RNA–Protein interactions for RNA: ENST00000488016.1

NECTIN3-209, Transcript of nectin cell adhesion molecule 3, humanhuman

TSL 3

Gene NECTIN3, Length 829 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECTIN3-209ENST00000488016 NLRP8Q86W28 1048 aa9.15□□□□□ -0.94
NECTIN3-209ENST00000488016 SERBP1Q8NC51 408 aaKnown RBP eCLIP9.15□□□□□ -0.94
NECTIN3-209ENST00000488016 GPRC5AQ8NFJ5 357 aa9.15□□□□□ -0.94
NECTIN3-209ENST00000488016 LPAR1Q92633 364 aa9.15□□□□□ -0.94
NECTIN3-209ENST00000488016 IPO9Q96P70 1041 aaKnown RBP9.15□□□□□ -0.94
NECTIN3-209ENST00000488016 MOV10L1Q9BXT6 1211 aaKnown RBP9.15□□□□□ -0.94
NECTIN3-209ENST00000488016 LRRC2Q9BYS8 371 aa9.15□□□□□ -0.94
NECTIN3-209ENST00000488016 ZNF358Q9NW07 568 aa9.15□□□□□ -0.94
NECTIN3-209ENST00000488016 ZSWIM5Q9P217 1185 aa9.15□□□□□ -0.94
NECTIN3-209ENST00000488016 MORF4L1Q9UBU8 362 aa9.15□□□□□ -0.94
NECTIN3-209ENST00000488016 SRRDQ9UH36 339 aa9.15□□□□□ -0.94
NECTIN3-209ENST00000488016 TNKSO95271 1327 aa9.14□□□□□ -0.95
NECTIN3-209ENST00000488016 TMEM232C9JQI7 657 aa9.14□□□□□ -0.95
NECTIN3-209ENST00000488016 GOLGA8HP0CJ92 632 aa9.14□□□□□ -0.95
NECTIN3-209ENST00000488016 BMP3P12645 472 aa9.14□□□□□ -0.95
NECTIN3-209ENST00000488016 CPA1P15085 419 aa9.14□□□□□ -0.95
NECTIN3-209ENST00000488016 CYP2B6P20813 491 aa9.14□□□□□ -0.95
NECTIN3-209ENST00000488016 SLC16A2P36021 539 aa9.14□□□□□ -0.95
NECTIN3-209ENST00000488016 NOVP48745 357 aa9.14□□□□□ -0.95
NECTIN3-209ENST00000488016 COG2Q14746 738 aa9.14□□□□□ -0.95
NECTIN3-209ENST00000488016 LBX2Q6XYB7 198 aa9.14□□□□□ -0.95
NECTIN3-209ENST00000488016 RAB11FIP4Q86YS3 637 aa9.14□□□□□ -0.95
NECTIN3-209ENST00000488016 ENAHQ8N8S7 591 aaPredicted RBP9.14□□□□□ -0.95
NECTIN3-209ENST00000488016 GMCL1P1Q8NEA9 526 aa9.14□□□□□ -0.95
NECTIN3-209ENST00000488016 REPS2Q8NFH8 660 aa9.14□□□□□ -0.95
NECTIN3-209ENST00000488016 ESR2Q92731 530 aa9.14□□□□□ -0.95
NECTIN3-209ENST00000488016 TCEANC2Q96MN5 208 aa9.14□□□□□ -0.95
NECTIN3-209ENST00000488016 SLF1Q9BQI6 1058 aa9.14□□□□□ -0.95
NECTIN3-209ENST00000488016 RNF41Q9H4P4 317 aaPredicted RBP9.14□□□□□ -0.95
NECTIN3-209ENST00000488016 RAVER2Q9HCJ3 691 aaKnown RBP9.14□□□□□ -0.95
NECTIN3-209ENST00000488016 ZDHHC3Q9NYG2 299 aa9.14□□□□□ -0.95
NECTIN3-209ENST00000488016 CTNNA3Q9UI47 895 aa9.14□□□□□ -0.95
NECTIN3-209ENST00000488016 GDF2Q9UK05 429 aaPredicted RBP9.14□□□□□ -0.95
NECTIN3-209ENST00000488016 PPP1R9AQ9ULJ8 1098 aa9.14□□□□□ -0.95
NECTIN3-209ENST00000488016 PCDHGC4Q9Y5F7 938 aa9.14□□□□□ -0.95
NECTIN3-209ENST00000488016 USP3Q9Y6I4 520 aa9.14□□□□□ -0.95
NECTIN3-209ENST00000488016 COL6A3P12111 3177 aa9.14□□□□□ -0.95
NECTIN3-209ENST00000488016 A0A1W2PNR3 127 aa9.13□□□□□ -0.95
NECTIN3-209ENST00000488016 VWA5AO00534 786 aa9.13□□□□□ -0.95
NECTIN3-209ENST00000488016 OIP5O43482 229 aa9.13□□□□□ -0.95
NECTIN3-209ENST00000488016 BNIP3LO60238 219 aa9.13□□□□□ -0.95
NECTIN3-209ENST00000488016 TOP1P11387 765 aaKnown RBP9.13□□□□□ -0.95
NECTIN3-209ENST00000488016 ERCC3P19447 782 aa9.13□□□□□ -0.95
NECTIN3-209ENST00000488016 SLC1A4P43007 532 aa9.13□□□□□ -0.95
NECTIN3-209ENST00000488016 IKQ13123 557 aaPredicted RBP9.13□□□□□ -0.95
NECTIN3-209ENST00000488016 NECTIN1Q15223 517 aa9.13□□□□□ -0.95
NECTIN3-209ENST00000488016 CCL14Q16627 93 aa9.13□□□□□ -0.95
NECTIN3-209ENST00000488016 ADCK5Q3MIX3 580 aa9.13□□□□□ -0.95
NECTIN3-209ENST00000488016 CCDC174Q6PII3 467 aa9.13□□□□□ -0.95
NECTIN3-209ENST00000488016 KIAA1211Q6ZU35 1233 aa9.13□□□□□ -0.95
NECTIN3-209ENST00000488016 GPR142Q7Z601 462 aa9.13□□□□□ -0.95
NECTIN3-209ENST00000488016 MB21D2Q8IYB1 491 aaPredicted RBP9.13□□□□□ -0.95
NECTIN3-209ENST00000488016 ZNF295-AS1Q8N0V1 137 aa9.13□□□□□ -0.95
NECTIN3-209ENST00000488016 CPXCR1Q8N123 301 aa9.13□□□□□ -0.95
NECTIN3-209ENST00000488016 KCTD17Q8N5Z5 321 aa9.13□□□□□ -0.95
NECTIN3-209ENST00000488016 TPCN2Q8NHX9 752 aa9.13□□□□□ -0.95
NECTIN3-209ENST00000488016 RAET1EQ8TD07 263 aa9.13□□□□□ -0.95
NECTIN3-209ENST00000488016 UCN2Q96RP3 112 aa9.13□□□□□ -0.95
NECTIN3-209ENST00000488016 ZCCHC2Q9C0B9 1178 aaKnown RBP9.13□□□□□ -0.95
NECTIN3-209ENST00000488016 SPATC1LQ9H0A9 340 aa9.13□□□□□ -0.95
NECTIN3-209ENST00000488016 TCP11L1Q9NUJ3 509 aa9.13□□□□□ -0.95
NECTIN3-209ENST00000488016 SCHIP1Q9P0W5 487 aaPredicted RBP9.13□□□□□ -0.95
NECTIN3-209ENST00000488016 GJD2Q9UKL4 321 aa9.13□□□□□ -0.95
NECTIN3-209ENST00000488016 RABGAP1Q9Y3P9 1069 aa9.13□□□□□ -0.95
NECTIN3-209ENST00000488016 RIPK3Q9Y572 518 aa9.13□□□□□ -0.95
NECTIN3-209ENST00000488016 SMCHD1A6NHR9 2005 aa9.12□□□□□ -0.95
NECTIN3-209ENST00000488016 TRIOBPQ9H2D6 2365 aa9.12□□□□□ -0.95
NECTIN3-209ENST00000488016 ATXN7O15265 892 aaPredicted RBP9.12□□□□□ -0.95
NECTIN3-209ENST00000488016 PDHBP11177 359 aa9.12□□□□□ -0.95
NECTIN3-209ENST00000488016 SEC23AQ15436 765 aa9.12□□□□□ -0.95
NECTIN3-209ENST00000488016 SLC9C1Q4G0N8 1177 aa9.12□□□□□ -0.95
NECTIN3-209ENST00000488016 NCAPG2Q86XI2 1143 aa9.12□□□□□ -0.95
NECTIN3-209ENST00000488016 BEND7Q8N7W2 519 aaPredicted RBP9.12□□□□□ -0.95
NECTIN3-209ENST00000488016 GOLGA6L1Q8N7Z2 621 aa9.12□□□□□ -0.95
NECTIN3-209ENST00000488016 MYL10Q9BUA6 226 aa9.12□□□□□ -0.95
NECTIN3-209ENST00000488016 KRT23Q9C075 422 aa9.12□□□□□ -0.95
NECTIN3-209ENST00000488016 UBA5Q9GZZ9 404 aa9.12□□□□□ -0.95
NECTIN3-209ENST00000488016 CWC22Q9HCG8 908 aaKnown RBP9.12□□□□□ -0.95
NECTIN3-209ENST00000488016 HOMER2Q9NSB8 354 aa9.12□□□□□ -0.95
NECTIN3-209ENST00000488016 NDFIP2Q9NV92 336 aa9.12□□□□□ -0.95
NECTIN3-209ENST00000488016 FLRT1Q9NZU1 646 aa9.12□□□□□ -0.95
NECTIN3-209ENST00000488016 ZNF214Q9UL59 606 aaPredicted RBP9.12□□□□□ -0.95
NECTIN3-209ENST00000488016 ADAMTS5Q9UNA0 930 aa9.12□□□□□ -0.95
NECTIN3-209ENST00000488016 ZNF536O15090 1300 aa9.11□□□□□ -0.95
NECTIN3-209ENST00000488016 IFIT3O14879 490 aaKnown RBP9.11□□□□□ -0.95
NECTIN3-209ENST00000488016 ADCY3O60266 1144 aa9.11□□□□□ -0.95
NECTIN3-209ENST00000488016 PGK2P07205 417 aa9.11□□□□□ -0.95
NECTIN3-209ENST00000488016 PCP11498 1178 aaKnown RBP9.11□□□□□ -0.95
NECTIN3-209ENST00000488016 EN2P19622 333 aaPredicted RBP9.11□□□□□ -0.95
NECTIN3-209ENST00000488016 RXRAP19793 462 aa9.11□□□□□ -0.95
NECTIN3-209ENST00000488016 SLC35G1Q2M3R5 365 aa9.11□□□□□ -0.95
NECTIN3-209ENST00000488016 SNRNP48Q6IEG0 339 aaKnown RBP9.11□□□□□ -0.95
NECTIN3-209ENST00000488016 PLEKHH3Q7Z736 793 aa9.11□□□□□ -0.95
NECTIN3-209ENST00000488016 RALYLQ86SE5 291 aaKnown RBP9.11□□□□□ -0.95
NECTIN3-209ENST00000488016 IQCA1Q86XH1 822 aa9.11□□□□□ -0.95
NECTIN3-209ENST00000488016 SLC9A9Q8IVB4 645 aa9.11□□□□□ -0.95
NECTIN3-209ENST00000488016 CCAR1Q8IX12 1150 aaKnown RBP9.11□□□□□ -0.95
NECTIN3-209ENST00000488016 STAG2Q8N3U4 1231 aa9.11□□□□□ -0.95
NECTIN3-209ENST00000488016 NCOA7Q8NI08 942 aa9.11□□□□□ -0.95
NECTIN3-209ENST00000488016 NPLOC4Q8TAT6 608 aa9.11□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms