RNA–Protein interactions for RNA: ENST00000490716.5

SUPT20H-220, Transcript of SPT20 homolog, SAGA complex component, humanhuman

TSL 5

Gene SUPT20H, Length 3,811 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT20H-220ENST00000490716 CABYRO75952 493 aa10.59□□□□□ -0.71
SUPT20H-220ENST00000490716 STBD1O95210 358 aa10.59□□□□□ -0.71
SUPT20H-220ENST00000490716 FAM86B2P0C5J1 330 aa10.59□□□□□ -0.71
SUPT20H-220ENST00000490716 METAP2P50579 478 aaKnown RBP eCLIP10.59□□□□□ -0.71
SUPT20H-220ENST00000490716 FXR1P51114 621 aaKnown RBP eCLIP10.59□□□□□ -0.71
SUPT20H-220ENST00000490716 AP3B2Q13367 1082 aa10.59□□□□□ -0.71
SUPT20H-220ENST00000490716 RNF180Q86T96 592 aa10.59□□□□□ -0.71
SUPT20H-220ENST00000490716 NSUN7Q8NE18 718 aaKnown RBP10.59□□□□□ -0.71
SUPT20H-220ENST00000490716 HTATIP2Q9BUP3 242 aa10.59□□□□□ -0.71
SUPT20H-220ENST00000490716 WNT8AQ9H1J5 351 aa10.59□□□□□ -0.71
SUPT20H-220ENST00000490716 MTMR7Q9Y216 660 aa10.59□□□□□ -0.71
SUPT20H-220ENST00000490716 V9GY48 417 aaPredicted RBP10.59□□□□□ -0.71
SUPT20H-220ENST00000490716 MYCP01106 439 aaPredicted RBP10.58□□□□□ -0.72
SUPT20H-220ENST00000490716 EPHB4P54760 987 aa10.58□□□□□ -0.72
SUPT20H-220ENST00000490716 BEX3Q00994 111 aa10.58□□□□□ -0.72
SUPT20H-220ENST00000490716 ITGB3BPQ13352 177 aaPredicted RBP10.58□□□□□ -0.72
SUPT20H-220ENST00000490716 PCDHA6Q9UN73 950 aa10.58□□□□□ -0.72
SUPT20H-220ENST00000490716 PCDHA8Q9Y5H6 950 aa10.58□□□□□ -0.72
SUPT20H-220ENST00000490716 GOLGA8AA7E2F4 631 aa10.58□□□□□ -0.72
SUPT20H-220ENST00000490716 GOLGA8BA8MQT2 603 aa10.58□□□□□ -0.72
SUPT20H-220ENST00000490716 ZBTB42B2RXF5 422 aa10.58□□□□□ -0.72
SUPT20H-220ENST00000490716 HSDL1Q3SXM5 330 aa10.58□□□□□ -0.72
SUPT20H-220ENST00000490716 WDR78Q5VTH9 848 aa10.58□□□□□ -0.72
SUPT20H-220ENST00000490716 KCNV1Q6PIU1 500 aa10.58□□□□□ -0.72
SUPT20H-220ENST00000490716 RPAINQ86UA6 219 aa10.58□□□□□ -0.72
SUPT20H-220ENST00000490716 PCDH10Q9P2E7 1040 aa10.58□□□□□ -0.72
SUPT20H-220ENST00000490716 COLQQ9Y215 455 aaPredicted RBP10.58□□□□□ -0.72
SUPT20H-220ENST00000490716 GSTTP1A0A1W2PQM5 241 aa10.58□□□□□ -0.72
SUPT20H-220ENST00000490716 B4GALT4O60513 344 aa10.58□□□□□ -0.72
SUPT20H-220ENST00000490716 CRIPAKQ8N1N5 446 aa10.58□□□□□ -0.72
SUPT20H-220ENST00000490716 PCSK9Q8NBP7 692 aaKnown RBP10.58□□□□□ -0.72
SUPT20H-220ENST00000490716 UPF3BQ9BZI7 483 aaKnown RBP10.58□□□□□ -0.72
SUPT20H-220ENST00000490716 SENP6Q9GZR1 1112 aaPredicted RBP10.58□□□□□ -0.72
SUPT20H-220ENST00000490716 PSTPIP2Q9H939 334 aa10.58□□□□□ -0.72
SUPT20H-220ENST00000490716 PDRG1Q9NUG6 133 aa10.58□□□□□ -0.72
SUPT20H-220ENST00000490716 BIN2Q9UBW5 565 aaPredicted RBP10.58□□□□□ -0.72
SUPT20H-220ENST00000490716 IKQ13123 557 aaPredicted RBP10.57□□□□□ -0.72
SUPT20H-220ENST00000490716 UBE2SQ16763 222 aa10.57□□□□□ -0.72
SUPT20H-220ENST00000490716 MARCH8Q5T0T0 291 aa10.57□□□□□ -0.72
SUPT20H-220ENST00000490716 CYP2W1Q8TAV3 490 aa10.57□□□□□ -0.72
SUPT20H-220ENST00000490716 NUP133Q8WUM0 1156 aa10.57□□□□□ -0.72
SUPT20H-220ENST00000490716 PHKBQ93100 1093 aa10.57□□□□□ -0.72
SUPT20H-220ENST00000490716 TMEM260Q9NX78 707 aa10.57□□□□□ -0.72
SUPT20H-220ENST00000490716 EMSYQ7Z589 1322 aa10.57□□□□□ -0.72
SUPT20H-220ENST00000490716 A0A0U1RQG5 324 aaPredicted RBP10.57□□□□□ -0.72
SUPT20H-220ENST00000490716 CCND2P30279 289 aa10.57□□□□□ -0.72
SUPT20H-220ENST00000490716 TCTN1Q2MV58 587 aa10.57□□□□□ -0.72
SUPT20H-220ENST00000490716 LRIT3Q3SXY7 679 aa10.57□□□□□ -0.72
SUPT20H-220ENST00000490716 EARS2Q5JPH6 523 aaKnown RBP10.57□□□□□ -0.72
SUPT20H-220ENST00000490716 GPR153Q6NV75 609 aa10.57□□□□□ -0.72
SUPT20H-220ENST00000490716 LINC01465Q8N7H1 131 aa10.57□□□□□ -0.72
SUPT20H-220ENST00000490716 WNT8BQ93098 351 aa10.57□□□□□ -0.72
SUPT20H-220ENST00000490716 MXRA8Q9BRK3 442 aa10.57□□□□□ -0.72
SUPT20H-220ENST00000490716 BACH2Q9BYV9 841 aa10.57□□□□□ -0.72
SUPT20H-220ENST00000490716 MAFGO15525 162 aa10.57□□□□□ -0.72
SUPT20H-220ENST00000490716 KPNA6O60684 536 aa10.57□□□□□ -0.72
SUPT20H-220ENST00000490716 CFBP00751 764 aa10.57□□□□□ -0.72
SUPT20H-220ENST00000490716 EIF2AK2P19525 551 aaKnown RBP10.57□□□□□ -0.72
SUPT20H-220ENST00000490716 Q4G0T1 1027 aa10.57□□□□□ -0.72
SUPT20H-220ENST00000490716 MOXD1Q6UVY6 613 aa10.57□□□□□ -0.72
SUPT20H-220ENST00000490716 CCAR1Q8IX12 1150 aaKnown RBP10.57□□□□□ -0.72
SUPT20H-220ENST00000490716 ETNPPLQ8TBG4 499 aa10.57□□□□□ -0.72
SUPT20H-220ENST00000490716 AFAP1L1Q8TED9 768 aa10.57□□□□□ -0.72
SUPT20H-220ENST00000490716 ZHX1Q9UKY1 873 aaPredicted RBP10.57□□□□□ -0.72
SUPT20H-220ENST00000490716 SLC34A2O95436 690 aa10.56□□□□□ -0.72
SUPT20H-220ENST00000490716 PDE4DQ08499 809 aa10.56□□□□□ -0.72
SUPT20H-220ENST00000490716 AIFM3Q96NN9 605 aa10.56□□□□□ -0.72
SUPT20H-220ENST00000490716 AGO4Q9HCK5 861 aaKnown RBP10.56□□□□□ -0.72
SUPT20H-220ENST00000490716 MBLAC1A4D2B0 266 aaPredicted RBP10.56□□□□□ -0.72
SUPT20H-220ENST00000490716 SOX1O00570 391 aaPredicted RBP10.56□□□□□ -0.72
SUPT20H-220ENST00000490716 FIBPO43427 364 aa10.56□□□□□ -0.72
SUPT20H-220ENST00000490716 TIMP1P01033 207 aa10.56□□□□□ -0.72
SUPT20H-220ENST00000490716 MAGEA10P43363 369 aaPredicted RBP10.56□□□□□ -0.72
SUPT20H-220ENST00000490716 SPIRE1Q08AE8 756 aa10.56□□□□□ -0.72
SUPT20H-220ENST00000490716 TTLL4Q14679 1199 aa10.56□□□□□ -0.72
SUPT20H-220ENST00000490716 FAM26DQ5JW98 314 aa10.56□□□□□ -0.72
SUPT20H-220ENST00000490716 ARHGEF16Q5VV41 709 aa10.56□□□□□ -0.72
SUPT20H-220ENST00000490716 HOMER1Q86YM7 354 aa10.56□□□□□ -0.72
SUPT20H-220ENST00000490716 NOC4LQ9BVI4 516 aaKnown RBP10.56□□□□□ -0.72
SUPT20H-220ENST00000490716 EVPLQ92817 2033 aa10.56□□□□□ -0.72
SUPT20H-220ENST00000490716 PDCD11Q14690 1871 aaKnown RBP10.56□□□□□ -0.72
SUPT20H-220ENST00000490716 KAT6AQ92794 2004 aa10.56□□□□□ -0.72
SUPT20H-220ENST00000490716 ATP4AP20648 1035 aa10.56□□□□□ -0.72
SUPT20H-220ENST00000490716 CPT1AP50416 773 aa10.56□□□□□ -0.72
SUPT20H-220ENST00000490716 METTL7BQ6UX53 244 aa10.56□□□□□ -0.72
SUPT20H-220ENST00000490716 CUL5Q93034 780 aa10.56□□□□□ -0.72
SUPT20H-220ENST00000490716 CCDC196A0A1B0GTZ2 297 aa10.55□□□□□ -0.72
SUPT20H-220ENST00000490716 KBTBD13C9JR72 458 aa10.55□□□□□ -0.72
SUPT20H-220ENST00000490716 WNT7AO00755 349 aa10.55□□□□□ -0.72
SUPT20H-220ENST00000490716 GH1P01241 217 aa10.55□□□□□ -0.72
SUPT20H-220ENST00000490716 CXCL10P02778 98 aa10.55□□□□□ -0.72
SUPT20H-220ENST00000490716 TXNP10599 105 aaKnown RBP10.55□□□□□ -0.72
SUPT20H-220ENST00000490716 MGAT3Q09327 533 aa10.55□□□□□ -0.72
SUPT20H-220ENST00000490716 LAMC2Q13753 1193 aa10.55□□□□□ -0.72
SUPT20H-220ENST00000490716 HABP4Q5JVS0 413 aaKnown RBP10.55□□□□□ -0.72
SUPT20H-220ENST00000490716 CCNE2O96020 404 aa10.55□□□□□ -0.72
SUPT20H-220ENST00000490716 ITGA7Q13683 1181 aa10.55□□□□□ -0.72
SUPT20H-220ENST00000490716 SAMD1Q6SPF0 538 aaPredicted RBP10.55□□□□□ -0.72
SUPT20H-220ENST00000490716 ANO3Q9BYT9 981 aa10.55□□□□□ -0.72
SUPT20H-220ENST00000490716 KCNMB3Q9NPA1 279 aa10.55□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms