RNA–Protein interactions for RNA: ENST00000491094.6

VPS72-205, Transcript of vacuolar protein sorting 72 homolog, humanhuman

TSL 5

Gene VPS72, Length 4,267 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS72-205ENST00000491094 FLT1P17948 1338 aa12.3□□□□□ -0.44
VPS72-205ENST00000491094 FGFR1OPO95684 399 aaKnown RBP12.3□□□□□ -0.44
VPS72-205ENST00000491094 INPP5BP32019 993 aa12.3□□□□□ -0.44
VPS72-205ENST00000491094 AARSP49588 968 aaKnown RBP eCLIP12.3□□□□□ -0.44
VPS72-205ENST00000491094 SNAP25P60880 206 aa12.3□□□□□ -0.44
VPS72-205ENST00000491094 ANKRD2Q9GZV1 360 aa12.3□□□□□ -0.44
VPS72-205ENST00000491094 PANK4Q9NVE7 773 aa12.3□□□□□ -0.44
VPS72-205ENST00000491094 PALM3A6NDB9 673 aaPredicted RBP12.3□□□□□ -0.44
VPS72-205ENST00000491094 SBK1Q52WX2 424 aa12.3□□□□□ -0.44
VPS72-205ENST00000491094 KCTD1Q719H9 257 aa12.3□□□□□ -0.44
VPS72-205ENST00000491094 AK8Q96MA6 479 aa12.3□□□□□ -0.44
VPS72-205ENST00000491094 ZMYND12Q9H0C1 365 aa12.3□□□□□ -0.44
VPS72-205ENST00000491094 SEPT11Q9NVA2 429 aaKnown RBP12.3□□□□□ -0.44
VPS72-205ENST00000491094 CAPN7Q9Y6W3 813 aa12.3□□□□□ -0.44
VPS72-205ENST00000491094 EPHB4P54760 987 aa12.3□□□□□ -0.44
VPS72-205ENST00000491094 IKQ13123 557 aaPredicted RBP12.3□□□□□ -0.44
VPS72-205ENST00000491094 FAM26FQ5R3K3 315 aa12.3□□□□□ -0.44
VPS72-205ENST00000491094 TADA2BQ86TJ2 420 aa12.3□□□□□ -0.44
VPS72-205ENST00000491094 IFT20Q8IY31 132 aa12.3□□□□□ -0.44
VPS72-205ENST00000491094 AENQ8WTP8 325 aaKnown RBP12.3□□□□□ -0.44
VPS72-205ENST00000491094 PNMA5Q96PV4 448 aa12.3□□□□□ -0.44
VPS72-205ENST00000491094 SIK3Q9Y2K2 1263 aa12.3□□□□□ -0.44
VPS72-205ENST00000491094 LAMB4A4D0S4 1761 aa12.29□□□□□ -0.44
VPS72-205ENST00000491094 A0A087X0T9 212 aa12.29□□□□□ -0.44
VPS72-205ENST00000491094 FAM228BP0C875 321 aa12.29□□□□□ -0.44
VPS72-205ENST00000491094 STAT3P40763 770 aa12.29□□□□□ -0.44
VPS72-205ENST00000491094 TTMPQ5BVD1 217 aa12.29□□□□□ -0.44
VPS72-205ENST00000491094 KLHDC7AQ5VTJ3 777 aa12.29□□□□□ -0.44
VPS72-205ENST00000491094 CENPPQ6IPU0 288 aa12.29□□□□□ -0.44
VPS72-205ENST00000491094 UNC13DQ70J99 1090 aa12.29□□□□□ -0.44
VPS72-205ENST00000491094 OTUD6BQ8N6M0 293 aa12.29□□□□□ -0.44
VPS72-205ENST00000491094 RAB34Q9BZG1 259 aa12.29□□□□□ -0.44
VPS72-205ENST00000491094 PCDHA12Q9UN75 941 aa12.29□□□□□ -0.44
VPS72-205ENST00000491094 SLIT2O94813 1529 aa12.29□□□□□ -0.44
VPS72-205ENST00000491094 MYH6P13533 1939 aa12.29□□□□□ -0.44
VPS72-205ENST00000491094 USP17L15C9J2P7 530 aa12.29□□□□□ -0.44
VPS72-205ENST00000491094 USP17L13C9JLJ4 530 aa12.29□□□□□ -0.44
VPS72-205ENST00000491094 USP17L11C9JVI0 530 aa12.29□□□□□ -0.44
VPS72-205ENST00000491094 USP17L18D6R9N7 530 aa12.29□□□□□ -0.44
VPS72-205ENST00000491094 USP17L22D6RA61 530 aa12.29□□□□□ -0.44
VPS72-205ENST00000491094 USP17L17D6RBQ6 530 aa12.29□□□□□ -0.44
VPS72-205ENST00000491094 USP17L19D6RCP7 530 aa12.29□□□□□ -0.44
VPS72-205ENST00000491094 USP17L20D6RJB6 530 aa12.29□□□□□ -0.44
VPS72-205ENST00000491094 ADCY7P51828 1080 aa12.29□□□□□ -0.44
VPS72-205ENST00000491094 USP17L24Q0WX57 530 aa12.29□□□□□ -0.44
VPS72-205ENST00000491094 USP17L6PQ6QN14 398 aa12.29□□□□□ -0.44
VPS72-205ENST00000491094 UTP3Q9NQZ2 479 aaKnown RBP eCLIP12.29□□□□□ -0.442e-6■■■■■ 149.1
VPS72-205ENST00000491094 ZC3H4Q9UPT8 1303 aaKnown RBP12.29□□□□□ -0.44
VPS72-205ENST00000491094 SMIM23A6NLE4 172 aa12.29□□□□□ -0.44
VPS72-205ENST00000491094 UFL1O94874 794 aa12.29□□□□□ -0.44
VPS72-205ENST00000491094 ECM1Q16610 540 aa12.29□□□□□ -0.44
VPS72-205ENST00000491094 DPP8Q6V1X1 898 aaPredicted RBP12.29□□□□□ -0.44
VPS72-205ENST00000491094 WDR66Q8TBY9 1149 aa12.29□□□□□ -0.44
VPS72-205ENST00000491094 LDHCP07864 332 aa12.28□□□□□ -0.44
VPS72-205ENST00000491094 ADAM9Q13443 819 aa12.28□□□□□ -0.44
VPS72-205ENST00000491094 PDXDC1Q6P996 788 aa12.28□□□□□ -0.44
VPS72-205ENST00000491094 MMGT1Q8N4V1 131 aa12.28□□□□□ -0.44
VPS72-205ENST00000491094 SFI1A8K8P3 1242 aa12.28□□□□□ -0.44
VPS72-205ENST00000491094 M0R2N6 131 aa12.28□□□□□ -0.44
VPS72-205ENST00000491094 LAD1O00515 517 aa12.28□□□□□ -0.44
VPS72-205ENST00000491094 MYL1P05976 194 aa12.28□□□□□ -0.44
VPS72-205ENST00000491094 KCNMA1Q12791 1236 aa12.28□□□□□ -0.44
VPS72-205ENST00000491094 LLGL1Q15334 1064 aa12.28□□□□□ -0.44
VPS72-205ENST00000491094 MFSD14BQ5SR56 506 aa12.28□□□□□ -0.44
VPS72-205ENST00000491094 SLC30A10Q6XR72 485 aa12.28□□□□□ -0.44
VPS72-205ENST00000491094 GPBP1Q86WP2 473 aa12.28□□□□□ -0.44
VPS72-205ENST00000491094 RNPC3Q96LT9 517 aaKnown RBP12.28□□□□□ -0.44
VPS72-205ENST00000491094 CUEDC2Q9H467 287 aa12.28□□□□□ -0.44
VPS72-205ENST00000491094 ZNF287Q9HBT7 754 aa12.28□□□□□ -0.44
VPS72-205ENST00000491094 COL4A3BPQ9Y5P4 624 aa12.28□□□□□ -0.44
VPS72-205ENST00000491094 GOLGA6L10A6NI86 522 aa12.28□□□□□ -0.44
VPS72-205ENST00000491094 FAM196BA6NMK8 535 aa12.28□□□□□ -0.44
VPS72-205ENST00000491094 E7EVH7 732 aa12.28□□□□□ -0.44
VPS72-205ENST00000491094 FKBP3Q00688 224 aaKnown RBP12.28□□□□□ -0.44
VPS72-205ENST00000491094 UBLCP1Q8WVY7 318 aaPredicted RBP12.28□□□□□ -0.44
VPS72-205ENST00000491094 LRP6O75581 1613 aa12.28□□□□□ -0.44
VPS72-205ENST00000491094 TAF1P21675 1872 aa12.28□□□□□ -0.44
VPS72-205ENST00000491094 POTEB3A0JP26 581 aa12.28□□□□□ -0.44
VPS72-205ENST00000491094 POTECB2RU33 542 aa12.28□□□□□ -0.44
VPS72-205ENST00000491094 GOLGA8KD6RF30 607 aa12.28□□□□□ -0.44
VPS72-205ENST00000491094 CYP4A11Q02928 519 aa12.28□□□□□ -0.44
VPS72-205ENST00000491094 POTEBQ6S5H4 581 aa12.28□□□□□ -0.44
VPS72-205ENST00000491094 IPO4Q8TEX9 1081 aaKnown RBP12.28□□□□□ -0.44
VPS72-205ENST00000491094 DPH5Q9H2P9 285 aa12.28□□□□□ -0.44
VPS72-205ENST00000491094 DDX25Q9UHL0 483 aaKnown RBP12.28□□□□□ -0.44
VPS72-205ENST00000491094 BCS1LQ9Y276 419 aa12.28□□□□□ -0.44
VPS72-205ENST00000491094 A0A087WUV0 522 aaPredicted RBP12.27□□□□□ -0.44
VPS72-205ENST00000491094 PRPHP41219 470 aa12.27□□□□□ -0.44
VPS72-205ENST00000491094 COASYQ13057 564 aa12.27□□□□□ -0.44
VPS72-205ENST00000491094 GALNT17Q6IS24 598 aa12.27□□□□□ -0.44
VPS72-205ENST00000491094 LUC7LQ9NQ29 371 aaKnown RBP12.27□□□□□ -0.44
VPS72-205ENST00000491094 CLIC2O15247 247 aa12.27□□□□□ -0.45
VPS72-205ENST00000491094 EIF3HO15372 352 aaKnown RBP eCLIP12.27□□□□□ -0.45
VPS72-205ENST00000491094 SLC9A1P19634 815 aa12.27□□□□□ -0.45
VPS72-205ENST00000491094 IFT88Q13099 833 aa12.27□□□□□ -0.45
VPS72-205ENST00000491094 PABPC4Q13310 644 aaKnown RBP eCLIP12.27□□□□□ -0.457e-8■□□□□ 9.4
VPS72-205ENST00000491094 ICE2Q659A1 982 aa12.27□□□□□ -0.45
VPS72-205ENST00000491094 GUF1Q8N442 669 aaKnown RBP12.27□□□□□ -0.45
VPS72-205ENST00000491094 UHMK1Q8TAS1 419 aaKnown RBP12.27□□□□□ -0.45
VPS72-205ENST00000491094 RAD54LQ92698 747 aa12.27□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms