RNA–Protein interactions for RNA: ENST00000491502.1

NUP188-208, Transcript of nucleoporin 188, humanhuman

TSL 3

Gene NUP188, Length 534 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP188-208ENST00000491502 CLEC4DQ8WXI8 215 aa15.31■□□□□ 0.04
NUP188-208ENST00000491502 MPHOSPH6Q99547 160 aaKnown RBP15.31■□□□□ 0.04
NUP188-208ENST00000491502 SENP6Q9GZR1 1112 aaPredicted RBP15.31■□□□□ 0.04
NUP188-208ENST00000491502 MYH6P13533 1939 aa15.31■□□□□ 0.04
NUP188-208ENST00000491502 M0R2N6 131 aa15.3■□□□□ 0.04
NUP188-208ENST00000491502 LAD1O00515 517 aa15.3■□□□□ 0.04
NUP188-208ENST00000491502 NFIBO00712 420 aa15.3■□□□□ 0.04
NUP188-208ENST00000491502 CUTAO60888 179 aa15.3■□□□□ 0.04
NUP188-208ENST00000491502 DUSP11O75319 330 aaKnown RBP15.3■□□□□ 0.04
NUP188-208ENST00000491502 AP3B2Q13367 1082 aa15.3■□□□□ 0.04
NUP188-208ENST00000491502 FRMPD3Q5JV73 1810 aa15.3■□□□□ 0.04
NUP188-208ENST00000491502 TYW1BQ6NUM6 668 aa15.3■□□□□ 0.04
NUP188-208ENST00000491502 SAMD3Q8N6K7 520 aa15.3■□□□□ 0.04
NUP188-208ENST00000491502 KRI1Q8N9T8 703 aaKnown RBP15.3■□□□□ 0.04
NUP188-208ENST00000491502 MORC4Q8TE76 937 aa15.3■□□□□ 0.04
NUP188-208ENST00000491502 FERMT2Q96AC1 680 aa15.3■□□□□ 0.04
NUP188-208ENST00000491502 EHMT1Q9H9B1 1298 aa15.3■□□□□ 0.04
NUP188-208ENST00000491502 SPC25Q9HBM1 224 aa15.3■□□□□ 0.04
NUP188-208ENST00000491502 DDX19AQ9NUU7 478 aaKnown RBP15.3■□□□□ 0.04
NUP188-208ENST00000491502 GADD45BO75293 160 aaPredicted RBP15.29■□□□□ 0.04
NUP188-208ENST00000491502 MYCNP04198 464 aaPredicted RBP15.29■□□□□ 0.04
NUP188-208ENST00000491502 ATP2B1P20020 1258 aa15.29■□□□□ 0.04
NUP188-208ENST00000491502 CCDC144BQ3MJ40 725 aa15.29■□□□□ 0.04
NUP188-208ENST00000491502 USH1GQ495M9 461 aa15.29■□□□□ 0.04
NUP188-208ENST00000491502 DNERQ8NFT8 737 aa15.29■□□□□ 0.04
NUP188-208ENST00000491502 GPT2Q8TD30 523 aa15.29■□□□□ 0.04
NUP188-208ENST00000491502 MRPS27Q92552 414 aaKnown RBP15.29■□□□□ 0.04
NUP188-208ENST00000491502 TSEN34Q9BSV6 310 aaKnown RBP15.29■□□□□ 0.04
NUP188-208ENST00000491502 PCDHA7Q9UN72 937 aa15.29■□□□□ 0.04
NUP188-208ENST00000491502 TOB1P50616 345 aaPredicted RBP15.28■□□□□ 0.04
NUP188-208ENST00000491502 ALDH5A1P51649 535 aaPredicted RBP15.28■□□□□ 0.04
NUP188-208ENST00000491502 RPS6P62753 249 aaKnown RBP15.28■□□□□ 0.04
NUP188-208ENST00000491502 PTPAQ15257 358 aa15.28■□□□□ 0.04
NUP188-208ENST00000491502 CCDC183Q5T5S1 534 aa15.28■□□□□ 0.04
NUP188-208ENST00000491502 ARL6IP4Q66PJ3 421 aaKnown RBP15.28■□□□□ 0.04
NUP188-208ENST00000491502 IQSEC1Q6DN90 963 aa15.28■□□□□ 0.04
NUP188-208ENST00000491502 CAVIN1Q6NZI2 390 aaKnown RBP15.28■□□□□ 0.04
NUP188-208ENST00000491502 NEK8Q86SG6 692 aa15.28■□□□□ 0.04
NUP188-208ENST00000491502 ZNF579Q8NAF0 562 aaKnown RBP15.28■□□□□ 0.04
NUP188-208ENST00000491502 CCDC34Q96HJ3 373 aa15.28■□□□□ 0.04
NUP188-208ENST00000491502 KATNBL1Q9H079 304 aa15.28■□□□□ 0.04
NUP188-208ENST00000491502 VTA1Q9NP79 307 aa15.28■□□□□ 0.04
NUP188-208ENST00000491502 FAM13BQ9NYF5 915 aa15.28■□□□□ 0.04
NUP188-208ENST00000491502 MAP3K20Q9NYL2 800 aaKnown RBP15.28■□□□□ 0.04
NUP188-208ENST00000491502 PHF24Q9UPV7 400 aa15.28■□□□□ 0.04
NUP188-208ENST00000491502 CEP290O15078 2479 aa15.27■□□□□ 0.04
NUP188-208ENST00000491502 SPDYE3A6NKU9 549 aa15.27■□□□□ 0.04
NUP188-208ENST00000491502 PIK3CDO00329 1044 aa15.27■□□□□ 0.04
NUP188-208ENST00000491502 PPP1R11O60927 126 aaPredicted RBP15.27■□□□□ 0.04
NUP188-208ENST00000491502 PGK1P00558 417 aa15.27■□□□□ 0.04
NUP188-208ENST00000491502 GCFC2P16383 781 aaKnown RBP15.27■□□□□ 0.04
NUP188-208ENST00000491502 CMA1P23946 247 aa15.27■□□□□ 0.04
NUP188-208ENST00000491502 ADCYAP1R1P41586 468 aa15.27■□□□□ 0.04
NUP188-208ENST00000491502 TNFAIP2Q03169 654 aa15.27■□□□□ 0.04
NUP188-208ENST00000491502 JAKMIP3Q5VZ66 844 aa15.27■□□□□ 0.04
NUP188-208ENST00000491502 C7orf61Q8IZ16 206 aa15.27■□□□□ 0.04
NUP188-208ENST00000491502 PYM1Q9BRP8 204 aaKnown RBP15.27■□□□□ 0.04
NUP188-208ENST00000491502 FTOQ9C0B1 505 aaKnown RBP eCLIP15.27■□□□□ 0.04
NUP188-208ENST00000491502 PCDHB6Q9Y5E3 794 aa15.27■□□□□ 0.04
NUP188-208ENST00000491502 SRPRBQ9Y5M8 271 aaKnown RBP15.27■□□□□ 0.04
NUP188-208ENST00000491502 MCM3APO60318 1980 aa15.27■□□□□ 0.03
NUP188-208ENST00000491502 ASTN1O14525 1302 aa15.26■□□□□ 0.03
NUP188-208ENST00000491502 MOXD2PA6NHM9 499 aa15.26■□□□□ 0.03
NUP188-208ENST00000491502 GCOM1H8Y6P7 765 aaPredicted RBP15.26■□□□□ 0.03
NUP188-208ENST00000491502 CTAGE5O15320 804 aa15.26■□□□□ 0.03
NUP188-208ENST00000491502 KINO60870 393 aaKnown RBP15.26■□□□□ 0.03
NUP188-208ENST00000491502 ADAMTS4O75173 837 aa15.26■□□□□ 0.03
NUP188-208ENST00000491502 POLR2MP0CAP2 368 aa15.26■□□□□ 0.03
NUP188-208ENST00000491502 USP11P51784 963 aa15.26■□□□□ 0.03
NUP188-208ENST00000491502 GJA9P57773 515 aa15.26■□□□□ 0.03
NUP188-208ENST00000491502 FAM160A1Q05DH4 1040 aa15.26■□□□□ 0.03
NUP188-208ENST00000491502 INF2Q27J81 1249 aa15.26■□□□□ 0.03
NUP188-208ENST00000491502 LRRC26Q2I0M4 334 aa15.26■□□□□ 0.03
NUP188-208ENST00000491502 SLC30A10Q6XR72 485 aa15.26■□□□□ 0.03
NUP188-208ENST00000491502 SLC39A5Q6ZMH5 540 aa15.26■□□□□ 0.03
NUP188-208ENST00000491502 FSIP1Q8NA03 581 aa15.26■□□□□ 0.03
NUP188-208ENST00000491502 PCSK9Q8NBP7 692 aaKnown RBP15.26■□□□□ 0.03
NUP188-208ENST00000491502 KLHDC9Q8NEP7 349 aa15.26■□□□□ 0.03
NUP188-208ENST00000491502 PGBD1Q96JS3 809 aa15.26■□□□□ 0.03
NUP188-208ENST00000491502 UPF3AQ9H1J1 476 aaKnown RBP15.26■□□□□ 0.03
NUP188-208ENST00000491502 Q9Y3F1 56 aa15.26■□□□□ 0.03
NUP188-208ENST00000491502 SYNRGQ9UMZ2 1314 aa15.25■□□□□ 0.03
NUP188-208ENST00000491502 CST5P28325 142 aaPredicted RBP15.25■□□□□ 0.03
NUP188-208ENST00000491502 MARCKSP29966 332 aaPredicted RBP15.25■□□□□ 0.03
NUP188-208ENST00000491502 CLK2P49760 499 aaKnown RBP15.25■□□□□ 0.03
NUP188-208ENST00000491502 NKX3-2P78367 333 aa15.25■□□□□ 0.03
NUP188-208ENST00000491502 ATP2C1P98194 919 aaPredicted RBP15.25■□□□□ 0.03
NUP188-208ENST00000491502 PDE4DQ08499 809 aa15.25■□□□□ 0.03
NUP188-208ENST00000491502 ZNF174Q15697 407 aa15.25■□□□□ 0.03
NUP188-208ENST00000491502 C1orf53Q5VUE5 145 aa15.25■□□□□ 0.03
NUP188-208ENST00000491502 TAPT1Q6NXT6 567 aa15.25■□□□□ 0.03
NUP188-208ENST00000491502 RASGRP4Q8TDF6 673 aa15.25■□□□□ 0.03
NUP188-208ENST00000491502 NSUN6Q8TEA1 469 aaKnown RBP15.25■□□□□ 0.03
NUP188-208ENST00000491502 TBCKQ8TEA7 893 aa15.25■□□□□ 0.03
NUP188-208ENST00000491502 PURBQ96QR8 312 aaKnown RBP15.25■□□□□ 0.03
NUP188-208ENST00000491502 GZF1Q9H116 711 aaPredicted RBP15.25■□□□□ 0.03
NUP188-208ENST00000491502 HOOK1Q9UJC3 728 aaKnown RBP15.25■□□□□ 0.03
NUP188-208ENST00000491502 ALPK3Q96L96 1907 aa15.24■□□□□ 0.03
NUP188-208ENST00000491502 CCNT1O60563 726 aaKnown RBP15.24■□□□□ 0.03
NUP188-208ENST00000491502 C6orf222P0C671 652 aaPredicted RBP15.24■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms