RNA–Protein interactions for RNA: ENST00000489402.1

SNX17-207, Transcript of sorting nexin 17, humanhuman

TSL 2

Gene SNX17, Length 743 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-207ENST00000489402 HDAC6Q9UBN7 1215 aa10.89□□□□□ -0.67
SNX17-207ENST00000489402 DDX41Q9UJV9 622 aaKnown RBP10.89□□□□□ -0.67
SNX17-207ENST00000489402 COG5Q9UP83 839 aa10.89□□□□□ -0.67
SNX17-207ENST00000489402 BDP1A6H8Y1 2624 aa10.88□□□□□ -0.67
SNX17-207ENST00000489402 ABHD14A-ACY1A0A1B0GW23 586 aa10.88□□□□□ -0.67
SNX17-207ENST00000489402 KLRF2D3W0D1 207 aa10.88□□□□□ -0.67
SNX17-207ENST00000489402 ZBTB5O15062 677 aa10.88□□□□□ -0.67
SNX17-207ENST00000489402 SORBS3O60504 671 aa10.88□□□□□ -0.67
SNX17-207ENST00000489402 PPP1R11O60927 126 aaPredicted RBP10.88□□□□□ -0.67
SNX17-207ENST00000489402 ABCB7O75027 752 aa10.88□□□□□ -0.67
SNX17-207ENST00000489402 F2P00734 622 aa10.88□□□□□ -0.67
SNX17-207ENST00000489402 CKBP12277 381 aa10.88□□□□□ -0.67
SNX17-207ENST00000489402 MYCLP12524 364 aaPredicted RBP10.88□□□□□ -0.67
SNX17-207ENST00000489402 PDE4AP27815 886 aa10.88□□□□□ -0.67
SNX17-207ENST00000489402 HSD17B4P51659 736 aa10.88□□□□□ -0.67
SNX17-207ENST00000489402 TRDNQ13061 729 aa10.88□□□□□ -0.67
SNX17-207ENST00000489402 PTK7Q13308 1070 aa10.88□□□□□ -0.67
SNX17-207ENST00000489402 HIC1Q14526 733 aa10.88□□□□□ -0.67
SNX17-207ENST00000489402 SAMD3Q8N6K7 520 aa10.88□□□□□ -0.67
SNX17-207ENST00000489402 DHX38Q92620 1227 aaKnown RBP10.88□□□□□ -0.67
SNX17-207ENST00000489402 NECAB3Q96P71 396 aaPredicted RBP10.88□□□□□ -0.67
SNX17-207ENST00000489402 PCDHA1Q9Y5I3 950 aa10.88□□□□□ -0.67
SNX17-207ENST00000489402 ERICH2A1L162 156 aa10.87□□□□□ -0.67
SNX17-207ENST00000489402 HAS3O00219 553 aa10.87□□□□□ -0.67
SNX17-207ENST00000489402 PPFIA4O75335 1185 aa10.87□□□□□ -0.67
SNX17-207ENST00000489402 CXCL10P02778 98 aa10.87□□□□□ -0.67
SNX17-207ENST00000489402 BMP1P13497 986 aa10.87□□□□□ -0.67
SNX17-207ENST00000489402 KCNQ1P51787 676 aa10.87□□□□□ -0.67
SNX17-207ENST00000489402 DEFB103AP81534 67 aa10.87□□□□□ -0.67
SNX17-207ENST00000489402 GHRHRQ02643 423 aa10.87□□□□□ -0.67
SNX17-207ENST00000489402 GRB10Q13322 594 aa10.87□□□□□ -0.67
SNX17-207ENST00000489402 COL9A3Q14050 684 aaPredicted RBP10.87□□□□□ -0.67
SNX17-207ENST00000489402 IKBKEQ14164 716 aa10.87□□□□□ -0.67
SNX17-207ENST00000489402 PGM5Q15124 567 aa10.87□□□□□ -0.67
SNX17-207ENST00000489402 CYB5R4Q7L1T6 521 aa10.87□□□□□ -0.67
SNX17-207ENST00000489402 GPKOWQ92917 476 aaPredicted RBP eCLIP10.87□□□□□ -0.67
SNX17-207ENST00000489402 WNT8BQ93098 351 aa10.87□□□□□ -0.67
SNX17-207ENST00000489402 HLA-CQ95604 372 aa10.87□□□□□ -0.67
SNX17-207ENST00000489402 SPATA33Q96N06 139 aa10.87□□□□□ -0.67
SNX17-207ENST00000489402 PDCD2LQ9BRP1 358 aa10.87□□□□□ -0.67
SNX17-207ENST00000489402 C1QTNF1Q9BXJ1 281 aa10.87□□□□□ -0.67
SNX17-207ENST00000489402 OSBPL7Q9BZF2 842 aa10.87□□□□□ -0.67
SNX17-207ENST00000489402 TELO2Q9Y4R8 837 aa10.87□□□□□ -0.67
SNX17-207ENST00000489402 PRRC2BQ5JSZ5 2229 aaKnown RBP10.86□□□□□ -0.67
SNX17-207ENST00000489402 EMSYQ7Z589 1322 aa10.86□□□□□ -0.67
SNX17-207ENST00000489402 SIP14410 1827 aa10.86□□□□□ -0.67
SNX17-207ENST00000489402 LCHNA4D1U4 455 aa10.86□□□□□ -0.67
SNX17-207ENST00000489402 GCOM1H8Y6P7 765 aaPredicted RBP10.86□□□□□ -0.67
SNX17-207ENST00000489402 NBNO60934 754 aa10.86□□□□□ -0.67
SNX17-207ENST00000489402 GJB5O95377 273 aa10.86□□□□□ -0.67
SNX17-207ENST00000489402 GGPS1O95749 300 aa10.86□□□□□ -0.67
SNX17-207ENST00000489402 POLR2MP0CAP2 368 aa10.86□□□□□ -0.67
SNX17-207ENST00000489402 ATXN8OSP0DMR3 200 aa10.86□□□□□ -0.67
SNX17-207ENST00000489402 TGFB3P10600 412 aa10.86□□□□□ -0.67
SNX17-207ENST00000489402 CCND2P30279 289 aa10.86□□□□□ -0.67
SNX17-207ENST00000489402 HOXA13P31271 388 aaPredicted RBP10.86□□□□□ -0.67
SNX17-207ENST00000489402 ZNF200P98182 395 aaPredicted RBP10.86□□□□□ -0.67
SNX17-207ENST00000489402 SEC23AQ15436 765 aa10.86□□□□□ -0.67
SNX17-207ENST00000489402 CELF3Q5SZQ8 465 aaKnown RBP10.86□□□□□ -0.67
SNX17-207ENST00000489402 ZNF618Q5T7W0 954 aa10.86□□□□□ -0.67
SNX17-207ENST00000489402 MYSM1Q5VVJ2 828 aa10.86□□□□□ -0.67
SNX17-207ENST00000489402 STOX1Q6ZVD7 989 aa10.86□□□□□ -0.67
SNX17-207ENST00000489402 HOMER1Q86YM7 354 aa10.86□□□□□ -0.67
SNX17-207ENST00000489402 MTMR8Q96EF0 704 aa10.86□□□□□ -0.67
SNX17-207ENST00000489402 TGS1Q96RS0 853 aaKnown RBP10.86□□□□□ -0.67
SNX17-207ENST00000489402 RAD9AQ99638 391 aa10.86□□□□□ -0.67
SNX17-207ENST00000489402 MLXIPQ9HAP2 919 aa10.86□□□□□ -0.67
SNX17-207ENST00000489402 LMCD1Q9NZU5 365 aa10.86□□□□□ -0.67
SNX17-207ENST00000489402 MAD2L2Q9UI95 211 aa10.86□□□□□ -0.67
SNX17-207ENST00000489402 PALM3A6NDB9 673 aaPredicted RBP10.85□□□□□ -0.67
SNX17-207ENST00000489402 IFIT3O14879 490 aaKnown RBP10.85□□□□□ -0.67
SNX17-207ENST00000489402 LGR5O75473 907 aa10.85□□□□□ -0.67
SNX17-207ENST00000489402 RGS20O76081 388 aa10.85□□□□□ -0.67
SNX17-207ENST00000489402 HOXD8P13378 290 aaPredicted RBP10.85□□□□□ -0.67
SNX17-207ENST00000489402 UBA1P22314 1058 aaKnown RBP10.85□□□□□ -0.67
SNX17-207ENST00000489402 SART3Q15020 963 aaKnown RBP10.85□□□□□ -0.67
SNX17-207ENST00000489402 HSDL1Q3SXM5 330 aa10.85□□□□□ -0.67
SNX17-207ENST00000489402 RALYLQ86SE5 291 aaKnown RBP10.85□□□□□ -0.67
SNX17-207ENST00000489402 VSIG10LQ86VR7 867 aa10.85□□□□□ -0.67
SNX17-207ENST00000489402 FCHSD1Q86WN1 690 aa10.85□□□□□ -0.67
SNX17-207ENST00000489402 IL31RAQ8NI17 732 aa10.85□□□□□ -0.67
SNX17-207ENST00000489402 GDPD5Q8WTR4 605 aa10.85□□□□□ -0.67
SNX17-207ENST00000489402 RUFY2Q8WXA3 655 aa10.85□□□□□ -0.67
SNX17-207ENST00000489402 MTUS1Q9ULD2 1270 aa10.85□□□□□ -0.67
SNX17-207ENST00000489402 C17orf102A2RUQ5 167 aa10.84□□□□□ -0.67
SNX17-207ENST00000489402 LINC01553A4QN01 128 aa10.84□□□□□ -0.67
SNX17-207ENST00000489402 NOP56O00567 594 aaKnown RBP10.84□□□□□ -0.67
SNX17-207ENST00000489402 LPXNO60711 386 aa10.84□□□□□ -0.67
SNX17-207ENST00000489402 AMHP03971 560 aa10.84□□□□□ -0.67
SNX17-207ENST00000489402 GSPT1P15170 499 aaKnown RBP10.84□□□□□ -0.67
SNX17-207ENST00000489402 THPOP40225 353 aa10.84□□□□□ -0.67
SNX17-207ENST00000489402 SP2Q02086 613 aa10.84□□□□□ -0.67
SNX17-207ENST00000489402 PTH1RQ03431 593 aa10.84□□□□□ -0.67
SNX17-207ENST00000489402 GRM4Q14833 912 aa10.84□□□□□ -0.67
SNX17-207ENST00000489402 TRIM71Q2Q1W2 868 aaKnown RBP10.84□□□□□ -0.67
SNX17-207ENST00000489402 GNPTABQ3T906 1256 aa10.84□□□□□ -0.67
SNX17-207ENST00000489402 FAM117BQ6P1L5 589 aa10.84□□□□□ -0.67
SNX17-207ENST00000489402 TRAF7Q6Q0C0 670 aa10.84□□□□□ -0.67
SNX17-207ENST00000489402 PIGSQ96S52 555 aa10.84□□□□□ -0.67
SNX17-207ENST00000489402 RIOX1Q9H6W3 641 aa10.84□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms