RNA–Protein interactions for RNA: ENST00000488908.1

CCDC93-209, Transcript of coiled-coil domain containing 93, humanhuman

TSL 5

Gene CCDC93, Length 268 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC93-209ENST00000488908 TRMT2BQ96GJ1 504 aaKnown RBP4.99□□□□□ -1.61
CCDC93-209ENST00000488908 SPATA32Q96LK8 384 aa4.99□□□□□ -1.61
CCDC93-209ENST00000488908 TMEM209Q96SK2 561 aa4.99□□□□□ -1.61
CCDC93-209ENST00000488908 ZNF341Q9BYN7 854 aa4.99□□□□□ -1.61
CCDC93-209ENST00000488908 CYP26B1Q9NR63 512 aa4.99□□□□□ -1.61
CCDC93-209ENST00000488908 METTL5Q9NRN9 209 aaKnown RBP4.99□□□□□ -1.61
CCDC93-209ENST00000488908 GINM1Q9NU53 330 aa4.99□□□□□ -1.61
CCDC93-209ENST00000488908 DTLQ9NZJ0 730 aa4.99□□□□□ -1.61
CCDC93-209ENST00000488908 APEX2Q9UBZ4 518 aa4.99□□□□□ -1.61
CCDC93-209ENST00000488908 CROTQ9UKG9 612 aa4.99□□□□□ -1.61
CCDC93-209ENST00000488908 COA3Q9Y2R0 106 aaPredicted RBP4.99□□□□□ -1.61
CCDC93-209ENST00000488908 NOP56O00567 594 aaKnown RBP4.98□□□□□ -1.61
CCDC93-209ENST00000488908 MYO1BO43795 1136 aa4.98□□□□□ -1.61
CCDC93-209ENST00000488908 NAT2P11245 290 aa4.98□□□□□ -1.61
CCDC93-209ENST00000488908 PDIA4P13667 645 aaKnown RBP4.98□□□□□ -1.61
CCDC93-209ENST00000488908 FANCCQ00597 558 aa4.98□□□□□ -1.61
CCDC93-209ENST00000488908 KIAA1211LQ6NV74 962 aa4.98□□□□□ -1.61
CCDC93-209ENST00000488908 ZCCHC14Q8WYQ9 949 aaKnown RBP4.98□□□□□ -1.61
CCDC93-209ENST00000488908 APBA2Q99767 749 aa4.98□□□□□ -1.61
CCDC93-209ENST00000488908 PTPN18Q99952 460 aa4.98□□□□□ -1.61
CCDC93-209ENST00000488908 ING1Q9UK53 422 aaPredicted RBP4.98□□□□□ -1.61
CCDC93-209ENST00000488908 TIMELESSQ9UNS1 1208 aa4.98□□□□□ -1.61
CCDC93-209ENST00000488908 ZDHHC9Q9Y397 364 aa4.98□□□□□ -1.61
CCDC93-209ENST00000488908 HGSO14964 777 aaPredicted RBP4.97□□□□□ -1.61
CCDC93-209ENST00000488908 SOX9P48436 509 aa4.97□□□□□ -1.61
CCDC93-209ENST00000488908 TGFB2P61812 414 aa4.97□□□□□ -1.61
CCDC93-209ENST00000488908 NFATC3Q12968 1075 aa4.97□□□□□ -1.61
CCDC93-209ENST00000488908 PPP2R5EQ16537 467 aa4.97□□□□□ -1.61
CCDC93-209ENST00000488908 HS1BP3Q53T59 392 aa4.97□□□□□ -1.61
CCDC93-209ENST00000488908 E4F1Q66K89 784 aaPredicted RBP4.97□□□□□ -1.61
CCDC93-209ENST00000488908 GTF2IRD2BQ6EKJ0 949 aa4.97□□□□□ -1.61
CCDC93-209ENST00000488908 TRMT10BQ6PF06 316 aaKnown RBP4.97□□□□□ -1.61
CCDC93-209ENST00000488908 VHLLQ6RSH7 139 aa4.97□□□□□ -1.61
CCDC93-209ENST00000488908 TEPPQ6URK8 271 aa4.97□□□□□ -1.61
CCDC93-209ENST00000488908 GTF2IRD2Q86UP8 949 aa4.97□□□□□ -1.61
CCDC93-209ENST00000488908 Q8TCH9 128 aa4.97□□□□□ -1.61
CCDC93-209ENST00000488908 TMEM169Q96HH4 297 aa4.97□□□□□ -1.61
CCDC93-209ENST00000488908 MEGF9Q9H1U4 602 aa4.97□□□□□ -1.61
CCDC93-209ENST00000488908 EFR3BQ9Y2G0 817 aa4.97□□□□□ -1.61
CCDC93-209ENST00000488908 BCL6P41182 706 aa4.96□□□□□ -1.62
CCDC93-209ENST00000488908 ZNF143P52747 638 aaPredicted RBP4.96□□□□□ -1.62
CCDC93-209ENST00000488908 RACK1P63244 317 aaKnown RBP4.96□□□□□ -1.62
CCDC93-209ENST00000488908 FHL2Q14192 279 aa4.96□□□□□ -1.62
CCDC93-209ENST00000488908 NLRP10Q86W26 655 aa4.96□□□□□ -1.62
CCDC93-209ENST00000488908 TRIM59Q8IWR1 403 aa4.96□□□□□ -1.62
CCDC93-209ENST00000488908 ARRDC4Q8NCT1 418 aa4.96□□□□□ -1.62
CCDC93-209ENST00000488908 NPLOC4Q8TAT6 608 aa4.96□□□□□ -1.62
CCDC93-209ENST00000488908 FRS2Q8WU20 508 aa4.96□□□□□ -1.62
CCDC93-209ENST00000488908 DIO2Q92813 273 aa4.96□□□□□ -1.62
CCDC93-209ENST00000488908 NKX2-4Q9H2Z4 354 aa4.96□□□□□ -1.62
CCDC93-209ENST00000488908 DDX41Q9UJV9 622 aaKnown RBP4.96□□□□□ -1.62
CCDC93-209ENST00000488908 PCDHB4Q9Y5E5 795 aa4.96□□□□□ -1.62
CCDC93-209ENST00000488908 TCRBV5S2A0A599 114 aa4.95□□□□□ -1.62
CCDC93-209ENST00000488908 PAK2Q13177 524 aa4.95□□□□□ -1.62
CCDC93-209ENST00000488908 KCNAB2Q13303 367 aa4.95□□□□□ -1.62
CCDC93-209ENST00000488908 PRKD1Q15139 912 aaPredicted RBP4.95□□□□□ -1.62
CCDC93-209ENST00000488908 STEAP3Q658P3 488 aa4.95□□□□□ -1.62
CCDC93-209ENST00000488908 PPP1R14AQ96A00 147 aa4.95□□□□□ -1.62
CCDC93-209ENST00000488908 BACH2Q9BYV9 841 aa4.95□□□□□ -1.62
CCDC93-209ENST00000488908 ADAM29Q9UKF5 820 aa4.95□□□□□ -1.62
CCDC93-209ENST00000488908 NPIPB8E9PQR5 432 aa4.94□□□□□ -1.62
CCDC93-209ENST00000488908 LRG1P02750 347 aa4.94□□□□□ -1.62
CCDC93-209ENST00000488908 CASP7P55210 303 aa4.94□□□□□ -1.62
CCDC93-209ENST00000488908 PURAQ00577 322 aaKnown RBP4.94□□□□□ -1.62
CCDC93-209ENST00000488908 FOXE3Q13461 319 aa4.94□□□□□ -1.62
CCDC93-209ENST00000488908 EMC4Q5J8M3 183 aa4.94□□□□□ -1.62
CCDC93-209ENST00000488908 RALYLQ86SE5 291 aaKnown RBP4.94□□□□□ -1.62
CCDC93-209ENST00000488908 SEC61A2Q9H9S3 476 aa4.94□□□□□ -1.62
CCDC93-209ENST00000488908 C11orf21Q9P2W6 132 aa4.94□□□□□ -1.62
CCDC93-209ENST00000488908 H7BY64 318 aa4.93□□□□□ -1.62
CCDC93-209ENST00000488908 MEFVO15553 781 aaPredicted RBP4.93□□□□□ -1.62
CCDC93-209ENST00000488908 TADA3O75528 432 aa4.93□□□□□ -1.62
CCDC93-209ENST00000488908 ABHD18Q0P651 414 aa4.93□□□□□ -1.62
CCDC93-209ENST00000488908 MIIPQ5JXC2 388 aa4.93□□□□□ -1.62
CCDC93-209ENST00000488908 TMC5Q6UXY8 1006 aa4.93□□□□□ -1.62
CCDC93-209ENST00000488908 CCDC103Q8IW40 242 aa4.93□□□□□ -1.62
CCDC93-209ENST00000488908 ZNF654Q8IZM8 581 aa4.93□□□□□ -1.62
CCDC93-209ENST00000488908 PHOSPHO1Q8TCT1 267 aa4.93□□□□□ -1.62
CCDC93-209ENST00000488908 MRGPRX3Q96LB0 322 aa4.93□□□□□ -1.62
CCDC93-209ENST00000488908 WDR33Q9C0J8 1336 aaKnown RBP4.93□□□□□ -1.62
CCDC93-209ENST00000488908 MAFKO60675 156 aa4.92□□□□□ -1.62
CCDC93-209ENST00000488908 DGKIO75912 1065 aa4.92□□□□□ -1.62
CCDC93-209ENST00000488908 CNOT4O95628 575 aaKnown RBP4.92□□□□□ -1.62
CCDC93-209ENST00000488908 HOXC12P31275 282 aa4.92□□□□□ -1.62
CCDC93-209ENST00000488908 CYP4F3Q08477 520 aa4.92□□□□□ -1.62
CCDC93-209ENST00000488908 LSAMPQ13449 338 aa4.92□□□□□ -1.62
CCDC93-209ENST00000488908 SMN1Q16637 294 aaKnown RBP4.92□□□□□ -1.62
CCDC93-209ENST00000488908 RNF207Q6ZRF8 634 aa4.92□□□□□ -1.62
CCDC93-209ENST00000488908 NUDT10Q8NFP7 164 aa4.92□□□□□ -1.62
CCDC93-209ENST00000488908 RASGRP4Q8TDF6 673 aa4.92□□□□□ -1.62
CCDC93-209ENST00000488908 NUDT11Q96G61 164 aa4.92□□□□□ -1.62
CCDC93-209ENST00000488908 CHAMP1Q96JM3 812 aa4.92□□□□□ -1.62
CCDC93-209ENST00000488908 ADOQ96SZ5 270 aa4.92□□□□□ -1.62
CCDC93-209ENST00000488908 GZF1Q9H116 711 aaPredicted RBP4.92□□□□□ -1.62
CCDC93-209ENST00000488908 HSPBP1Q9NZL4 362 aa4.92□□□□□ -1.62
CCDC93-209ENST00000488908 MYOTQ9UBF9 498 aa4.92□□□□□ -1.62
CCDC93-209ENST00000488908 TMEFF2Q9UIK5 374 aaPredicted RBP4.92□□□□□ -1.62
CCDC93-209ENST00000488908 FOXS1O43638 330 aa4.91□□□□□ -1.62
CCDC93-209ENST00000488908 KLHL18O94889 574 aa4.91□□□□□ -1.62
CCDC93-209ENST00000488908 CPP00450 1065 aa4.91□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms