RNA–Protein interactions for RNA: ENST00000488463.5

COL9A2-208, Transcript of collagen type IX alpha 2 chain, humanhuman

TSL 5

Gene COL9A2, Length 1,005 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A2-208ENST00000488463 PHKBQ93100 1093 aa16.32■□□□□ 0.2
COL9A2-208ENST00000488463 SEZ6LQ9BYH1 1024 aa16.32■□□□□ 0.2
COL9A2-208ENST00000488463 PDRG1Q9NUG6 133 aa16.32■□□□□ 0.2
COL9A2-208ENST00000488463 TMEM39AQ9NV64 488 aa16.32■□□□□ 0.2
COL9A2-208ENST00000488463 PRKAG2Q9UGJ0 569 aa16.32■□□□□ 0.2
COL9A2-208ENST00000488463 PCDHA6Q9UN73 950 aa16.32■□□□□ 0.2
COL9A2-208ENST00000488463 PCDHA8Q9Y5H6 950 aa16.32■□□□□ 0.2
COL9A2-208ENST00000488463 GTF3C3Q9Y5Q9 886 aa16.32■□□□□ 0.2
COL9A2-208ENST00000488463 CDH23Q9H251 3354 aa16.31■□□□□ 0.2
COL9A2-208ENST00000488463 SOX1O00570 391 aaPredicted RBP16.31■□□□□ 0.2
COL9A2-208ENST00000488463 B4GALT4O60513 344 aa16.31■□□□□ 0.2
COL9A2-208ENST00000488463 KPNA6O60684 536 aa16.31■□□□□ 0.2
COL9A2-208ENST00000488463 GGPS1O95749 300 aa16.31■□□□□ 0.2
COL9A2-208ENST00000488463 ITGB5P18084 799 aa16.31■□□□□ 0.2
COL9A2-208ENST00000488463 EPHB4P54760 987 aa16.31■□□□□ 0.2
COL9A2-208ENST00000488463 CCT2P78371 535 aaKnown RBP16.31■□□□□ 0.2
COL9A2-208ENST00000488463 LAMC2Q13753 1193 aa16.31■□□□□ 0.2
COL9A2-208ENST00000488463 NBPF20Q3BBV1 942 aa16.31■□□□□ 0.2
COL9A2-208ENST00000488463 HSDL1Q3SXM5 330 aa16.31■□□□□ 0.2
COL9A2-208ENST00000488463 TDHQ8IZJ6 230 aa16.31■□□□□ 0.2
COL9A2-208ENST00000488463 RNF26Q9BY78 433 aaPredicted RBP16.31■□□□□ 0.2
COL9A2-208ENST00000488463 UBE2OQ9C0C9 1292 aaKnown RBP16.31■□□□□ 0.2
COL9A2-208ENST00000488463 TRPV6Q9H1D0 765 aa16.31■□□□□ 0.2
COL9A2-208ENST00000488463 RTEL1Q9NZ71 1219 aa16.31■□□□□ 0.2
COL9A2-208ENST00000488463 TELO2Q9Y4R8 837 aa16.31■□□□□ 0.2
COL9A2-208ENST00000488463 UBIAD1Q9Y5Z9 338 aa16.31■□□□□ 0.2
COL9A2-208ENST00000488463 ESYT2A0FGR8 921 aa16.3■□□□□ 0.2
COL9A2-208ENST00000488463 SMCO2A6NFE2 343 aa16.3■□□□□ 0.2
COL9A2-208ENST00000488463 PPFIA3O75145 1194 aa16.3■□□□□ 0.2
COL9A2-208ENST00000488463 TIMP1P01033 207 aa16.3■□□□□ 0.2
COL9A2-208ENST00000488463 BRDTQ58F21 947 aaPredicted RBP16.3■□□□□ 0.2
COL9A2-208ENST00000488463 DHX37Q8IY37 1157 aaKnown RBP16.3■□□□□ 0.2
COL9A2-208ENST00000488463 PPP1R13LQ8WUF5 828 aa16.3■□□□□ 0.2
COL9A2-208ENST00000488463 CRYGNQ8WXF5 182 aa16.3■□□□□ 0.2
COL9A2-208ENST00000488463 CTAGE1Q96RT6 745 aa16.3■□□□□ 0.2
COL9A2-208ENST00000488463 LBHD1Q9BQE6 289 aaPredicted RBP16.3■□□□□ 0.2
COL9A2-208ENST00000488463 ZMYND12Q9H0C1 365 aa16.3■□□□□ 0.2
COL9A2-208ENST00000488463 HAS3O00219 553 aa16.29■□□□□ 0.2
COL9A2-208ENST00000488463 FIBPO43427 364 aa16.29■□□□□ 0.2
COL9A2-208ENST00000488463 F2P00734 622 aa16.29■□□□□ 0.2
COL9A2-208ENST00000488463 RAG1P15918 1043 aa16.29■□□□□ 0.2
COL9A2-208ENST00000488463 ADCY7P51828 1080 aa16.29■□□□□ 0.2
COL9A2-208ENST00000488463 DGKDQ16760 1214 aa16.29■□□□□ 0.2
COL9A2-208ENST00000488463 GNPTABQ3T906 1256 aa16.29■□□□□ 0.2
COL9A2-208ENST00000488463 NFRKBQ6P4R8 1299 aa16.29■□□□□ 0.2
COL9A2-208ENST00000488463 VWCEQ96DN2 955 aa16.29■□□□□ 0.2
COL9A2-208ENST00000488463 PGBD1Q96JS3 809 aa16.29■□□□□ 0.2
COL9A2-208ENST00000488463 SENP7Q9BQF6 1050 aa16.29■□□□□ 0.2
COL9A2-208ENST00000488463 TRMT13Q9NUP7 481 aaKnown RBP16.29■□□□□ 0.2
COL9A2-208ENST00000488463 TMEM260Q9NX78 707 aa16.29■□□□□ 0.2
COL9A2-208ENST00000488463 TPCN1Q9ULQ1 816 aa16.29■□□□□ 0.2
COL9A2-208ENST00000488463 TRIP12Q14669 1992 aaPredicted RBP16.29■□□□□ 0.2
COL9A2-208ENST00000488463 UMODL1Q5DID0 1318 aa16.28■□□□□ 0.2
COL9A2-208ENST00000488463 SPDYE3A6NKU9 549 aa16.28■□□□□ 0.2
COL9A2-208ENST00000488463 SORBS3O60504 671 aa16.28■□□□□ 0.2
COL9A2-208ENST00000488463 ATP9AO75110 1047 aa16.28■□□□□ 0.2
COL9A2-208ENST00000488463 PPFIA4O75335 1185 aa16.28■□□□□ 0.2
COL9A2-208ENST00000488463 KCNA2P16389 499 aa16.28■□□□□ 0.2
COL9A2-208ENST00000488463 LRIT3Q3SXY7 679 aa16.28■□□□□ 0.2
COL9A2-208ENST00000488463 C9orf50Q5SZB4 431 aa16.28■□□□□ 0.2
COL9A2-208ENST00000488463 MFSD5Q6N075 450 aa16.28■□□□□ 0.2
COL9A2-208ENST00000488463 METTL7BQ6UX53 244 aa16.28■□□□□ 0.2
COL9A2-208ENST00000488463 C16orf59Q7L2K0 433 aa16.28■□□□□ 0.2
COL9A2-208ENST00000488463 SESTD1Q86VW0 696 aa16.28■□□□□ 0.2
COL9A2-208ENST00000488463 GPRASP2Q96D09 838 aa16.28■□□□□ 0.2
COL9A2-208ENST00000488463 SPATA33Q96N06 139 aa16.28■□□□□ 0.2
COL9A2-208ENST00000488463 C16orf70Q9BSU1 422 aa16.28■□□□□ 0.2
COL9A2-208ENST00000488463 NOC4LQ9BVI4 516 aaKnown RBP16.28■□□□□ 0.2
COL9A2-208ENST00000488463 SLC26A6Q9BXS9 759 aa16.28■□□□□ 0.2
COL9A2-208ENST00000488463 ANO3Q9BYT9 981 aa16.28■□□□□ 0.2
COL9A2-208ENST00000488463 COL6A3P12111 3177 aa16.27■□□□□ 0.2
COL9A2-208ENST00000488463 TLR3O15455 904 aaKnown RBP16.27■□□□□ 0.2
COL9A2-208ENST00000488463 EDIL3O43854 480 aa16.27■□□□□ 0.2
COL9A2-208ENST00000488463 PFKFB2O60825 505 aa16.27■□□□□ 0.2
COL9A2-208ENST00000488463 FOSP01100 380 aaPredicted RBP16.27■□□□□ 0.2
COL9A2-208ENST00000488463 ZNF286BP0CG31 522 aa16.27■□□□□ 0.2
COL9A2-208ENST00000488463 SREBF1P36956 1147 aa16.27■□□□□ 0.2
COL9A2-208ENST00000488463 AK2P54819 239 aa16.27■□□□□ 0.2
COL9A2-208ENST00000488463 PTPN11Q06124 597 aaPredicted RBP16.27■□□□□ 0.2
COL9A2-208ENST00000488463 SCRN1Q12765 414 aa16.27■□□□□ 0.2
COL9A2-208ENST00000488463 AP3B2Q13367 1082 aa16.27■□□□□ 0.2
COL9A2-208ENST00000488463 CYFIP1Q7L576 1253 aa16.27■□□□□ 0.2
COL9A2-208ENST00000488463 CYP2W1Q8TAV3 490 aa16.27■□□□□ 0.2
COL9A2-208ENST00000488463 GLT8D2Q9H1C3 349 aa16.27■□□□□ 0.2
COL9A2-208ENST00000488463 JADE2Q9NQC1 790 aa16.27■□□□□ 0.2
COL9A2-208ENST00000488463 A0A0C4DFX4 3053 aa16.26■□□□□ 0.19
COL9A2-208ENST00000488463 CTDNEP1O95476 244 aa16.26■□□□□ 0.19
COL9A2-208ENST00000488463 CYP2C18P33260 490 aa16.26■□□□□ 0.19
COL9A2-208ENST00000488463 STK3Q13188 491 aa16.26■□□□□ 0.19
COL9A2-208ENST00000488463 NEDD9Q14511 834 aa16.26■□□□□ 0.19
COL9A2-208ENST00000488463 HIC1Q14526 733 aa16.26■□□□□ 0.19
COL9A2-208ENST00000488463 SHHQ15465 462 aa16.26■□□□□ 0.19
COL9A2-208ENST00000488463 NPY5RQ15761 445 aa16.26■□□□□ 0.19
COL9A2-208ENST00000488463 LRCH3Q96II8 777 aa16.26■□□□□ 0.19
COL9A2-208ENST00000488463 KIF2CQ99661 725 aa16.26■□□□□ 0.19
COL9A2-208ENST00000488463 GPR20Q99678 358 aa16.26■□□□□ 0.19
COL9A2-208ENST00000488463 PPP1R12CQ9BZL4 782 aa16.26■□□□□ 0.19
COL9A2-208ENST00000488463 WNT8AQ9H1J5 351 aa16.26■□□□□ 0.19
COL9A2-208ENST00000488463 MLXIPQ9HAP2 919 aa16.26■□□□□ 0.19
COL9A2-208ENST00000488463 CHD7Q9P2D1 2997 aa16.26■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms