RNA–Protein interactions for RNA: ENST00000491349.5

RNF38-209, Transcript of ring finger protein 38, humanhuman

TSL 5

Gene RNF38, Length 959 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF38-209ENST00000491349 AIFM3Q96NN9 605 aa9.43□□□□□ -0.9
RNF38-209ENST00000491349 MCOLN1Q9GZU1 580 aa9.43□□□□□ -0.9
RNF38-209ENST00000491349 AP5M1Q9H0R1 490 aa9.43□□□□□ -0.9
RNF38-209ENST00000491349 ZSCAN16Q9H4T2 348 aaPredicted RBP9.43□□□□□ -0.9
RNF38-209ENST00000491349 ATP6V1DQ9Y5K8 247 aa9.43□□□□□ -0.9
RNF38-209ENST00000491349 MRVI1Q9Y6F6 885 aa9.43□□□□□ -0.9
RNF38-209ENST00000491349 C2orf72A6NCS6 295 aa9.42□□□□□ -0.9
RNF38-209ENST00000491349 OPLAHO14841 1288 aa9.42□□□□□ -0.9
RNF38-209ENST00000491349 SEPT4O43236 478 aa9.42□□□□□ -0.9
RNF38-209ENST00000491349 FIBPO43427 364 aa9.42□□□□□ -0.9
RNF38-209ENST00000491349 STX6O43752 255 aa9.42□□□□□ -0.9
RNF38-209ENST00000491349 TRAPPC10P48553 1259 aa9.42□□□□□ -0.9
RNF38-209ENST00000491349 CLK2P49760 499 aaKnown RBP9.42□□□□□ -0.9
RNF38-209ENST00000491349 TNFAIP2Q03169 654 aa9.42□□□□□ -0.9
RNF38-209ENST00000491349 CACNB2Q08289 660 aaPredicted RBP9.42□□□□□ -0.9
RNF38-209ENST00000491349 ST3GAL1Q11201 340 aa9.42□□□□□ -0.9
RNF38-209ENST00000491349 ORC2Q13416 577 aaPredicted RBP9.42□□□□□ -0.9
RNF38-209ENST00000491349 MTMR1Q13613 665 aa9.42□□□□□ -0.9
RNF38-209ENST00000491349 NEDD9Q14511 834 aa9.42□□□□□ -0.9
RNF38-209ENST00000491349 CCL14Q16627 93 aa9.42□□□□□ -0.9
RNF38-209ENST00000491349 RILPL1Q5EBL4 403 aa9.42□□□□□ -0.9
RNF38-209ENST00000491349 TYW1BQ6NUM6 668 aa9.42□□□□□ -0.9
RNF38-209ENST00000491349 EEPD1Q7L9B9 569 aa9.42□□□□□ -0.9
RNF38-209ENST00000491349 NIPA1Q7RTP0 329 aa9.42□□□□□ -0.9
RNF38-209ENST00000491349 VSIG10LQ86VR7 867 aa9.42□□□□□ -0.9
RNF38-209ENST00000491349 NOSTRINQ8IVI9 506 aa9.42□□□□□ -0.9
RNF38-209ENST00000491349 MORC4Q8TE76 937 aa9.42□□□□□ -0.9
RNF38-209ENST00000491349 TBCKQ8TEA7 893 aa9.42□□□□□ -0.9
RNF38-209ENST00000491349 SH3TC2Q8TF17 1288 aa9.42□□□□□ -0.9
RNF38-209ENST00000491349 GPRASP2Q96D09 838 aa9.42□□□□□ -0.9
RNF38-209ENST00000491349 SDF4Q9BRK5 362 aa9.42□□□□□ -0.9
RNF38-209ENST00000491349 RNF208Q9H0X6 261 aa9.42□□□□□ -0.9
RNF38-209ENST00000491349 TMEM260Q9NX78 707 aa9.42□□□□□ -0.9
RNF38-209ENST00000491349 CEP131Q9UPN4 1083 aa9.42□□□□□ -0.9
RNF38-209ENST00000491349 MCM3APO60318 1980 aa9.42□□□□□ -0.9
RNF38-209ENST00000491349 MYH7BA7E2Y1 1941 aa9.41□□□□□ -0.9
RNF38-209ENST00000491349 FRMPD4Q14CM0 1322 aa9.41□□□□□ -0.9
RNF38-209ENST00000491349 BTBD18B2RXH4 712 aa9.41□□□□□ -0.9
RNF38-209ENST00000491349 NOP56O00567 594 aaKnown RBP9.41□□□□□ -0.9
RNF38-209ENST00000491349 CCNT1O60563 726 aaKnown RBP9.41□□□□□ -0.9
RNF38-209ENST00000491349 BMP15O95972 392 aa9.41□□□□□ -0.9
RNF38-209ENST00000491349 CYP3A4P08684 503 aa9.41□□□□□ -0.9
RNF38-209ENST00000491349 TXNP10599 105 aaKnown RBP9.41□□□□□ -0.9
RNF38-209ENST00000491349 SYT1P21579 422 aa9.41□□□□□ -0.9
RNF38-209ENST00000491349 EDNRBP24530 442 aa9.41□□□□□ -0.9
RNF38-209ENST00000491349 NUCB2P80303 420 aa9.41□□□□□ -0.9
RNF38-209ENST00000491349 LETM2Q2VYF4 491 aa9.41□□□□□ -0.9
RNF38-209ENST00000491349 CEP55Q53EZ4 464 aa9.41□□□□□ -0.9
RNF38-209ENST00000491349 ARSIQ5FYB1 569 aa9.41□□□□□ -0.9
RNF38-209ENST00000491349 MOXD1Q6UVY6 613 aa9.41□□□□□ -0.9
RNF38-209ENST00000491349 RNF180Q86T96 592 aa9.41□□□□□ -0.9
RNF38-209ENST00000491349 PLA2G4DQ86XP0 818 aa9.41□□□□□ -0.9
RNF38-209ENST00000491349 ARRDC4Q8NCT1 418 aa9.41□□□□□ -0.9
RNF38-209ENST00000491349 RASGRP4Q8TDF6 673 aa9.41□□□□□ -0.9
RNF38-209ENST00000491349 PGBD1Q96JS3 809 aa9.41□□□□□ -0.9
RNF38-209ENST00000491349 MXRA8Q9BRK3 442 aa9.41□□□□□ -0.9
RNF38-209ENST00000491349 WDR11Q9BZH6 1224 aa9.41□□□□□ -0.9
RNF38-209ENST00000491349 MLXIPQ9HAP2 919 aa9.41□□□□□ -0.9
RNF38-209ENST00000491349 RTEL1Q9NZ71 1219 aa9.41□□□□□ -0.9
RNF38-209ENST00000491349 COL20A1Q9P218 1284 aa9.41□□□□□ -0.9
RNF38-209ENST00000491349 LCTP09848 1927 aa9.41□□□□□ -0.9
RNF38-209ENST00000491349 PPP1R37O75864 691 aa9.4□□□□□ -0.9
RNF38-209ENST00000491349 SNAI1O95863 264 aaPredicted RBP9.4□□□□□ -0.9
RNF38-209ENST00000491349 GH1P01241 217 aa9.4□□□□□ -0.9
RNF38-209ENST00000491349 CYBAP13498 195 aa9.4□□□□□ -0.9
RNF38-209ENST00000491349 CCL5P13501 91 aa9.4□□□□□ -0.9
RNF38-209ENST00000491349 CPT1AP50416 773 aa9.4□□□□□ -0.9
RNF38-209ENST00000491349 INF2Q27J81 1249 aa9.4□□□□□ -0.9
RNF38-209ENST00000491349 TMEM266Q2M3C6 531 aa9.4□□□□□ -0.9
RNF38-209ENST00000491349 CCDC144BQ3MJ40 725 aa9.4□□□□□ -0.9
RNF38-209ENST00000491349 FBXO16Q8IX29 292 aaPredicted RBP9.4□□□□□ -0.9
RNF38-209ENST00000491349 DHX37Q8IY37 1157 aaKnown RBP9.4□□□□□ -0.9
RNF38-209ENST00000491349 SLFN12Q8IYM2 578 aa9.4□□□□□ -0.9
RNF38-209ENST00000491349 TNS4Q8IZW8 715 aa9.4□□□□□ -0.9
RNF38-209ENST00000491349 ZNF687Q8N1G0 1237 aa9.4□□□□□ -0.9
RNF38-209ENST00000491349 TNPO1Q92973 898 aaKnown RBP9.4□□□□□ -0.9
RNF38-209ENST00000491349 ARMC5Q96C12 935 aa9.4□□□□□ -0.9
RNF38-209ENST00000491349 ZNF396Q96N95 335 aaPredicted RBP9.4□□□□□ -0.9
RNF38-209ENST00000491349 PURBQ96QR8 312 aaKnown RBP9.4□□□□□ -0.9
RNF38-209ENST00000491349 RAB34Q9BZG1 259 aa9.4□□□□□ -0.9
RNF38-209ENST00000491349 XRN2Q9H0D6 950 aaKnown RBP eCLIP9.4□□□□□ -0.99e-6■■□□□ 13.2
RNF38-209ENST00000491349 JADE2Q9NQC1 790 aa9.4□□□□□ -0.9
RNF38-209ENST00000491349 TBC1D22BQ9NU19 505 aa9.4□□□□□ -0.9
RNF38-209ENST00000491349 FLRT1Q9NZU1 646 aa9.4□□□□□ -0.9
RNF38-209ENST00000491349 DDX20Q9UHI6 824 aaKnown RBP9.4□□□□□ -0.9
RNF38-209ENST00000491349 DDX25Q9UHL0 483 aaKnown RBP9.4□□□□□ -0.9
RNF38-209ENST00000491349 Q9Y3F1 56 aa9.4□□□□□ -0.9
RNF38-209ENST00000491349 KBTBD13C9JR72 458 aa9.39□□□□□ -0.91
RNF38-209ENST00000491349 LAD1O00515 517 aa9.39□□□□□ -0.91
RNF38-209ENST00000491349 NEMFO60524 1076 aa9.39□□□□□ -0.91
RNF38-209ENST00000491349 KPNA6O60684 536 aa9.39□□□□□ -0.91
RNF38-209ENST00000491349 DUSP11O75319 330 aaKnown RBP9.39□□□□□ -0.91
RNF38-209ENST00000491349 MYCP01106 439 aaPredicted RBP9.39□□□□□ -0.91
RNF38-209ENST00000491349 TFRCP02786 760 aaKnown RBP9.39□□□□□ -0.91
RNF38-209ENST00000491349 ATP2B1P20020 1258 aa9.39□□□□□ -0.91
RNF38-209ENST00000491349 U2AF2P26368 475 aaKnown RBP eCLIP9.39□□□□□ -0.91
RNF38-209ENST00000491349 ICAM3P32942 547 aa9.39□□□□□ -0.91
RNF38-209ENST00000491349 NR5A1Q13285 461 aa9.39□□□□□ -0.91
RNF38-209ENST00000491349 LAMC2Q13753 1193 aa9.39□□□□□ -0.91
RNF38-209ENST00000491349 DUSP28Q4G0W2 176 aa9.39□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms