 PDE6AP16499 860 aa11.37□□□□□ -0.59
SREBF2-208ENST00000491541 ZNF131P52739 623 aa11.37□□□□□ -0.59
SREBF2-208ENST00000491541 ATP2B2Q01814 1243 aa11.37□□□□□ -0.59
SREBF2-208ENST00000491541 LRRC24Q50LG9 513 aa11.37□□□□□ -0.59
SREBF2-208ENST00000491541 LMBR1LQ6UX01 489 aa11.37□□□□□ -0.59
SREBF2-208ENST00000491541 ZNF34Q8IZ26 560 aa11.37□□□□□ -0.59
SREBF2-208ENST00000491541 PBKQ96KB5 322 aa11.37□□□□□ -0.59
SREBF2-208ENST00000491541 PHACTR1Q9C0D0 580 aa11.37□□□□□ -0.59
SREBF2-208ENST00000491541 ZNF236Q9UL36 1845 aa11.36□□□□□ -0.59
SREBF2-208ENST00000491541 ENO4A6NNW6 628 aa11.36□□□□□ -0.59
SREBF2-208ENST00000491541 BRD2P25440 801 aaKnown RBP11.36□□□□□ -0.59
SREBF2-208ENST00000491541 CDR1P51861 262 aa11.36□□□□□ -0.59
SREBF2-208ENST00000491541 STX17P56962 302 aa11.36□□□□□ -0.59
SREBF2-208ENST00000491541 RPL26P61254 145 aaKnown RBP11.36□□□□□ -0.59
SREBF2-208ENST00000491541 ELF3P78545 371 aaPredicted RBP11.36□□□□□ -0.59
SREBF2-208ENST00000491541 ADCY2Q08462 1091 aa11.36□□□□□ -0.59
SREBF2-208ENST00000491541 CCDC40Q4G0X9 1142 aa11.36□□□□□ -0.59
SREBF2-208ENST00000491541 PDXDC1Q6P996 788 aa11.36□□□□□ -0.59
SREBF2-208ENST00000491541 FAM114A1Q8IWE2 563 aa11.36□□□□□ -0.59
SREBF2-208ENST00000491541 PARP9Q8IXQ6 854 aa11.36□□□□□ -0.59
SREBF2-208ENST00000491541 USP38Q8NB14 1042 aa11.36□□□□□ -0.59
SREBF2-208ENST00000491541 HES6Q96HZ4 224 aa11.36□□□□□ -0.59
SREBF2-208ENST00000491541 AIFM3Q96NN9 605 aa11.36□□□□□ -0.59
SREBF2-208ENST00000491541 GANQ9H2C0 597 aa11.36□□□□□ -0.59
SREBF2-208ENST00000491541 JADE2Q9NQC1 790 aa11.36□□□□□ -0.59
SREBF2-208ENST00000491541 KRT2P35908 639 aa11.36□□□□□ -0.59
SREBF2-208ENST00000491541 ZNF844Q08AG5 666 aa11.36□□□□□ -0.59
SREBF2-208ENST00000491541 BLMHQ13867 455 aa11.36□□□□□ -0.59
SREBF2-208ENST00000491541 ZKSCAN8Q15776 578 aaPredicted RBP11.36□□□□□ -0.59
SREBF2-208ENST00000491541 ARFGAP2Q8N6H7 521 aa11.36□□□□□ -0.59
SREBF2-208ENST00000491541 OTUD6BQ8N6M0 293 aa11.36□□□□□ -0.59
SREBF2-208ENST00000491541 NUTM2BA6NNL0 878 aaPredicted RBP11.36□□□□□ -0.59
SREBF2-208ENST00000491541 NUTM2EB1AL46 878 aaPredicted RBP11.36□□□□□ -0.59
SREBF2-208ENST00000491541 BTBD18B2RXH4 712 aa11.36□□□□□ -0.59
SREBF2-208ENST00000491541 NPTXRO95502 500 aa11.36□□□□□ -0.59
SREBF2-208ENST00000491541 VIMP08670 466 aaKnown RBP11.36□□□□□ -0.59
SREBF2-208ENST00000491541 NF2P35240 595 aa11.36□□□□□ -0.59
SREBF2-208ENST00000491541 USP49Q70CQ1 688 aa11.36□□□□□ -0.59
SREBF2-208ENST00000491541 ZNF483Q8TF39 744 aaPredicted RBP11.36□□□□□ -0.59
SREBF2-208ENST00000491541 IRGQQ8WZA9 623 aa11.36□□□□□ -0.59
SREBF2-208ENST00000491541 MKL1Q969V6 931 aa11.36□□□□□ -0.59
SREBF2-208ENST00000491541 MTMR9Q96QG7 549 aa11.36□□□□□ -0.59
SREBF2-208ENST00000491541 LRRC1Q9BTT6 524 aa11.36□□□□□ -0.59
SREBF2-208ENST00000491541 TAF1DQ9H5J8 278 aaPredicted RBP11.36□□□□□ -0.59
SREBF2-208ENST00000491541 ANKIB1Q9P2G1 1089 aa11.36□□□□□ -0.59
SREBF2-208ENST00000491541 GUCA1BQ9UMX6 200 aa11.36□□□□□ -0.59
SREBF2-208ENST00000491541 BICDL2A1A5D9 508 aa11.35□□□□□ -0.59
SREBF2-208ENST00000491541 AHCYL1O43865 530 aa11.35□□□□□ -0.59
SREBF2-208ENST00000491541 PAK2Q13177 524 aa11.35□□□□□ -0.59
SREBF2-208ENST00000491541 SDCCAG8Q86SQ7 713 aaPredicted RBP11.35□□□□□ -0.59
SREBF2-208ENST00000491541 IFT20Q8IY31 132 aa11.35□□□□□ -0.59
SREBF2-208ENST00000491541 C7orf43Q8WVR3 580 aa11.35□□□□□ -0.59
SREBF2-208ENST00000491541 SLF1Q9BQI6 1058 aa11.35□□□□□ -0.59
SREBF2-208ENST00000491541 SALL4Q9UJQ4 1053 aa11.35□□□□□ -0.59
SREBF2-208ENST00000491541 PCDHA13Q9Y5I0 950 aa11.35□□□□□ -0.59
SREBF2-208ENST00000491541 ACTL7BQ9Y614 415 aa11.35□□□□□ -0.59
SREBF2-208ENST00000491541 TRIM75PA6NK02 468 aa11.35□□□□□ -0.59
SREBF2-208ENST00000491541 GBP1P32455 592 aa11.35□□□□□ -0.59
SREBF2-208ENST00000491541 MTMR3Q13615 1198 aa11.35□□□□□ -0.59
SREBF2-208ENST00000491541 PPP2R5EQ16537 467 aa11.35□□□□□ -0.59
SREBF2-208ENST00000491541 CCDC70Q6NSX1 233 aa11.35□□□□□ -0.59
SREBF2-208ENST00000491541 GUF1Q8N442 669 aaKnown RBP11.35□□□□□ -0.59
SREBF2-208ENST00000491541 FAM136AQ96C01 138 aa11.35□□□□□ -0.59
SREBF2-208ENST00000491541 CEP63Q96MT8 703 aa11.35□□□□□ -0.59
SREBF2-208ENST00000491541 DDX43Q9NXZ2 648 aaKnown RBP11.35□□□□□ -0.59
SREBF2-208ENST00000491541 A0A0G2JMZ2 1700 aa11.35□□□□□ -0.59
SREBF2-208ENST00000491541 LRRC37A2A6NM11 1700 aa11.35□□□□□ -0.59
SREBF2-208ENST00000491541 PDE8BO95263 885 aa11.35□□□□□ -0.59
SREBF2-208ENST00000491541 MATR3P43243 847 aaKnown RBP eCLIP11.35□□□□□ -0.592e-8■■■□□ 17.4
SREBF2-208ENST00000491541 PMS1P54277 932 aaKnown RBP11.35□□□□□ -0.59
SREBF2-208ENST00000491541 C15orf52Q6ZUT6 534 aaKnown RBP11.35□□□□□ -0.59
SREBF2-208ENST00000491541 SESTD1Q86VW0 696 aa11.35□□□□□ -0.59
SREBF2-208ENST00000491541 TBC1D16Q8TBP0 767 aa11.35□□□□□ -0.59
SREBF2-208ENST00000491541 RRP36Q96EU6 259 aaKnown RBP11.35□□□□□ -0.59
SREBF2-208ENST00000491541 CEP72Q9P209 647 aa11.35□□□□□ -0.59
SREBF2-208ENST00000491541 LEMD3Q9Y2U8 911 aa11.35□□□□□ -0.59
SREBF2-208ENST00000491541 UBR3Q6ZT12 1888 aa11.35□□□□□ -0.59
SREBF2-208ENST00000491541 NDUFAB1O14561 156 aa11.34□□□□□ -0.59
SREBF2-208ENST00000491541 ATP2C2O75185 946 aa11.34□□□□□ -0.59
SREBF2-208ENST00000491541 SCTRP47872 440 aa11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms