RNA–Protein interactions for RNA: ENST00000488017.1

SMC4-220, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 4

Gene SMC4, Length 592 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-220ENST00000488017 TMEM209Q96SK2 561 aa6.02□□□□□ -1.45
SMC4-220ENST00000488017 BTG4Q9NY30 223 aa6.02□□□□□ -1.45
SMC4-220ENST00000488017 MLLT6P55198 1093 aaPredicted RBP6.01□□□□□ -1.45
SMC4-220ENST00000488017 INHBEP58166 350 aa6.01□□□□□ -1.45
SMC4-220ENST00000488017 ZNF394Q53GI3 561 aa6.01□□□□□ -1.45
SMC4-220ENST00000488017 CYP26B1Q9NR63 512 aa6.01□□□□□ -1.45
SMC4-220ENST00000488017 DTLQ9NZJ0 730 aa6.01□□□□□ -1.45
SMC4-220ENST00000488017 FTSJ1Q9UET6 329 aa6.01□□□□□ -1.45
SMC4-220ENST00000488017 NAT2P11245 290 aa6□□□□□ -1.45
SMC4-220ENST00000488017 FPR2P25090 351 aa6□□□□□ -1.45
SMC4-220ENST00000488017 SOX9P48436 509 aa6□□□□□ -1.45
SMC4-220ENST00000488017 ZNF143P52747 638 aaPredicted RBP6□□□□□ -1.45
SMC4-220ENST00000488017 FANCCQ00597 558 aa6□□□□□ -1.45
SMC4-220ENST00000488017 NFATC3Q12968 1075 aa6□□□□□ -1.45
SMC4-220ENST00000488017 E4F1Q66K89 784 aaPredicted RBP6□□□□□ -1.45
SMC4-220ENST00000488017 BVESQ8NE79 360 aa6□□□□□ -1.45
SMC4-220ENST00000488017 NPLOC4Q8TAT6 608 aa6□□□□□ -1.45
SMC4-220ENST00000488017 Q8TCH9 128 aa6□□□□□ -1.45
SMC4-220ENST00000488017 ZCCHC14Q8WYQ9 949 aaKnown RBP6□□□□□ -1.45
SMC4-220ENST00000488017 TRMT2BQ96GJ1 504 aaKnown RBP6□□□□□ -1.45
SMC4-220ENST00000488017 ZSWIM3Q96MP5 696 aa6□□□□□ -1.45
SMC4-220ENST00000488017 APBA2Q99767 749 aa6□□□□□ -1.45
SMC4-220ENST00000488017 MEGF9Q9H1U4 602 aa6□□□□□ -1.45
SMC4-220ENST00000488017 BARX1Q9HBU1 254 aaPredicted RBP6□□□□□ -1.45
SMC4-220ENST00000488017 GINM1Q9NU53 330 aa6□□□□□ -1.45
SMC4-220ENST00000488017 APEX2Q9UBZ4 518 aa6□□□□□ -1.45
SMC4-220ENST00000488017 PCDHGB7Q9Y5F8 929 aa6□□□□□ -1.45
SMC4-220ENST00000488017 TNFRSF18Q9Y5U5 241 aa6□□□□□ -1.45
SMC4-220ENST00000488017 NOP56O00567 594 aaKnown RBP5.99□□□□□ -1.45
SMC4-220ENST00000488017 HGSO14964 777 aaPredicted RBP5.99□□□□□ -1.45
SMC4-220ENST00000488017 B4GALT4O60513 344 aa5.99□□□□□ -1.45
SMC4-220ENST00000488017 HS1BP3Q53T59 392 aa5.99□□□□□ -1.45
SMC4-220ENST00000488017 KIAA1211LQ6NV74 962 aa5.99□□□□□ -1.45
SMC4-220ENST00000488017 TEPPQ6URK8 271 aa5.99□□□□□ -1.45
SMC4-220ENST00000488017 CEP68Q76N32 757 aa5.99□□□□□ -1.45
SMC4-220ENST00000488017 FRS2Q8WU20 508 aa5.99□□□□□ -1.45
SMC4-220ENST00000488017 PTPN18Q99952 460 aa5.99□□□□□ -1.45
SMC4-220ENST00000488017 CROTQ9UKG9 612 aa5.99□□□□□ -1.45
SMC4-220ENST00000488017 COA3Q9Y2R0 106 aaPredicted RBP5.99□□□□□ -1.45
SMC4-220ENST00000488017 MYO1BO43795 1136 aa5.98□□□□□ -1.45
SMC4-220ENST00000488017 GTF2IRD2BQ6EKJ0 949 aa5.98□□□□□ -1.45
SMC4-220ENST00000488017 GTF2IRD2Q86UP8 949 aa5.98□□□□□ -1.45
SMC4-220ENST00000488017 TRIM59Q8IWR1 403 aa5.98□□□□□ -1.45
SMC4-220ENST00000488017 ZNF341Q9BYN7 854 aa5.98□□□□□ -1.45
SMC4-220ENST00000488017 NKX2-4Q9H2Z4 354 aa5.98□□□□□ -1.45
SMC4-220ENST00000488017 SEC61A2Q9H9S3 476 aa5.98□□□□□ -1.45
SMC4-220ENST00000488017 HSPBP1Q9NZL4 362 aa5.98□□□□□ -1.45
SMC4-220ENST00000488017 DDX41Q9UJV9 622 aaKnown RBP5.98□□□□□ -1.45
SMC4-220ENST00000488017 ADAM29Q9UKF5 820 aa5.98□□□□□ -1.45
SMC4-220ENST00000488017 TADA3O75528 432 aa5.97□□□□□ -1.45
SMC4-220ENST00000488017 PDIA4P13667 645 aaKnown RBP5.97□□□□□ -1.45
SMC4-220ENST00000488017 CASP7P55210 303 aa5.97□□□□□ -1.45
SMC4-220ENST00000488017 RACK1P63244 317 aaKnown RBP5.97□□□□□ -1.45
SMC4-220ENST00000488017 KCNAB2Q13303 367 aa5.97□□□□□ -1.45
SMC4-220ENST00000488017 EMC4Q5J8M3 183 aa5.97□□□□□ -1.45
SMC4-220ENST00000488017 TRMT10BQ6PF06 316 aaKnown RBP5.97□□□□□ -1.45
SMC4-220ENST00000488017 VHLLQ6RSH7 139 aa5.97□□□□□ -1.45
SMC4-220ENST00000488017 NLRP10Q86W26 655 aa5.97□□□□□ -1.45
SMC4-220ENST00000488017 DIO2Q92813 273 aa5.97□□□□□ -1.45
SMC4-220ENST00000488017 TMEM169Q96HH4 297 aa5.97□□□□□ -1.45
SMC4-220ENST00000488017 TIMELESSQ9UNS1 1208 aa5.97□□□□□ -1.45
SMC4-220ENST00000488017 PCDHB4Q9Y5E5 795 aa5.97□□□□□ -1.45
SMC4-220ENST00000488017 TCRBV5S2A0A599 114 aa5.96□□□□□ -1.46
SMC4-220ENST00000488017 H7BY64 318 aa5.96□□□□□ -1.46
SMC4-220ENST00000488017 LRG1P02750 347 aa5.96□□□□□ -1.46
SMC4-220ENST00000488017 BCL6P41182 706 aa5.96□□□□□ -1.46
SMC4-220ENST00000488017 FOXE3Q13461 319 aa5.96□□□□□ -1.46
SMC4-220ENST00000488017 FHL2Q14192 279 aa5.96□□□□□ -1.46
SMC4-220ENST00000488017 PRKD1Q15139 912 aaPredicted RBP5.96□□□□□ -1.46
SMC4-220ENST00000488017 MIIPQ5JXC2 388 aa5.96□□□□□ -1.46
SMC4-220ENST00000488017 ARRDC4Q8NCT1 418 aa5.96□□□□□ -1.46
SMC4-220ENST00000488017 MRGPRX3Q96LB0 322 aa5.96□□□□□ -1.46
SMC4-220ENST00000488017 EFR3BQ9Y2G0 817 aa5.96□□□□□ -1.46
SMC4-220ENST00000488017 ZDHHC9Q9Y397 364 aa5.96□□□□□ -1.46
SMC4-220ENST00000488017 WDR33Q9C0J8 1336 aaKnown RBP5.96□□□□□ -1.46
SMC4-220ENST00000488017 CYP4F3Q08477 520 aa5.95□□□□□ -1.46
SMC4-220ENST00000488017 PAK2Q13177 524 aa5.95□□□□□ -1.46
SMC4-220ENST00000488017 TESK1Q15569 626 aa5.95□□□□□ -1.46
SMC4-220ENST00000488017 PPP2R5EQ16537 467 aa5.95□□□□□ -1.46
SMC4-220ENST00000488017 STEAP3Q658P3 488 aa5.95□□□□□ -1.46
SMC4-220ENST00000488017 BACH2Q9BYV9 841 aa5.95□□□□□ -1.46
SMC4-220ENST00000488017 NPIPB8E9PQR5 432 aa5.94□□□□□ -1.46
SMC4-220ENST00000488017 CNOT4O95628 575 aaKnown RBP5.94□□□□□ -1.46
SMC4-220ENST00000488017 CHGBP05060 677 aa5.94□□□□□ -1.46
SMC4-220ENST00000488017 COL6A1P12109 1028 aa5.94□□□□□ -1.46
SMC4-220ENST00000488017 RNF207Q6ZRF8 634 aa5.94□□□□□ -1.46
SMC4-220ENST00000488017 RALYLQ86SE5 291 aaKnown RBP5.94□□□□□ -1.46
SMC4-220ENST00000488017 ZNF654Q8IZM8 581 aa5.94□□□□□ -1.46
SMC4-220ENST00000488017 PHOSPHO1Q8TCT1 267 aa5.94□□□□□ -1.46
SMC4-220ENST00000488017 RASGRP4Q8TDF6 673 aa5.94□□□□□ -1.46
SMC4-220ENST00000488017 SLC4A7Q9Y6M7 1214 aa5.94□□□□□ -1.46
SMC4-220ENST00000488017 MEFVO15553 781 aaPredicted RBP5.93□□□□□ -1.46
SMC4-220ENST00000488017 HOXC12P31275 282 aa5.93□□□□□ -1.46
SMC4-220ENST00000488017 ABHD18Q0P651 414 aa5.93□□□□□ -1.46
SMC4-220ENST00000488017 ACBD5Q5T8D3 534 aaPredicted RBP5.93□□□□□ -1.46
SMC4-220ENST00000488017 CCDC103Q8IW40 242 aa5.93□□□□□ -1.46
SMC4-220ENST00000488017 AMER2Q8N7J2 671 aa5.93□□□□□ -1.46
SMC4-220ENST00000488017 CHFRQ96EP1 664 aa5.93□□□□□ -1.46
SMC4-220ENST00000488017 ZNF503Q96F45 646 aa5.93□□□□□ -1.46
SMC4-220ENST00000488017 SHDQ96IW2 340 aa5.93□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms