RNA–Protein interactions for RNA: ENST00000491421.5

LSM2-213, Transcript of LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 3

Gene LSM2, Length 820 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM2-213ENST00000491421 MYSM1Q5VVJ2 828 aa9.53□□□□□ -0.88
LSM2-213ENST00000491421 GDF6Q6KF10 455 aaPredicted RBP9.53□□□□□ -0.88
LSM2-213ENST00000491421 DEFB128Q7Z7B8 93 aa9.53□□□□□ -0.88
LSM2-213ENST00000491421 SESTD1Q86VW0 696 aa9.53□□□□□ -0.88
LSM2-213ENST00000491421 RAB11FIP4Q86YS3 637 aa9.53□□□□□ -0.88
LSM2-213ENST00000491421 CMTR1Q8N1G2 835 aaKnown RBP9.53□□□□□ -0.88
LSM2-213ENST00000491421 SRBD1Q8N5C6 995 aaKnown RBP9.53□□□□□ -0.88
LSM2-213ENST00000491421 CCDC155Q8N6L0 562 aa9.53□□□□□ -0.88
LSM2-213ENST00000491421 MAFAQ8NHW3 353 aaPredicted RBP9.53□□□□□ -0.88
LSM2-213ENST00000491421 SMARCC2Q8TAQ2 1214 aa9.53□□□□□ -0.88
LSM2-213ENST00000491421 ZFP91Q96JP5 570 aaPredicted RBP9.53□□□□□ -0.88
LSM2-213ENST00000491421 NEK1Q96PY6 1258 aa9.53□□□□□ -0.88
LSM2-213ENST00000491421 ALG1Q9BT22 464 aa9.53□□□□□ -0.88
LSM2-213ENST00000491421 ZNF576Q9H609 170 aa9.53□□□□□ -0.88
LSM2-213ENST00000491421 MLXIPQ9HAP2 919 aa9.53□□□□□ -0.88
LSM2-213ENST00000491421 MSRAQ9UJ68 235 aa9.53□□□□□ -0.88
LSM2-213ENST00000491421 SLC4A7Q9Y6M7 1214 aa9.53□□□□□ -0.88
LSM2-213ENST00000491421 FRMPD4Q14CM0 1322 aa9.53□□□□□ -0.88
LSM2-213ENST00000491421 PIK3CDO00329 1044 aa9.52□□□□□ -0.89
LSM2-213ENST00000491421 PPFIA4O75335 1185 aa9.52□□□□□ -0.89
LSM2-213ENST00000491421 STAM2O75886 525 aa9.52□□□□□ -0.89
LSM2-213ENST00000491421 ACTN1P12814 892 aa9.52□□□□□ -0.89
LSM2-213ENST00000491421 HOXD8P13378 290 aaPredicted RBP9.52□□□□□ -0.89
LSM2-213ENST00000491421 MRPS9P82933 396 aaKnown RBP9.52□□□□□ -0.89
LSM2-213ENST00000491421 SP2Q02086 613 aa9.52□□□□□ -0.89
LSM2-213ENST00000491421 GRIN2CQ14957 1233 aa9.52□□□□□ -0.89
LSM2-213ENST00000491421 KIAA0753Q2KHM9 967 aa9.52□□□□□ -0.89
LSM2-213ENST00000491421 HSDL1Q3SXM5 330 aa9.52□□□□□ -0.89
LSM2-213ENST00000491421 USP17L6PQ6QN14 398 aa9.52□□□□□ -0.89
LSM2-213ENST00000491421 SYNE3Q6ZMZ3 975 aa9.52□□□□□ -0.89
LSM2-213ENST00000491421 TMTC3Q6ZXV5 915 aa9.52□□□□□ -0.89
LSM2-213ENST00000491421 SGMS1Q86VZ5 419 aa9.52□□□□□ -0.89
LSM2-213ENST00000491421 MICU3Q86XE3 530 aa9.52□□□□□ -0.89
LSM2-213ENST00000491421 CCDC82Q8N4S0 544 aa9.52□□□□□ -0.89
LSM2-213ENST00000491421 FANCBQ8NB91 859 aa9.52□□□□□ -0.89
LSM2-213ENST00000491421 CAGE1Q8TC20 777 aa9.52□□□□□ -0.89
LSM2-213ENST00000491421 GPKOWQ92917 476 aaPredicted RBP eCLIP9.52□□□□□ -0.89
LSM2-213ENST00000491421 VWCEQ96DN2 955 aa9.52□□□□□ -0.89
LSM2-213ENST00000491421 CCDC136Q96JN2 1154 aa9.52□□□□□ -0.89
LSM2-213ENST00000491421 INPP4AQ96PE3 977 aaPredicted RBP9.52□□□□□ -0.89
LSM2-213ENST00000491421 FTOQ9C0B1 505 aaKnown RBP eCLIP9.52□□□□□ -0.89
LSM2-213ENST00000491421 PSTPIP2Q9H939 334 aa9.52□□□□□ -0.89
LSM2-213ENST00000491421 HDAC6Q9UBN7 1215 aa9.52□□□□□ -0.89
LSM2-213ENST00000491421 GTF2IRD1Q9UHL9 959 aa9.52□□□□□ -0.89
LSM2-213ENST00000491421 EYSQ5T1H1 3165 aa9.51□□□□□ -0.89
LSM2-213ENST00000491421 UNC80Q8N2C7 3258 aa9.51□□□□□ -0.89
LSM2-213ENST00000491421 hCG_1642624A0A1W2PR95 340 aa9.51□□□□□ -0.89
LSM2-213ENST00000491421 SPATA31C2B4DYI2 1134 aa9.51□□□□□ -0.89
LSM2-213ENST00000491421 HAS3O00219 553 aa9.51□□□□□ -0.89
LSM2-213ENST00000491421 NOP56O00567 594 aaKnown RBP9.51□□□□□ -0.89
LSM2-213ENST00000491421 MEIS2O14770 477 aa9.51□□□□□ -0.89
LSM2-213ENST00000491421 FIBPO43427 364 aa9.51□□□□□ -0.89
LSM2-213ENST00000491421 IQCF3P0C7M6 154 aa9.51□□□□□ -0.89
LSM2-213ENST00000491421 SELPP16109 830 aa9.51□□□□□ -0.89
LSM2-213ENST00000491421 ATP2A2P16615 1042 aaKnown RBP9.51□□□□□ -0.89
LSM2-213ENST00000491421 ICAM3P32942 547 aa9.51□□□□□ -0.89
LSM2-213ENST00000491421 KRT32Q14532 448 aa9.51□□□□□ -0.89
LSM2-213ENST00000491421 PCNX4Q63HM2 1172 aa9.51□□□□□ -0.89
LSM2-213ENST00000491421 XRRA1Q6P2D8 792 aa9.51□□□□□ -0.89
LSM2-213ENST00000491421 APOA5Q6Q788 366 aa9.51□□□□□ -0.89
LSM2-213ENST00000491421 DHX32Q7L7V1 743 aaKnown RBP9.51□□□□□ -0.89
LSM2-213ENST00000491421 HEATR3Q7Z4Q2 680 aa9.51□□□□□ -0.89
LSM2-213ENST00000491421 PHF6Q8IWS0 365 aaKnown RBP eCLIP9.51□□□□□ -0.89
LSM2-213ENST00000491421 RASEFQ8IZ41 740 aa9.51□□□□□ -0.89
LSM2-213ENST00000491421 AFAP1L1Q8TED9 768 aa9.51□□□□□ -0.89
LSM2-213ENST00000491421 TCEANC2Q96MN5 208 aa9.51□□□□□ -0.89
LSM2-213ENST00000491421 CTAGE1Q96RT6 745 aa9.51□□□□□ -0.89
LSM2-213ENST00000491421 NKX2-4Q9H2Z4 354 aa9.51□□□□□ -0.89
LSM2-213ENST00000491421 SLC28A3Q9HAS3 691 aa9.51□□□□□ -0.89
LSM2-213ENST00000491421 RTEL1Q9NZ71 1219 aa9.51□□□□□ -0.89
LSM2-213ENST00000491421 SCN10AQ9Y5Y9 1956 aa9.51□□□□□ -0.89
LSM2-213ENST00000491421 CHD9Q3L8U1 2897 aa9.51□□□□□ -0.89
LSM2-213ENST00000491421 DLL1O00548 723 aa9.5□□□□□ -0.89
LSM2-213ENST00000491421 ZBTB43O43298 467 aa9.5□□□□□ -0.89
LSM2-213ENST00000491421 HMGB1P09429 215 aaKnown RBP9.5□□□□□ -0.89
LSM2-213ENST00000491421 RABGGTBP53611 331 aa9.5□□□□□ -0.89
LSM2-213ENST00000491421 EXOSC10Q01780 885 aaKnown RBP9.5□□□□□ -0.89
LSM2-213ENST00000491421 RBL2Q08999 1139 aa9.5□□□□□ -0.89
LSM2-213ENST00000491421 SEMA3FQ13275 785 aa9.5□□□□□ -0.89
LSM2-213ENST00000491421 PTK7Q13308 1070 aa9.5□□□□□ -0.89
LSM2-213ENST00000491421 NEDD9Q14511 834 aa9.5□□□□□ -0.89
LSM2-213ENST00000491421 UBE2SQ16763 222 aa9.5□□□□□ -0.89
LSM2-213ENST00000491421 ADCK5Q3MIX3 580 aa9.5□□□□□ -0.89
LSM2-213ENST00000491421 TSGA10IPQ3SY00 556 aa9.5□□□□□ -0.89
LSM2-213ENST00000491421 METTL7BQ6UX53 244 aa9.5□□□□□ -0.89
LSM2-213ENST00000491421 LRRC8DQ7L1W4 858 aa9.5□□□□□ -0.89
LSM2-213ENST00000491421 CYFIP1Q7L576 1253 aa9.5□□□□□ -0.89
LSM2-213ENST00000491421 NLRX1Q86UT6 975 aa9.5□□□□□ -0.89
LSM2-213ENST00000491421 DHX38Q92620 1227 aaKnown RBP9.5□□□□□ -0.89
LSM2-213ENST00000491421 GAS2L1Q99501 681 aaPredicted RBP9.5□□□□□ -0.89
LSM2-213ENST00000491421 C16orf70Q9BSU1 422 aa9.5□□□□□ -0.89
LSM2-213ENST00000491421 PRDM12Q9H4Q4 367 aa9.5□□□□□ -0.89
LSM2-213ENST00000491421 BCAS3Q9H6U6 928 aa9.5□□□□□ -0.89
LSM2-213ENST00000491421 RBM28Q9NW13 759 aaKnown RBP9.5□□□□□ -0.89
LSM2-213ENST00000491421 YBX2Q9Y2T7 364 aaKnown RBP9.5□□□□□ -0.89
LSM2-213ENST00000491421 PCDHA11Q9Y5I1 949 aa9.5□□□□□ -0.89
LSM2-213ENST00000491421 KLF18A0A0U1RQI7 1052 aa9.49□□□□□ -0.89
LSM2-213ENST00000491421 C17orf102A2RUQ5 167 aa9.49□□□□□ -0.89
LSM2-213ENST00000491421 SPDYE3A6NKU9 549 aa9.49□□□□□ -0.89
LSM2-213ENST00000491421 GOLGA8AA7E2F4 631 aa9.49□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms