RNA–Protein interactions for RNA: ENST00000489692.1

GGPS1-207, Transcript of geranylgeranyl diphosphate synthase 1, humanhuman

TSL 3

Gene GGPS1, Length 506 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1-207ENST00000489692 SZT2Q5T011 3432 aa13.51□□□□□ -0.25
GGPS1-207ENST00000489692 A6NJR5 290 aa13.5□□□□□ -0.25
GGPS1-207ENST00000489692 SH2B2O14492 632 aaPredicted RBP13.5□□□□□ -0.25
GGPS1-207ENST00000489692 OPLAHO14841 1288 aa13.5□□□□□ -0.25
GGPS1-207ENST00000489692 CYTH3O43739 400 aa13.5□□□□□ -0.25
GGPS1-207ENST00000489692 MMP3P08254 477 aa13.5□□□□□ -0.25
GGPS1-207ENST00000489692 HMGB1P09429 215 aaKnown RBP13.5□□□□□ -0.25
GGPS1-207ENST00000489692 CCND2P30279 289 aa13.5□□□□□ -0.25
GGPS1-207ENST00000489692 DGKDQ16760 1214 aa13.5□□□□□ -0.25
GGPS1-207ENST00000489692 SLC35G1Q2M3R5 365 aa13.5□□□□□ -0.25
GGPS1-207ENST00000489692 TMEM240Q5SV17 173 aa13.5□□□□□ -0.25
GGPS1-207ENST00000489692 CCDC62Q6P9F0 684 aa13.5□□□□□ -0.25
GGPS1-207ENST00000489692 OTOP2Q7RTS6 562 aa13.5□□□□□ -0.25
GGPS1-207ENST00000489692 RPUSD2Q8IZ73 545 aaKnown RBP13.5□□□□□ -0.25
GGPS1-207ENST00000489692 SMARCC2Q8TAQ2 1214 aa13.5□□□□□ -0.25
GGPS1-207ENST00000489692 SCLYQ96I15 445 aa13.5□□□□□ -0.25
GGPS1-207ENST00000489692 LZTS2Q9BRK4 669 aa13.5□□□□□ -0.25
GGPS1-207ENST00000489692 PDCD2LQ9BRP1 358 aa13.5□□□□□ -0.25
GGPS1-207ENST00000489692 ALG1Q9BT22 464 aa13.5□□□□□ -0.25
GGPS1-207ENST00000489692 SEMA6BQ9H3T3 888 aa13.5□□□□□ -0.25
GGPS1-207ENST00000489692 NAP1L2Q9ULW6 460 aaPredicted RBP13.5□□□□□ -0.25
GGPS1-207ENST00000489692 PLEKHA8P1O95397 391 aa13.49□□□□□ -0.25
GGPS1-207ENST00000489692 LARGE1O95461 756 aa13.49□□□□□ -0.25
GGPS1-207ENST00000489692 CALM1P0DP23 149 aa13.49□□□□□ -0.25
GGPS1-207ENST00000489692 CALM2P0DP24 149 aa13.49□□□□□ -0.25
GGPS1-207ENST00000489692 CALM3P0DP25 149 aa13.49□□□□□ -0.25
GGPS1-207ENST00000489692 ZSCAN22P10073 491 aaPredicted RBP13.49□□□□□ -0.25
GGPS1-207ENST00000489692 CPA1P15085 419 aa13.49□□□□□ -0.25
GGPS1-207ENST00000489692 DNAJB2P25686 324 aa13.49□□□□□ -0.25
GGPS1-207ENST00000489692 ZNF445P59923 1031 aa13.49□□□□□ -0.25
GGPS1-207ENST00000489692 FGD1P98174 961 aa13.49□□□□□ -0.25
GGPS1-207ENST00000489692 ARHGAP1Q07960 439 aa13.49□□□□□ -0.25
GGPS1-207ENST00000489692 LAMC2Q13753 1193 aa13.49□□□□□ -0.25
GGPS1-207ENST00000489692 PGM5Q15124 567 aa13.49□□□□□ -0.25
GGPS1-207ENST00000489692 C16orf59Q7L2K0 433 aa13.49□□□□□ -0.25
GGPS1-207ENST00000489692 DEFB128Q7Z7B8 93 aa13.49□□□□□ -0.25
GGPS1-207ENST00000489692 MICU3Q86XE3 530 aa13.49□□□□□ -0.25
GGPS1-207ENST00000489692 CCDC82Q8N4S0 544 aa13.49□□□□□ -0.25
GGPS1-207ENST00000489692 SAMD3Q8N6K7 520 aa13.49□□□□□ -0.25
GGPS1-207ENST00000489692 TMEM87AQ8NBN3 555 aa13.49□□□□□ -0.25
GGPS1-207ENST00000489692 SPATA33Q96N06 139 aa13.49□□□□□ -0.25
GGPS1-207ENST00000489692 GUCD1Q96NT3 240 aa13.49□□□□□ -0.25
GGPS1-207ENST00000489692 CDX2Q99626 313 aaPredicted RBP13.49□□□□□ -0.25
GGPS1-207ENST00000489692 FTOQ9C0B1 505 aaKnown RBP eCLIP13.49□□□□□ -0.25
GGPS1-207ENST00000489692 GZF1Q9H116 711 aaPredicted RBP13.49□□□□□ -0.25
GGPS1-207ENST00000489692 MLXIPQ9HAP2 919 aa13.49□□□□□ -0.25
GGPS1-207ENST00000489692 DDX41Q9UJV9 622 aaKnown RBP13.49□□□□□ -0.25
GGPS1-207ENST00000489692 ATP6V1DQ9Y5K8 247 aa13.49□□□□□ -0.25
GGPS1-207ENST00000489692 MYH15Q9Y2K3 1946 aa13.49□□□□□ -0.25
GGPS1-207ENST00000489692 GRXCR1A8MXD5 290 aa13.48□□□□□ -0.25
GGPS1-207ENST00000489692 GGPS1O95749 300 aa13.48□□□□□ -0.25
GGPS1-207ENST00000489692 PTGISQ16647 500 aa13.48□□□□□ -0.25
GGPS1-207ENST00000489692 ME3Q16798 604 aa13.48□□□□□ -0.25
GGPS1-207ENST00000489692 GNPTABQ3T906 1256 aa13.48□□□□□ -0.25
GGPS1-207ENST00000489692 NFRKBQ6P4R8 1299 aa13.48□□□□□ -0.25
GGPS1-207ENST00000489692 KCNV1Q6PIU1 500 aa13.48□□□□□ -0.25
GGPS1-207ENST00000489692 CCDC83Q8IWF9 413 aa13.48□□□□□ -0.25
GGPS1-207ENST00000489692 CMTR1Q8N1G2 835 aaKnown RBP13.48□□□□□ -0.25
GGPS1-207ENST00000489692 C7orf31Q8N865 590 aa13.48□□□□□ -0.25
GGPS1-207ENST00000489692 IL31RAQ8NI17 732 aa13.48□□□□□ -0.25
GGPS1-207ENST00000489692 MYLIPQ8WY64 445 aa13.48□□□□□ -0.25
GGPS1-207ENST00000489692 TIFAQ96CG3 184 aa13.48□□□□□ -0.25
GGPS1-207ENST00000489692 NEK1Q96PY6 1258 aa13.48□□□□□ -0.25
GGPS1-207ENST00000489692 MTA3Q9BTC8 594 aa13.48□□□□□ -0.25
GGPS1-207ENST00000489692 SPZ1Q9BXG8 430 aa13.48□□□□□ -0.25
GGPS1-207ENST00000489692 WNT8AQ9H1J5 351 aa13.48□□□□□ -0.25
GGPS1-207ENST00000489692 MSRAQ9UJ68 235 aa13.48□□□□□ -0.25
GGPS1-207ENST00000489692 NOP56O00567 594 aaKnown RBP13.47□□□□□ -0.25
GGPS1-207ENST00000489692 STX6O43752 255 aa13.47□□□□□ -0.25
GGPS1-207ENST00000489692 ZNF286BP0CG31 522 aa13.47□□□□□ -0.25
GGPS1-207ENST00000489692 FOSL2P15408 326 aa13.47□□□□□ -0.25
GGPS1-207ENST00000489692 PDCP20941 246 aa13.47□□□□□ -0.25
GGPS1-207ENST00000489692 PTPN11Q06124 597 aaPredicted RBP13.47□□□□□ -0.25
GGPS1-207ENST00000489692 ST3GAL1Q11201 340 aa13.47□□□□□ -0.25
GGPS1-207ENST00000489692 BFSP2Q13515 415 aa13.47□□□□□ -0.25
GGPS1-207ENST00000489692 TOB2Q14106 344 aaPredicted RBP13.47□□□□□ -0.25
GGPS1-207ENST00000489692 VSIG10LQ86VR7 867 aa13.47□□□□□ -0.25
GGPS1-207ENST00000489692 CCDC155Q8N6L0 562 aa13.47□□□□□ -0.25
GGPS1-207ENST00000489692 MAP3K14Q99558 947 aa13.47□□□□□ -0.25
GGPS1-207ENST00000489692 KATNAL1Q9BW62 490 aa13.47□□□□□ -0.25
GGPS1-207ENST00000489692 RTEL1Q9NZ71 1219 aa13.47□□□□□ -0.25
GGPS1-207ENST00000489692 TPCN1Q9ULQ1 816 aa13.47□□□□□ -0.25
GGPS1-207ENST00000489692 SLC4A7Q9Y6M7 1214 aa13.47□□□□□ -0.25
GGPS1-207ENST00000489692 hCG_1642624A0A1W2PR95 340 aa13.46□□□□□ -0.25
GGPS1-207ENST00000489692 PRPF40AO75400 957 aaKnown RBP13.46□□□□□ -0.25
GGPS1-207ENST00000489692 F13A1P00488 732 aa13.46□□□□□ -0.25
GGPS1-207ENST00000489692 ACTN1P12814 892 aa13.46□□□□□ -0.25
GGPS1-207ENST00000489692 SYT1P21579 422 aa13.46□□□□□ -0.25
GGPS1-207ENST00000489692 LIFRP42702 1097 aa13.46□□□□□ -0.25
GGPS1-207ENST00000489692 PSEN2P49810 448 aa13.46□□□□□ -0.25
GGPS1-207ENST00000489692 GHRHRQ02643 423 aa13.46□□□□□ -0.25
GGPS1-207ENST00000489692 MFSD10Q14728 455 aa13.46□□□□□ -0.25
GGPS1-207ENST00000489692 USP17L6PQ6QN14 398 aa13.46□□□□□ -0.25
GGPS1-207ENST00000489692 HEATR3Q7Z4Q2 680 aa13.46□□□□□ -0.25
GGPS1-207ENST00000489692 SRBD1Q8N5C6 995 aaKnown RBP13.46□□□□□ -0.25
GGPS1-207ENST00000489692 PPTC7Q8NI37 304 aa13.46□□□□□ -0.25
GGPS1-207ENST00000489692 HERVK_113Q902F9 699 aa13.46□□□□□ -0.25
GGPS1-207ENST00000489692 TCEANC2Q96MN5 208 aa13.46□□□□□ -0.25
GGPS1-207ENST00000489692 TTYH1Q9H313 450 aaPredicted RBP13.46□□□□□ -0.25
GGPS1-207ENST00000489692 GRPEL1Q9HAV7 217 aa13.46□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms