RNA–Protein interactions for RNA: ENST00000487311.1

SRRT-212, Transcript of serrate, RNA effector molecule, humanhuman

TSL 2

Gene SRRT, Length 563 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRT-212ENST00000487311 PDCD2LQ9BRP1 358 aa18.86■□□□□ 0.61
SRRT-212ENST00000487311 BCAS3Q9H6U6 928 aa18.86■□□□□ 0.61
SRRT-212ENST00000487311 MAD2L2Q9UI95 211 aa18.86■□□□□ 0.61
SRRT-212ENST00000487311 MYH6P13533 1939 aa18.86■□□□□ 0.61
SRRT-212ENST00000487311 KLRF2D3W0D1 207 aa18.85■□□□□ 0.61
SRRT-212ENST00000487311 F2P00734 622 aa18.85■□□□□ 0.61
SRRT-212ENST00000487311 NT5C2P49902 561 aa18.85■□□□□ 0.61
SRRT-212ENST00000487311 GHRHRQ02643 423 aa18.85■□□□□ 0.61
SRRT-212ENST00000487311 PTK7Q13308 1070 aa18.85■□□□□ 0.61
SRRT-212ENST00000487311 HSDL1Q3SXM5 330 aa18.85■□□□□ 0.61
SRRT-212ENST00000487311 ZBED2Q9BTP6 218 aa18.85■□□□□ 0.61
SRRT-212ENST00000487311 AMNQ9BXJ7 453 aa18.85■□□□□ 0.61
SRRT-212ENST00000487311 KRT23Q9C075 422 aa18.85■□□□□ 0.61
SRRT-212ENST00000487311 SUGCTQ9HAC7 445 aa18.85■□□□□ 0.61
SRRT-212ENST00000487311 LAMA4Q16363 1823 aa18.85■□□□□ 0.61
SRRT-212ENST00000487311 NCOR1O75376 2440 aa18.85■□□□□ 0.61
SRRT-212ENST00000487311 ABHD14A-ACY1A0A1B0GW23 586 aa18.84■□□□□ 0.61
SRRT-212ENST00000487311 PALM3A6NDB9 673 aaPredicted RBP18.84■□□□□ 0.61
SRRT-212ENST00000487311 GJB5O95377 273 aa18.84■□□□□ 0.61
SRRT-212ENST00000487311 HOXD8P13378 290 aaPredicted RBP18.84■□□□□ 0.61
SRRT-212ENST00000487311 CELF3Q5SZQ8 465 aaKnown RBP18.84■□□□□ 0.61
SRRT-212ENST00000487311 IFIT1BQ5T764 474 aaKnown RBP18.84■□□□□ 0.61
SRRT-212ENST00000487311 LIN28BQ6ZN17 250 aaKnown RBP eCLIP18.84■□□□□ 0.61
SRRT-212ENST00000487311 VSIG10LQ86VR7 867 aa18.84■□□□□ 0.61
SRRT-212ENST00000487311 GDPD5Q8WTR4 605 aa18.84■□□□□ 0.61
SRRT-212ENST00000487311 HLA-CQ95604 372 aa18.84■□□□□ 0.61
SRRT-212ENST00000487311 OSBPL7Q9BZF2 842 aa18.84■□□□□ 0.61
SRRT-212ENST00000487311 EPHX3Q9H6B9 360 aa18.84■□□□□ 0.61
SRRT-212ENST00000487311 SENP2Q9HC62 589 aa18.84■□□□□ 0.61
SRRT-212ENST00000487311 MTUS1Q9ULD2 1270 aa18.84■□□□□ 0.61
SRRT-212ENST00000487311 COG5Q9UP83 839 aa18.84■□□□□ 0.61
SRRT-212ENST00000487311 ZBTB5O15062 677 aa18.83■□□□□ 0.6
SRRT-212ENST00000487311 PPFIA4O75335 1185 aa18.83■□□□□ 0.6
SRRT-212ENST00000487311 PGM5Q15124 567 aa18.83■□□□□ 0.6
SRRT-212ENST00000487311 FAM117BQ6P1L5 589 aa18.83■□□□□ 0.6
SRRT-212ENST00000487311 EXOC6Q8TAG9 804 aa18.83■□□□□ 0.6
SRRT-212ENST00000487311 RAD9AQ99638 391 aa18.83■□□□□ 0.6
SRRT-212ENST00000487311 UBAC1Q9BSL1 405 aa18.83■□□□□ 0.6
SRRT-212ENST00000487311 C16orf70Q9BSU1 422 aa18.83■□□□□ 0.6
SRRT-212ENST00000487311 KATNAL1Q9BW62 490 aa18.83■□□□□ 0.6
SRRT-212ENST00000487311 CTNNA3Q9UI47 895 aa18.83■□□□□ 0.6
SRRT-212ENST00000487311 PCDHA1Q9Y5I3 950 aa18.83■□□□□ 0.6
SRRT-212ENST00000487311 HIP1O00291 1037 aa18.82■□□□□ 0.6
SRRT-212ENST00000487311 PARNO95453 639 aaKnown RBP18.82■□□□□ 0.6
SRRT-212ENST00000487311 GGPS1O95749 300 aa18.82■□□□□ 0.6
SRRT-212ENST00000487311 IKBKEQ14164 716 aa18.82■□□□□ 0.6
SRRT-212ENST00000487311 KHSRPQ92945 711 aaKnown RBP eCLIP18.82■□□□□ 0.6
SRRT-212ENST00000487311 SPATA33Q96N06 139 aa18.82■□□□□ 0.6
SRRT-212ENST00000487311 CNNM2Q9H8M5 875 aa18.82■□□□□ 0.6
SRRT-212ENST00000487311 LINC01553A4QN01 128 aa18.81■□□□□ 0.6
SRRT-212ENST00000487311 CYTH3O43739 400 aa18.81■□□□□ 0.6
SRRT-212ENST00000487311 ERVK-21P61565 698 aa18.81■□□□□ 0.6
SRRT-212ENST00000487311 MKRN4PQ13434 485 aaPredicted RBP18.81■□□□□ 0.6
SRRT-212ENST00000487311 AAMPQ13685 434 aa18.81■□□□□ 0.6
SRRT-212ENST00000487311 DBF4BQ8NFT6 615 aa18.81■□□□□ 0.6
SRRT-212ENST00000487311 PIGSQ96S52 555 aa18.81■□□□□ 0.6
SRRT-212ENST00000487311 RIOX1Q9H6W3 641 aa18.81■□□□□ 0.6
SRRT-212ENST00000487311 MAP3K20Q9NYL2 800 aaKnown RBP18.81■□□□□ 0.6
SRRT-212ENST00000487311 TELO2Q9Y4R8 837 aa18.81■□□□□ 0.6
SRRT-212ENST00000487311 BDP1A6H8Y1 2624 aa18.81■□□□□ 0.6
SRRT-212ENST00000487311 BAZ2BQ9UIF8 2168 aaKnown RBP18.81■□□□□ 0.6
SRRT-212ENST00000487311 LGR5O75473 907 aa18.8■□□□□ 0.6
SRRT-212ENST00000487311 UBA1P22314 1058 aaKnown RBP18.8■□□□□ 0.6
SRRT-212ENST00000487311 FCHSD1Q86WN1 690 aa18.8■□□□□ 0.6
SRRT-212ENST00000487311 HOMER1Q86YM7 354 aa18.8■□□□□ 0.6
SRRT-212ENST00000487311 TGS1Q96RS0 853 aaKnown RBP18.8■□□□□ 0.6
SRRT-212ENST00000487311 CD320Q9NPF0 282 aa18.8■□□□□ 0.6
SRRT-212ENST00000487311 LMCD1Q9NZU5 365 aa18.8■□□□□ 0.6
SRRT-212ENST00000487311 TAF6LQ9Y6J9 622 aa18.8■□□□□ 0.6
SRRT-212ENST00000487311 COL4A4P53420 1690 aaPredicted RBP18.79■□□□□ 0.6
SRRT-212ENST00000487311 THPOP40225 353 aa18.79■□□□□ 0.6
SRRT-212ENST00000487311 MRPS9P82933 396 aaKnown RBP18.79■□□□□ 0.6
SRRT-212ENST00000487311 PTH1RQ03431 593 aa18.79■□□□□ 0.6
SRRT-212ENST00000487311 KCNV1Q6PIU1 500 aa18.79■□□□□ 0.6
SRRT-212ENST00000487311 SERINC5Q86VE9 423 aa18.79■□□□□ 0.6
SRRT-212ENST00000487311 C17orf80Q9BSJ5 609 aa18.79■□□□□ 0.6
SRRT-212ENST00000487311 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP18.78■□□□□ 0.6
SRRT-212ENST00000487311 RSPH10B2B2RC85 870 aa18.78■□□□□ 0.6
SRRT-212ENST00000487311 GCOM1H8Y6P7 765 aaPredicted RBP18.78■□□□□ 0.6
SRRT-212ENST00000487311 TREHO43280 583 aa18.78■□□□□ 0.6
SRRT-212ENST00000487311 RSPH10BP0C881 870 aa18.78■□□□□ 0.6
SRRT-212ENST00000487311 POLR2MP0CAP2 368 aa18.78■□□□□ 0.6
SRRT-212ENST00000487311 TGFB3P10600 412 aa18.78■□□□□ 0.6
SRRT-212ENST00000487311 GSPT1P15170 499 aaKnown RBP18.78■□□□□ 0.6
SRRT-212ENST00000487311 PDE4AP27815 886 aa18.78■□□□□ 0.6
SRRT-212ENST00000487311 GRM4Q14833 912 aa18.78■□□□□ 0.6
SRRT-212ENST00000487311 SAMD3Q8N6K7 520 aa18.78■□□□□ 0.6
SRRT-212ENST00000487311 C1QTNF1Q9BXJ1 281 aa18.78■□□□□ 0.6
SRRT-212ENST00000487311 RNPEPQ9H4A4 650 aa18.78■□□□□ 0.6
SRRT-212ENST00000487311 MLXIPQ9HAP2 919 aa18.78■□□□□ 0.6
SRRT-212ENST00000487311 H3BRB1 525 aa18.77■□□□□ 0.6
SRRT-212ENST00000487311 EFCAB14O75071 495 aa18.77■□□□□ 0.6
SRRT-212ENST00000487311 CYP21A2P08686 494 aa18.77■□□□□ 0.6
SRRT-212ENST00000487311 CCND2P30279 289 aa18.77■□□□□ 0.6
SRRT-212ENST00000487311 HOXC8P31273 242 aa18.77■□□□□ 0.6
SRRT-212ENST00000487311 SEMA3FQ13275 785 aa18.77■□□□□ 0.6
SRRT-212ENST00000487311 PLEKHG4Q58EX7 1191 aa18.77■□□□□ 0.6
SRRT-212ENST00000487311 ATP6V0A1Q93050 837 aa18.77■□□□□ 0.6
SRRT-212ENST00000487311 LRFN3Q9BTN0 628 aa18.77■□□□□ 0.6
SRRT-212ENST00000487311 TUT1Q9H6E5 874 aaKnown RBP18.77■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms