RNA–Protein interactions for RNA: ENST00000490999.5

SCAMP3-208, Transcript of secretory carrier membrane protein 3, humanhuman

TSL 2

Gene SCAMP3, Length 1,011 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP3-208ENST00000490999 RGS22Q8NE09 1264 aa17.93■□□□□ 0.46
SCAMP3-208ENST00000490999 PPTC7Q8NI37 304 aa17.93■□□□□ 0.46
SCAMP3-208ENST00000490999 YME1L1Q96TA2 773 aa17.93■□□□□ 0.46
SCAMP3-208ENST00000490999 SALL3Q9BXA9 1300 aa17.93■□□□□ 0.46
SCAMP3-208ENST00000490999 UPP2O95045 317 aa17.92■□□□□ 0.46
SCAMP3-208ENST00000490999 GPM6BQ13491 265 aa17.92■□□□□ 0.46
SCAMP3-208ENST00000490999 ALX1Q15699 326 aa17.92■□□□□ 0.46
SCAMP3-208ENST00000490999 GPATCH4Q5T3I0 446 aaKnown RBP17.92■□□□□ 0.46
SCAMP3-208ENST00000490999 HFE2Q6ZVN8 426 aa17.92■□□□□ 0.46
SCAMP3-208ENST00000490999 EMID1Q96A84 441 aaPredicted RBP17.92■□□□□ 0.46
SCAMP3-208ENST00000490999 CLDND1Q9NY35 253 aa17.92■□□□□ 0.46
SCAMP3-208ENST00000490999 USP34Q70CQ2 3546 aa17.92■□□□□ 0.46
SCAMP3-208ENST00000490999 EMSYQ7Z589 1322 aa17.92■□□□□ 0.46
SCAMP3-208ENST00000490999 RSPH10B2B2RC85 870 aa17.91■□□□□ 0.46
SCAMP3-208ENST00000490999 DHX16O60231 1041 aaKnown RBP17.91■□□□□ 0.46
SCAMP3-208ENST00000490999 RSPH10BP0C881 870 aa17.91■□□□□ 0.46
SCAMP3-208ENST00000490999 QRICH1Q2TAL8 776 aa17.91■□□□□ 0.46
SCAMP3-208ENST00000490999 FBXO11Q86XK2 927 aa17.91■□□□□ 0.46
SCAMP3-208ENST00000490999 ADGRF4Q8IZF3 695 aa17.91■□□□□ 0.46
SCAMP3-208ENST00000490999 PABPC5Q96DU9 382 aaKnown RBP17.91■□□□□ 0.46
SCAMP3-208ENST00000490999 ZFP91Q96JP5 570 aaPredicted RBP17.91■□□□□ 0.46
SCAMP3-208ENST00000490999 PXMP2Q9NR77 195 aa17.91■□□□□ 0.46
SCAMP3-208ENST00000490999 HELLSQ9NRZ9 838 aa17.91■□□□□ 0.46
SCAMP3-208ENST00000490999 PCDHB15Q9Y5E8 787 aa17.91■□□□□ 0.46
SCAMP3-208ENST00000490999 NR3C2P08235 984 aa17.9■□□□□ 0.46
SCAMP3-208ENST00000490999 HSPD1P10809 573 aaKnown RBP17.9■□□□□ 0.46
SCAMP3-208ENST00000490999 NMIQ13287 307 aaPredicted RBP17.9■□□□□ 0.46
SCAMP3-208ENST00000490999 LAMC2Q13753 1193 aa17.9■□□□□ 0.46
SCAMP3-208ENST00000490999 PUS10Q3MIT2 529 aaKnown RBP17.9■□□□□ 0.46
SCAMP3-208ENST00000490999 HSDL1Q3SXM5 330 aa17.9■□□□□ 0.46
SCAMP3-208ENST00000490999 PLEKHG4Q58EX7 1191 aa17.9■□□□□ 0.46
SCAMP3-208ENST00000490999 MFSD6Q6ZSS7 791 aa17.9■□□□□ 0.46
SCAMP3-208ENST00000490999 SERINC5Q86VE9 423 aa17.9■□□□□ 0.46
SCAMP3-208ENST00000490999 PNMA1Q8ND90 353 aa17.9■□□□□ 0.46
SCAMP3-208ENST00000490999 IL31RAQ8NI17 732 aa17.9■□□□□ 0.46
SCAMP3-208ENST00000490999 SPATA33Q96N06 139 aa17.9■□□□□ 0.46
SCAMP3-208ENST00000490999 IWS1Q96ST2 819 aa17.9■□□□□ 0.46
SCAMP3-208ENST00000490999 NSUN3Q9H649 340 aaKnown RBP17.9■□□□□ 0.46
SCAMP3-208ENST00000490999 CTNNA3Q9UI47 895 aa17.9■□□□□ 0.46
SCAMP3-208ENST00000490999 MICAL3Q7RTP6 2002 aa17.89■□□□□ 0.46
SCAMP3-208ENST00000490999 H3BNC9 293 aa17.89■□□□□ 0.45
SCAMP3-208ENST00000490999 EIF3JO75822 258 aaKnown RBP17.89■□□□□ 0.45
SCAMP3-208ENST00000490999 RGS20O76081 388 aa17.89■□□□□ 0.45
SCAMP3-208ENST00000490999 GGPS1O95749 300 aa17.89■□□□□ 0.45
SCAMP3-208ENST00000490999 CFBP00751 764 aa17.89■□□□□ 0.45
SCAMP3-208ENST00000490999 MYCLP12524 364 aaPredicted RBP17.89■□□□□ 0.45
SCAMP3-208ENST00000490999 HOXD8P13378 290 aaPredicted RBP17.89■□□□□ 0.45
SCAMP3-208ENST00000490999 UBA1P22314 1058 aaKnown RBP17.89■□□□□ 0.45
SCAMP3-208ENST00000490999 RPAINQ86UA6 219 aa17.89■□□□□ 0.45
SCAMP3-208ENST00000490999 MCF2L2Q86YR7 1114 aa17.89■□□□□ 0.45
SCAMP3-208ENST00000490999 TMEM192Q8IY95 271 aa17.89■□□□□ 0.45
SCAMP3-208ENST00000490999 GPKOWQ92917 476 aaPredicted RBP eCLIP17.89■□□□□ 0.45
SCAMP3-208ENST00000490999 EVI5LQ96CN4 794 aa17.89■□□□□ 0.45
SCAMP3-208ENST00000490999 TTC14Q96N46 770 aa17.89■□□□□ 0.45
SCAMP3-208ENST00000490999 VAT1LQ9HCJ6 419 aa17.89■□□□□ 0.45
SCAMP3-208ENST00000490999 MUTYHQ9UIF7 546 aa17.89■□□□□ 0.45
SCAMP3-208ENST00000490999 ZMYM6O95789 1325 aa17.89■□□□□ 0.45
SCAMP3-208ENST00000490999 KIAA1217Q5T5P2 1943 aa17.88■□□□□ 0.45
SCAMP3-208ENST00000490999 COL4A6Q14031 1691 aa17.88■□□□□ 0.45
SCAMP3-208ENST00000490999 LOC101059915A0A1B0GWI6 518 aaPredicted RBP17.88■□□□□ 0.45
SCAMP3-208ENST00000490999 POTEB3A0JP26 581 aa17.88■□□□□ 0.45
SCAMP3-208ENST00000490999 C17orf102A2RUQ5 167 aa17.88■□□□□ 0.45
SCAMP3-208ENST00000490999 OPLAHO14841 1288 aa17.88■□□□□ 0.45
SCAMP3-208ENST00000490999 CTNNB1P35222 781 aa17.88■□□□□ 0.45
SCAMP3-208ENST00000490999 IRS1P35568 1242 aa17.88■□□□□ 0.45
SCAMP3-208ENST00000490999 MCMDC2Q4G0Z9 681 aa17.88■□□□□ 0.45
SCAMP3-208ENST00000490999 POTEBQ6S5H4 581 aa17.88■□□□□ 0.45
SCAMP3-208ENST00000490999 ADHFE1Q8IWW8 467 aa17.88■□□□□ 0.45
SCAMP3-208ENST00000490999 SEPT8Q92599 483 aa17.88■□□□□ 0.45
SCAMP3-208ENST00000490999 ATP6V0A1Q93050 837 aa17.88■□□□□ 0.45
SCAMP3-208ENST00000490999 SAMD11Q96NU1 681 aa17.88■□□□□ 0.45
SCAMP3-208ENST00000490999 PHOX2BQ99453 314 aa17.88■□□□□ 0.45
SCAMP3-208ENST00000490999 IFIH1Q9BYX4 1025 aaKnown RBP17.88■□□□□ 0.45
SCAMP3-208ENST00000490999 TREHO43280 583 aa17.87■□□□□ 0.45
SCAMP3-208ENST00000490999 SMIM10L2AP0DMW4 78 aa17.87■□□□□ 0.45
SCAMP3-208ENST00000490999 SMIM10L2BP0DMW5 78 aa17.87■□□□□ 0.45
SCAMP3-208ENST00000490999 HOXA13P31271 388 aaPredicted RBP17.87■□□□□ 0.45
SCAMP3-208ENST00000490999 LTBRP36941 435 aa17.87■□□□□ 0.45
SCAMP3-208ENST00000490999 SP2Q02086 613 aa17.87■□□□□ 0.45
SCAMP3-208ENST00000490999 DLX2Q07687 328 aaPredicted RBP17.87■□□□□ 0.45
SCAMP3-208ENST00000490999 COL19A1Q14993 1142 aa17.87■□□□□ 0.45
SCAMP3-208ENST00000490999 CELF3Q5SZQ8 465 aaKnown RBP17.87■□□□□ 0.45
SCAMP3-208ENST00000490999 MYSM1Q5VVJ2 828 aa17.87■□□□□ 0.45
SCAMP3-208ENST00000490999 ESR2Q92731 530 aa17.87■□□□□ 0.45
SCAMP3-208ENST00000490999 C16orf70Q9BSU1 422 aa17.87■□□□□ 0.45
SCAMP3-208ENST00000490999 KAT14Q9H8E8 782 aa17.87■□□□□ 0.45
SCAMP3-208ENST00000490999 JMJD4Q9H9V9 463 aa17.87■□□□□ 0.45
SCAMP3-208ENST00000490999 MRPL11Q9Y3B7 192 aaKnown RBP17.87■□□□□ 0.45
SCAMP3-208ENST00000490999 CCDC171Q6TFL3 1326 aa17.87■□□□□ 0.45
SCAMP3-208ENST00000490999 ZNF318Q5VUA4 2279 aa17.86■□□□□ 0.45
SCAMP3-208ENST00000490999 C19orf67A6NJJ6 358 aa17.86■□□□□ 0.45
SCAMP3-208ENST00000490999 KDM4AO75164 1064 aa17.86■□□□□ 0.45
SCAMP3-208ENST00000490999 TOP1MTQ969P6 601 aa17.86■□□□□ 0.45
SCAMP3-208ENST00000490999 PDCD2LQ9BRP1 358 aa17.86■□□□□ 0.45
SCAMP3-208ENST00000490999 BCAS3Q9H6U6 928 aa17.86■□□□□ 0.45
SCAMP3-208ENST00000490999 FAM50BQ9Y247 325 aa17.86■□□□□ 0.45
SCAMP3-208ENST00000490999 PPP1R11O60927 126 aaPredicted RBP17.85■□□□□ 0.45
SCAMP3-208ENST00000490999 LGALS2P05162 132 aa17.85■□□□□ 0.45
SCAMP3-208ENST00000490999 GTF2F1P35269 517 aaKnown RBP eCLIP17.85■□□□□ 0.45
SCAMP3-208ENST00000490999 HSD17B4P51659 736 aa17.85■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 77.2 ms