RNA–Protein interactions for RNA: ENST00000491183.5

HMGN1-219, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 527 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-219ENST00000491183 PTGISQ16647 500 aa20.76■□□□□ 0.91
HMGN1-219ENST00000491183 APOA5Q6Q788 366 aa20.76■□□□□ 0.91
HMGN1-219ENST00000491183 MICU3Q86XE3 530 aa20.76■□□□□ 0.91
HMGN1-219ENST00000491183 SMARCC2Q8TAQ2 1214 aa20.76■□□□□ 0.91
HMGN1-219ENST00000491183 MYLIPQ8WY64 445 aa20.76■□□□□ 0.91
HMGN1-219ENST00000491183 SPATA33Q96N06 139 aa20.76■□□□□ 0.91
HMGN1-219ENST00000491183 PBX4Q9BYU1 374 aa20.76■□□□□ 0.91
HMGN1-219ENST00000491183 RTEL1Q9NZ71 1219 aa20.76■□□□□ 0.91
HMGN1-219ENST00000491183 BRPF3Q9ULD4 1205 aa20.76■□□□□ 0.91
HMGN1-219ENST00000491183 SPATA31C2B4DYI2 1134 aa20.75■□□□□ 0.91
HMGN1-219ENST00000491183 PITPNM1O00562 1244 aa20.75■□□□□ 0.91
HMGN1-219ENST00000491183 F2P00734 622 aa20.75■□□□□ 0.91
HMGN1-219ENST00000491183 IQCF3P0C7M6 154 aa20.75■□□□□ 0.91
HMGN1-219ENST00000491183 ZNF286BP0CG31 522 aa20.75■□□□□ 0.91
HMGN1-219ENST00000491183 ICAM3P32942 547 aa20.75■□□□□ 0.91
HMGN1-219ENST00000491183 SEMA3FQ13275 785 aa20.75■□□□□ 0.91
HMGN1-219ENST00000491183 DEFB128Q7Z7B8 93 aa20.75■□□□□ 0.91
HMGN1-219ENST00000491183 CUL5Q93034 780 aa20.75■□□□□ 0.91
HMGN1-219ENST00000491183 INPP4AQ96PE3 977 aaPredicted RBP20.75■□□□□ 0.91
HMGN1-219ENST00000491183 ALG1Q9BT22 464 aa20.75■□□□□ 0.91
HMGN1-219ENST00000491183 HDAC6Q9UBN7 1215 aa20.75■□□□□ 0.91
HMGN1-219ENST00000491183 STAM2O75886 525 aa20.74■□□□□ 0.91
HMGN1-219ENST00000491183 MFSD10Q14728 455 aa20.74■□□□□ 0.91
HMGN1-219ENST00000491183 GRIN2CQ14957 1233 aa20.74■□□□□ 0.91
HMGN1-219ENST00000491183 KIAA0753Q2KHM9 967 aa20.74■□□□□ 0.91
HMGN1-219ENST00000491183 RETREG2Q8NC44 543 aa20.74■□□□□ 0.91
HMGN1-219ENST00000491183 KCNB2Q92953 911 aa20.74■□□□□ 0.91
HMGN1-219ENST00000491183 TIFAQ96CG3 184 aa20.74■□□□□ 0.91
HMGN1-219ENST00000491183 ZNF576Q9H609 170 aa20.74■□□□□ 0.91
HMGN1-219ENST00000491183 PSTPIP2Q9H939 334 aa20.74■□□□□ 0.91
HMGN1-219ENST00000491183 MLXIPQ9HAP2 919 aa20.74■□□□□ 0.91
HMGN1-219ENST00000491183 GTF2IRD1Q9UHL9 959 aa20.74■□□□□ 0.91
HMGN1-219ENST00000491183 NOD1Q9Y239 953 aa20.74■□□□□ 0.91
HMGN1-219ENST00000491183 GBF1Q92538 1859 aa20.73■□□□□ 0.91
HMGN1-219ENST00000491183 DOCK5Q9H7D0 1870 aa20.73■□□□□ 0.91
HMGN1-219ENST00000491183 FUT2Q10981 343 aa20.73■□□□□ 0.91
HMGN1-219ENST00000491183 BFSP2Q13515 415 aa20.73■□□□□ 0.91
HMGN1-219ENST00000491183 GNPTABQ3T906 1256 aa20.73■□□□□ 0.91
HMGN1-219ENST00000491183 PCNX4Q63HM2 1172 aa20.73■□□□□ 0.91
HMGN1-219ENST00000491183 SYNE3Q6ZMZ3 975 aa20.73■□□□□ 0.91
HMGN1-219ENST00000491183 C7orf31Q8N865 590 aa20.73■□□□□ 0.91
HMGN1-219ENST00000491183 DHX38Q92620 1227 aaKnown RBP20.73■□□□□ 0.91
HMGN1-219ENST00000491183 C16orf70Q9BSU1 422 aa20.73■□□□□ 0.91
HMGN1-219ENST00000491183 KATNAL1Q9BW62 490 aa20.73■□□□□ 0.91
HMGN1-219ENST00000491183 MTIF3Q9H2K0 278 aaKnown RBP20.73■□□□□ 0.91
HMGN1-219ENST00000491183 PFKMP08237 780 aa20.72■□□□□ 0.91
HMGN1-219ENST00000491183 RFC2P35250 354 aa20.72■□□□□ 0.91
HMGN1-219ENST00000491183 HIC1Q14526 733 aa20.72■□□□□ 0.91
HMGN1-219ENST00000491183 KRT32Q14532 448 aa20.72■□□□□ 0.91
HMGN1-219ENST00000491183 TELO2Q9Y4R8 837 aa20.72■□□□□ 0.91
HMGN1-219ENST00000491183 TANC1Q9C0D5 1861 aa20.72■□□□□ 0.91
HMGN1-219ENST00000491183 TET1Q8NFU7 2136 aa20.72■□□□□ 0.91
HMGN1-219ENST00000491183 ZBTB43O43298 467 aa20.71■□□□□ 0.91
HMGN1-219ENST00000491183 FIBPO43427 364 aa20.71■□□□□ 0.91
HMGN1-219ENST00000491183 CPA1P15085 419 aa20.71■□□□□ 0.91
HMGN1-219ENST00000491183 ZNF200P98182 395 aaPredicted RBP20.71■□□□□ 0.91
HMGN1-219ENST00000491183 GPNMBQ14956 572 aa20.71■□□□□ 0.91
HMGN1-219ENST00000491183 UBE2SQ16763 222 aa20.71■□□□□ 0.91
HMGN1-219ENST00000491183 XRRA1Q6P2D8 792 aa20.71■□□□□ 0.91
HMGN1-219ENST00000491183 FAM217BQ9NTX9 383 aaPredicted RBP20.71■□□□□ 0.91
HMGN1-219ENST00000491183 RBM28Q9NW13 759 aaKnown RBP20.71■□□□□ 0.91
HMGN1-219ENST00000491183 SLC4A7Q9Y6M7 1214 aa20.71■□□□□ 0.91
HMGN1-219ENST00000491183 CNTNAP5Q8WYK1 1306 aa20.71■□□□□ 0.91
HMGN1-219ENST00000491183 HSPA4P34932 840 aa20.7■□□□□ 0.9
HMGN1-219ENST00000491183 NEDD9Q14511 834 aa20.7■□□□□ 0.9
HMGN1-219ENST00000491183 RTN1Q16799 776 aa20.7■□□□□ 0.9
HMGN1-219ENST00000491183 METTL7BQ6UX53 244 aa20.7■□□□□ 0.9
HMGN1-219ENST00000491183 CYFIP1Q7L576 1253 aa20.7■□□□□ 0.9
HMGN1-219ENST00000491183 HEATR3Q7Z4Q2 680 aa20.7■□□□□ 0.9
HMGN1-219ENST00000491183 CAGE1Q8TC20 777 aa20.7■□□□□ 0.9
HMGN1-219ENST00000491183 AFAP1L1Q8TED9 768 aa20.7■□□□□ 0.9
HMGN1-219ENST00000491183 YBX2Q9Y2T7 364 aaKnown RBP20.7■□□□□ 0.9
HMGN1-219ENST00000491183 SNX14Q9Y5W7 946 aa20.7■□□□□ 0.9
HMGN1-219ENST00000491183 CDH23Q9H251 3354 aa20.7■□□□□ 0.9
HMGN1-219ENST00000491183 KLF18A0A0U1RQI7 1052 aa20.69■□□□□ 0.9
HMGN1-219ENST00000491183 ZBBXA8MT70 800 aa20.69■□□□□ 0.9
HMGN1-219ENST00000491183 RBAK-RBAKDNI3L0D1 243 aa20.69■□□□□ 0.9
HMGN1-219ENST00000491183 HMGB1P09429 215 aaKnown RBP20.69■□□□□ 0.9
HMGN1-219ENST00000491183 CKBP12277 381 aa20.69■□□□□ 0.9
HMGN1-219ENST00000491183 CDC27P30260 824 aa20.69■□□□□ 0.9
HMGN1-219ENST00000491183 RABGGTBP53611 331 aa20.69■□□□□ 0.9
HMGN1-219ENST00000491183 RBL2Q08999 1139 aa20.69■□□□□ 0.9
HMGN1-219ENST00000491183 RAB30Q15771 203 aa20.69■□□□□ 0.9
HMGN1-219ENST00000491183 WWC2Q6AWC2 1192 aa20.69■□□□□ 0.9
HMGN1-219ENST00000491183 TYW1BQ6NUM6 668 aa20.69■□□□□ 0.9
HMGN1-219ENST00000491183 WNT8BQ93098 351 aa20.69■□□□□ 0.9
HMGN1-219ENST00000491183 GPR20Q99678 358 aa20.69■□□□□ 0.9
HMGN1-219ENST00000491183 NKX2-4Q9H2Z4 354 aa20.69■□□□□ 0.9
HMGN1-219ENST00000491183 MSRAQ9UJ68 235 aa20.69■□□□□ 0.9
HMGN1-219ENST00000491183 PCDHA6Q9UN73 950 aa20.69■□□□□ 0.9
HMGN1-219ENST00000491183 PCDHA8Q9Y5H6 950 aa20.69■□□□□ 0.9
HMGN1-219ENST00000491183 V9GY48 417 aaPredicted RBP20.69■□□□□ 0.9
HMGN1-219ENST00000491183 H3BRB1 525 aa20.68■□□□□ 0.9
HMGN1-219ENST00000491183 ATP9AO75110 1047 aa20.68■□□□□ 0.9
HMGN1-219ENST00000491183 LGALS2P05162 132 aa20.68■□□□□ 0.9
HMGN1-219ENST00000491183 FOSL2P15408 326 aa20.68■□□□□ 0.9
HMGN1-219ENST00000491183 SELPP16109 830 aa20.68■□□□□ 0.9
HMGN1-219ENST00000491183 PTK7Q13308 1070 aa20.68■□□□□ 0.9
HMGN1-219ENST00000491183 TRIM71Q2Q1W2 868 aaKnown RBP20.68■□□□□ 0.9
HMGN1-219ENST00000491183 LRRC8DQ7L1W4 858 aa20.68■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms