RNA–Protein interactions for RNA: ENST00000488427.1

ITGB1-214, Transcript of integrin subunit beta 1, humanhuman

TSL 1 (best)

Gene ITGB1, Length 861 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-214ENST00000488427 MYOCOSA0A1B0GUC4 107 aa6.36□□□□□ -1.39
ITGB1-214ENST00000488427 B4E1Z4 1266 aa6.36□□□□□ -1.39
ITGB1-214ENST00000488427 ETV2O00321 342 aaPredicted RBP6.36□□□□□ -1.39
ITGB1-214ENST00000488427 PLD2O14939 933 aa6.36□□□□□ -1.39
ITGB1-214ENST00000488427 C1QTNF9P0C862 333 aa6.36□□□□□ -1.39
ITGB1-214ENST00000488427 GNAT1P11488 350 aa6.36□□□□□ -1.39
ITGB1-214ENST00000488427 ST5P78524 1137 aa6.36□□□□□ -1.39
ITGB1-214ENST00000488427 ZNF200P98182 395 aaPredicted RBP6.36□□□□□ -1.39
ITGB1-214ENST00000488427 GUCY1A3Q02108 690 aa6.36□□□□□ -1.39
ITGB1-214ENST00000488427 STEAP3Q658P3 488 aa6.36□□□□□ -1.39
ITGB1-214ENST00000488427 ATG14Q6ZNE5 492 aa6.36□□□□□ -1.39
ITGB1-214ENST00000488427 CPA5Q8WXQ8 436 aa6.36□□□□□ -1.39
ITGB1-214ENST00000488427 APPBP2Q92624 585 aa6.36□□□□□ -1.39
ITGB1-214ENST00000488427 KISS1RQ969F8 398 aaPredicted RBP6.36□□□□□ -1.39
ITGB1-214ENST00000488427 EXOC2Q96KP1 924 aa6.36□□□□□ -1.39
ITGB1-214ENST00000488427 NDOR1Q9UHB4 597 aa6.36□□□□□ -1.39
ITGB1-214ENST00000488427 CNOT6Q9ULM6 557 aaKnown RBP6.36□□□□□ -1.39
ITGB1-214ENST00000488427 PCDHB4Q9Y5E5 795 aa6.36□□□□□ -1.39
ITGB1-214ENST00000488427 PRRG2O14669 202 aa6.35□□□□□ -1.39
ITGB1-214ENST00000488427 NPTXRO95502 500 aa6.35□□□□□ -1.39
ITGB1-214ENST00000488427 SOD2P04179 222 aa6.35□□□□□ -1.39
ITGB1-214ENST00000488427 LCP1P13796 627 aa6.35□□□□□ -1.39
ITGB1-214ENST00000488427 TCEA2Q15560 299 aa6.35□□□□□ -1.39
ITGB1-214ENST00000488427 NTRK3Q16288 839 aa6.35□□□□□ -1.39
ITGB1-214ENST00000488427 TRIM61Q5EBN2 209 aa6.35□□□□□ -1.39
ITGB1-214ENST00000488427 EMC4Q5J8M3 183 aa6.35□□□□□ -1.39
ITGB1-214ENST00000488427 CIAPIN1Q6FI81 312 aa6.35□□□□□ -1.39
ITGB1-214ENST00000488427 KCNT2Q6UVM3 1135 aa6.35□□□□□ -1.39
ITGB1-214ENST00000488427 ETV3LQ6ZN32 361 aa6.35□□□□□ -1.39
ITGB1-214ENST00000488427 MILR1Q7Z6M3 343 aa6.35□□□□□ -1.39
ITGB1-214ENST00000488427 NLRP10Q86W26 655 aa6.35□□□□□ -1.39
ITGB1-214ENST00000488427 AMIGO3Q86WK7 504 aa6.35□□□□□ -1.39
ITGB1-214ENST00000488427 LDHDQ86WU2 507 aa6.35□□□□□ -1.39
ITGB1-214ENST00000488427 LILRB2Q8N423 598 aa6.35□□□□□ -1.39
ITGB1-214ENST00000488427 SMOC1Q9H4F8 434 aa6.35□□□□□ -1.39
ITGB1-214ENST00000488427 CNTD2Q9H8S5 307 aa6.35□□□□□ -1.39
ITGB1-214ENST00000488427 TMA7Q9Y2S6 64 aaKnown RBP6.35□□□□□ -1.39
ITGB1-214ENST00000488427 B8ZZF3 427 aa6.34□□□□□ -1.39
ITGB1-214ENST00000488427 PPP1R11O60927 126 aaPredicted RBP6.34□□□□□ -1.39
ITGB1-214ENST00000488427 CLSTN1O94985 981 aa6.34□□□□□ -1.39
ITGB1-214ENST00000488427 FLT3P36888 993 aa6.34□□□□□ -1.39
ITGB1-214ENST00000488427 FNDC3BQ53EP0 1204 aaKnown RBP6.34□□□□□ -1.39
ITGB1-214ENST00000488427 ZC3H7AQ8IWR0 971 aaKnown RBP6.34□□□□□ -1.39
ITGB1-214ENST00000488427 PPIL4Q8WUA2 492 aaKnown RBP eCLIP6.34□□□□□ -1.39
ITGB1-214ENST00000488427 FBXW5Q969U6 566 aa6.34□□□□□ -1.39
ITGB1-214ENST00000488427 KRTAP4-5Q9BYR2 181 aa6.34□□□□□ -1.39
ITGB1-214ENST00000488427 NCOA5Q9HCD5 579 aaKnown RBP6.34□□□□□ -1.39
ITGB1-214ENST00000488427 SLC6A20Q9NP91 592 aa6.34□□□□□ -1.39
ITGB1-214ENST00000488427 TMEM260Q9NX78 707 aa6.34□□□□□ -1.39
ITGB1-214ENST00000488427 RAPGEFL1Q9UHV5 662 aa6.34□□□□□ -1.39
ITGB1-214ENST00000488427 PALD1Q9ULE6 856 aa6.34□□□□□ -1.39
ITGB1-214ENST00000488427 BLACEA4D250 179 aa6.33□□□□□ -1.4
ITGB1-214ENST00000488427 WNT9AO14904 365 aa6.33□□□□□ -1.4
ITGB1-214ENST00000488427 KCNQ2O43526 872 aa6.33□□□□□ -1.4
ITGB1-214ENST00000488427 KCNA10Q16322 511 aa6.33□□□□□ -1.4
ITGB1-214ENST00000488427 LCE5AQ5TCM9 118 aa6.33□□□□□ -1.4
ITGB1-214ENST00000488427 FOXB2Q5VYV0 432 aa6.33□□□□□ -1.4
ITGB1-214ENST00000488427 TTLL10Q6ZVT0 673 aa6.33□□□□□ -1.4
ITGB1-214ENST00000488427 NLGN4XQ8N0W4 816 aa6.33□□□□□ -1.4
ITGB1-214ENST00000488427 CD320Q9NPF0 282 aa6.33□□□□□ -1.4
ITGB1-214ENST00000488427 MYOTQ9UBF9 498 aa6.33□□□□□ -1.4
ITGB1-214ENST00000488427 SMG5Q9UPR3 1016 aaKnown RBP6.33□□□□□ -1.4
ITGB1-214ENST00000488427 PCDHA5Q9Y5H7 936 aa6.33□□□□□ -1.4
ITGB1-214ENST00000488427 IRS2Q9Y4H2 1338 aa6.32□□□□□ -1.4
ITGB1-214ENST00000488427 NPIPB6E9PJ23 425 aa6.32□□□□□ -1.4
ITGB1-214ENST00000488427 ARNTLO00327 626 aa6.32□□□□□ -1.4
ITGB1-214ENST00000488427 BUB1BO60566 1050 aaPredicted RBP6.32□□□□□ -1.4
ITGB1-214ENST00000488427 CDC45O75419 566 aa6.32□□□□□ -1.4
ITGB1-214ENST00000488427 KRT1P04264 644 aa6.32□□□□□ -1.4
ITGB1-214ENST00000488427 C6orf222P0C671 652 aaPredicted RBP6.32□□□□□ -1.4
ITGB1-214ENST00000488427 CYP2C8P10632 490 aa6.32□□□□□ -1.4
ITGB1-214ENST00000488427 CDR1P51861 262 aa6.32□□□□□ -1.4
ITGB1-214ENST00000488427 LINC00310P59036 64 aa6.32□□□□□ -1.4
ITGB1-214ENST00000488427 NKX3-2P78367 333 aa6.32□□□□□ -1.4
ITGB1-214ENST00000488427 CACNB2Q08289 660 aaPredicted RBP6.32□□□□□ -1.4
ITGB1-214ENST00000488427 CRY1Q16526 586 aa6.32□□□□□ -1.4
ITGB1-214ENST00000488427 C16orf86Q6ZW13 317 aa6.32□□□□□ -1.4
ITGB1-214ENST00000488427 OTOP3Q7RTS5 596 aa6.32□□□□□ -1.4
ITGB1-214ENST00000488427 B3GNT8Q7Z7M8 397 aa6.32□□□□□ -1.4
ITGB1-214ENST00000488427 FAM126BQ8IXS8 530 aa6.32□□□□□ -1.4
ITGB1-214ENST00000488427 GSTCDQ8NEC7 633 aa6.32□□□□□ -1.4
ITGB1-214ENST00000488427 WRNIP1Q96S55 665 aa6.32□□□□□ -1.4
ITGB1-214ENST00000488427 PIF1Q9H611 641 aa6.32□□□□□ -1.4
ITGB1-214ENST00000488427 CATSPERZQ9NTU4 200 aa6.32□□□□□ -1.4
ITGB1-214ENST00000488427 TRAF6Q9Y4K3 522 aa6.32□□□□□ -1.4
ITGB1-214ENST00000488427 LMTK3Q96Q04 1460 aa6.32□□□□□ -1.4
ITGB1-214ENST00000488427 ARVCFO00192 962 aa6.31□□□□□ -1.4
ITGB1-214ENST00000488427 SGSM2O43147 1006 aa6.31□□□□□ -1.4
ITGB1-214ENST00000488427 MSCO60682 206 aa6.31□□□□□ -1.4
ITGB1-214ENST00000488427 CYP7B1O75881 506 aa6.31□□□□□ -1.4
ITGB1-214ENST00000488427 ASGR2P07307 311 aa6.31□□□□□ -1.4
ITGB1-214ENST00000488427 PMLP29590 882 aa6.31□□□□□ -1.4
ITGB1-214ENST00000488427 CNKSR3Q6P9H4 555 aa6.31□□□□□ -1.4
ITGB1-214ENST00000488427 DDX53Q86TM3 631 aaKnown RBP6.31□□□□□ -1.4
ITGB1-214ENST00000488427 MIB1Q86YT6 1006 aa6.31□□□□□ -1.4
ITGB1-214ENST00000488427 TTLL11Q8NHH1 800 aa6.31□□□□□ -1.4
ITGB1-214ENST00000488427 KCNJ15Q99712 375 aa6.31□□□□□ -1.4
ITGB1-214ENST00000488427 SLKQ9H2G2 1235 aaPredicted RBP6.31□□□□□ -1.4
ITGB1-214ENST00000488427 FBLN5Q9UBX5 448 aa6.31□□□□□ -1.4
ITGB1-214ENST00000488427 FBXL7Q9UJT9 491 aa6.31□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms