RNA–Protein interactions for RNA: ENST00000489676.1

TFF3-203, Transcript of trefoil factor 3, humanhuman

TSL 2

Gene TFF3, Length 419 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TFF3-203ENST00000489676 HMGCRP04035 888 aa12.37□□□□□ -0.43
TFF3-203ENST00000489676 ZNF865P0CJ78 1059 aaPredicted RBP12.37□□□□□ -0.43
TFF3-203ENST00000489676 ARP10275 920 aa12.37□□□□□ -0.43
TFF3-203ENST00000489676 ELNP15502 786 aa12.37□□□□□ -0.43
TFF3-203ENST00000489676 ATP2B1P20020 1258 aa12.37□□□□□ -0.43
TFF3-203ENST00000489676 MCM7P33993 719 aa12.37□□□□□ -0.43
TFF3-203ENST00000489676 ATP2C1P98194 919 aaPredicted RBP12.37□□□□□ -0.43
TFF3-203ENST00000489676 TRIM32Q13049 653 aa12.37□□□□□ -0.43
TFF3-203ENST00000489676 FOXD4L6Q3SYB3 417 aaPredicted RBP12.37□□□□□ -0.43
TFF3-203ENST00000489676 GNPTABQ3T906 1256 aa12.37□□□□□ -0.43
TFF3-203ENST00000489676 PRR16Q569H4 304 aa12.37□□□□□ -0.43
TFF3-203ENST00000489676 ANO1Q5XXA6 986 aa12.37□□□□□ -0.43
TFF3-203ENST00000489676 ATL3Q6DD88 541 aa12.37□□□□□ -0.43
TFF3-203ENST00000489676 CCDC62Q6P9F0 684 aa12.37□□□□□ -0.43
TFF3-203ENST00000489676 FOXD4L3Q6VB84 417 aaPredicted RBP12.37□□□□□ -0.43
TFF3-203ENST00000489676 CTU1Q7Z7A3 348 aaKnown RBP12.37□□□□□ -0.43
TFF3-203ENST00000489676 PLA2G4DQ86XP0 818 aa12.37□□□□□ -0.43
TFF3-203ENST00000489676 SLAIN1Q8ND83 568 aa12.37□□□□□ -0.43
TFF3-203ENST00000489676 TRPV1Q8NER1 839 aa12.37□□□□□ -0.43
TFF3-203ENST00000489676 TNPO1Q92973 898 aaKnown RBP12.37□□□□□ -0.43
TFF3-203ENST00000489676 MTMR9Q96QG7 549 aa12.37□□□□□ -0.43
TFF3-203ENST00000489676 ABHD16BQ9H3Z7 469 aa12.37□□□□□ -0.43
TFF3-203ENST00000489676 KCNH7Q9NS40 1196 aa12.37□□□□□ -0.43
TFF3-203ENST00000489676 RTEL1Q9NZ71 1219 aa12.37□□□□□ -0.43
TFF3-203ENST00000489676 NRBP1Q9UHY1 535 aa12.37□□□□□ -0.43
TFF3-203ENST00000489676 ATP6V1DQ9Y5K8 247 aa12.37□□□□□ -0.43
TFF3-203ENST00000489676 TNRC18O15417 2968 aaPredicted RBP12.37□□□□□ -0.43
TFF3-203ENST00000489676 FRMPD3Q5JV73 1810 aa12.37□□□□□ -0.43
TFF3-203ENST00000489676 SPATA31C2B4DYI2 1134 aa12.36□□□□□ -0.43
TFF3-203ENST00000489676 TBX3O15119 743 aa12.36□□□□□ -0.43
TFF3-203ENST00000489676 MSH4O15457 936 aa12.36□□□□□ -0.43
TFF3-203ENST00000489676 ADCY6O43306 1168 aa12.36□□□□□ -0.43
TFF3-203ENST00000489676 YEATS4O95619 227 aa12.36□□□□□ -0.43
TFF3-203ENST00000489676 KCNA2P16389 499 aa12.36□□□□□ -0.43
TFF3-203ENST00000489676 ITGB3BPQ13352 177 aaPredicted RBP12.36□□□□□ -0.43
TFF3-203ENST00000489676 MTMR1Q13613 665 aa12.36□□□□□ -0.43
TFF3-203ENST00000489676 ACVR2BQ13705 512 aa12.36□□□□□ -0.43
TFF3-203ENST00000489676 SF3A1Q15459 793 aaKnown RBP12.36□□□□□ -0.43
TFF3-203ENST00000489676 ZNF174Q15697 407 aa12.36□□□□□ -0.43
TFF3-203ENST00000489676 MFSD14CQ5VZR4 134 aa12.36□□□□□ -0.43
TFF3-203ENST00000489676 CLEC17AQ6ZS10 378 aa12.36□□□□□ -0.43
TFF3-203ENST00000489676 EEPD1Q7L9B9 569 aa12.36□□□□□ -0.43
TFF3-203ENST00000489676 RAET1EQ8TD07 263 aa12.36□□□□□ -0.43
TFF3-203ENST00000489676 SCFD2Q8WU76 684 aa12.36□□□□□ -0.43
TFF3-203ENST00000489676 HAS1Q92839 578 aa12.36□□□□□ -0.43
TFF3-203ENST00000489676 SLC5A5Q92911 643 aa12.36□□□□□ -0.43
TFF3-203ENST00000489676 ZNF396Q96N95 335 aaPredicted RBP12.36□□□□□ -0.43
TFF3-203ENST00000489676 PDGFCQ9NRA1 345 aa12.36□□□□□ -0.43
TFF3-203ENST00000489676 MAFGO15525 162 aa12.35□□□□□ -0.43
TFF3-203ENST00000489676 DHX15O43143 795 aaKnown RBP12.35□□□□□ -0.43
TFF3-203ENST00000489676 ATP9AO75110 1047 aa12.35□□□□□ -0.43
TFF3-203ENST00000489676 BMP15O95972 392 aa12.35□□□□□ -0.43
TFF3-203ENST00000489676 OR52Z1P0C646 297 aa12.35□□□□□ -0.43
TFF3-203ENST00000489676 UBA1P22314 1058 aaKnown RBP12.35□□□□□ -0.43
TFF3-203ENST00000489676 GRK4P32298 578 aa12.35□□□□□ -0.43
TFF3-203ENST00000489676 ZNF76P36508 570 aa12.35□□□□□ -0.43
TFF3-203ENST00000489676 PRPHP41219 470 aa12.35□□□□□ -0.43
TFF3-203ENST00000489676 SP2Q02086 613 aa12.35□□□□□ -0.43
TFF3-203ENST00000489676 CACNB2Q08289 660 aaPredicted RBP12.35□□□□□ -0.43
TFF3-203ENST00000489676 SPIRE1Q08AE8 756 aa12.35□□□□□ -0.43
TFF3-203ENST00000489676 PTGDRQ13258 359 aa12.35□□□□□ -0.43
TFF3-203ENST00000489676 SLC39A14Q15043 492 aa12.35□□□□□ -0.43
TFF3-203ENST00000489676 CALCRLQ16602 461 aa12.35□□□□□ -0.43
TFF3-203ENST00000489676 PRAMEF19Q5SWL8 479 aa12.35□□□□□ -0.43
TFF3-203ENST00000489676 TMEM63BQ5T3F8 832 aa12.35□□□□□ -0.43
TFF3-203ENST00000489676 SEPT14Q6ZU15 432 aa12.35□□□□□ -0.43
TFF3-203ENST00000489676 NLRX1Q86UT6 975 aa12.35□□□□□ -0.43
TFF3-203ENST00000489676 LINC00301Q8NCQ3 95 aa12.35□□□□□ -0.43
TFF3-203ENST00000489676 CDHR1Q96JP9 859 aa12.35□□□□□ -0.43
TFF3-203ENST00000489676 FAM20AQ96MK3 541 aa12.35□□□□□ -0.43
TFF3-203ENST00000489676 AGO4Q9HCK5 861 aaKnown RBP12.35□□□□□ -0.43
TFF3-203ENST00000489676 CNPY2Q9Y2B0 182 aa12.35□□□□□ -0.43
TFF3-203ENST00000489676 MRVI1Q9Y6F6 885 aa12.35□□□□□ -0.43
TFF3-203ENST00000489676 C11orf97A0A1B0GVM6 126 aaPredicted RBP12.34□□□□□ -0.43
TFF3-203ENST00000489676 IPO5O00410 1097 aaKnown RBP12.34□□□□□ -0.43
TFF3-203ENST00000489676 LAD1O00515 517 aa12.34□□□□□ -0.43
TFF3-203ENST00000489676 PSMD10O75832 226 aa12.34□□□□□ -0.43
TFF3-203ENST00000489676 INHAP05111 366 aa12.34□□□□□ -0.43
TFF3-203ENST00000489676 TGFB3P10600 412 aa12.34□□□□□ -0.43
TFF3-203ENST00000489676 PRKAR2AP13861 404 aaKnown RBP12.34□□□□□ -0.43
TFF3-203ENST00000489676 ADCYAP1R1P41586 468 aa12.34□□□□□ -0.43
TFF3-203ENST00000489676 KRT85P78386 507 aa12.34□□□□□ -0.43
TFF3-203ENST00000489676 CCDC144BQ3MJ40 725 aa12.34□□□□□ -0.43
TFF3-203ENST00000489676 KCNV1Q6PIU1 500 aa12.34□□□□□ -0.43
TFF3-203ENST00000489676 FBXO46Q6PJ61 603 aaPredicted RBP12.34□□□□□ -0.43
TFF3-203ENST00000489676 B3GNT9Q6UX72 402 aa12.34□□□□□ -0.43
TFF3-203ENST00000489676 LEO1Q8WVC0 666 aaPredicted RBP12.34□□□□□ -0.43
TFF3-203ENST00000489676 GJA10Q969M2 543 aa12.34□□□□□ -0.43
TFF3-203ENST00000489676 SENP7Q9BQF6 1050 aa12.34□□□□□ -0.43
TFF3-203ENST00000489676 TFIP11Q9UBB9 837 aaKnown RBP12.34□□□□□ -0.43
TFF3-203ENST00000489676 DDX41Q9UJV9 622 aaKnown RBP12.34□□□□□ -0.43
TFF3-203ENST00000489676 VAV3Q9UKW4 847 aa12.34□□□□□ -0.43
TFF3-203ENST00000489676 ZHX1Q9UKY1 873 aaPredicted RBP12.34□□□□□ -0.43
TFF3-203ENST00000489676 NFASCO94856 1347 aa12.34□□□□□ -0.43
TFF3-203ENST00000489676 POTEFA5A3E0 1075 aa12.33□□□□□ -0.44
TFF3-203ENST00000489676 SMPD1P17405 629 aa12.33□□□□□ -0.44
TFF3-203ENST00000489676 PTGS1P23219 599 aa12.33□□□□□ -0.44
TFF3-203ENST00000489676 CEBPZQ03701 1054 aaKnown RBP12.33□□□□□ -0.44
TFF3-203ENST00000489676 TTLL4Q14679 1199 aa12.33□□□□□ -0.44
TFF3-203ENST00000489676 IL17AQ16552 155 aa12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms