RNA–Protein interactions for RNA: ENST00000486845.1

PHF1-208, Transcript of PHD finger protein 1, humanhuman

TSL 5

Gene PHF1, Length 1,099 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF1-208ENST00000486845 SIP14410 1827 aa23.33■■□□□ 1.33
PHF1-208ENST00000486845 IMMTQ16891 758 aaKnown RBP23.33■■□□□ 1.33
PHF1-208ENST00000486845 UBAC1Q9BSL1 405 aa23.33■■□□□ 1.33
PHF1-208ENST00000486845 LRFN3Q9BTN0 628 aa23.33■■□□□ 1.33
PHF1-208ENST00000486845 KRT23Q9C075 422 aa23.33■■□□□ 1.33
PHF1-208ENST00000486845 SUGCTQ9HAC7 445 aa23.33■■□□□ 1.33
PHF1-208ENST00000486845 MAP3K20Q9NYL2 800 aaKnown RBP23.33■■□□□ 1.33
PHF1-208ENST00000486845 EMSYQ7Z589 1322 aa23.33■■□□□ 1.32
PHF1-208ENST00000486845 HIP1O00291 1037 aa23.32■■□□□ 1.32
PHF1-208ENST00000486845 PPFIA4O75335 1185 aa23.32■■□□□ 1.32
PHF1-208ENST00000486845 LGR5O75473 907 aa23.32■■□□□ 1.32
PHF1-208ENST00000486845 TMEM31Q5JXX7 168 aa23.32■■□□□ 1.32
PHF1-208ENST00000486845 MYSM1Q5VVJ2 828 aa23.32■■□□□ 1.32
PHF1-208ENST00000486845 WNT8BQ93098 351 aa23.32■■□□□ 1.32
PHF1-208ENST00000486845 SPATA33Q96N06 139 aa23.32■■□□□ 1.32
PHF1-208ENST00000486845 PDCD2LQ9BRP1 358 aa23.32■■□□□ 1.32
PHF1-208ENST00000486845 DSCC1Q9BVC3 393 aa23.32■■□□□ 1.32
PHF1-208ENST00000486845 CNNM2Q9H8M5 875 aa23.32■■□□□ 1.32
PHF1-208ENST00000486845 CTNNA3Q9UI47 895 aa23.32■■□□□ 1.32
PHF1-208ENST00000486845 HCN4Q9Y3Q4 1203 aa23.32■■□□□ 1.32
PHF1-208ENST00000486845 ARIH1Q9Y4X5 557 aaPredicted RBP23.32■■□□□ 1.32
PHF1-208ENST00000486845 OPLAHO14841 1288 aa23.31■■□□□ 1.32
PHF1-208ENST00000486845 MYCLP12524 364 aaPredicted RBP23.31■■□□□ 1.32
PHF1-208ENST00000486845 ZNF200P98182 395 aaPredicted RBP23.31■■□□□ 1.32
PHF1-208ENST00000486845 MBTPS1Q14703 1052 aa23.31■■□□□ 1.32
PHF1-208ENST00000486845 CELF3Q5SZQ8 465 aaKnown RBP23.31■■□□□ 1.32
PHF1-208ENST00000486845 IFIT1BQ5T764 474 aaKnown RBP23.31■■□□□ 1.32
PHF1-208ENST00000486845 FAM117BQ6P1L5 589 aa23.31■■□□□ 1.32
PHF1-208ENST00000486845 SAMD3Q8N6K7 520 aa23.31■■□□□ 1.32
PHF1-208ENST00000486845 OSBPL3Q9H4L5 887 aa23.31■■□□□ 1.32
PHF1-208ENST00000486845 INSL6Q9Y581 213 aa23.31■■□□□ 1.32
PHF1-208ENST00000486845 RGS20O76081 388 aa23.3■■□□□ 1.32
PHF1-208ENST00000486845 GGPS1O95749 300 aa23.3■■□□□ 1.32
PHF1-208ENST00000486845 AMHP03971 560 aa23.3■■□□□ 1.32
PHF1-208ENST00000486845 STOX1Q6ZVD7 989 aa23.3■■□□□ 1.32
PHF1-208ENST00000486845 PLEKHM2Q8IWE5 1019 aa23.3■■□□□ 1.32
PHF1-208ENST00000486845 SMC5Q8IY18 1101 aa23.3■■□□□ 1.32
PHF1-208ENST00000486845 UBE2ZQ9H832 354 aaPredicted RBP23.3■■□□□ 1.32
PHF1-208ENST00000486845 PCDHA1Q9Y5I3 950 aa23.3■■□□□ 1.32
PHF1-208ENST00000486845 KLRF2D3W0D1 207 aa23.29■■□□□ 1.32
PHF1-208ENST00000486845 ZBTB5O15062 677 aa23.29■■□□□ 1.32
PHF1-208ENST00000486845 TGFB3P10600 412 aa23.29■■□□□ 1.32
PHF1-208ENST00000486845 AAMPQ13685 434 aa23.29■■□□□ 1.32
PHF1-208ENST00000486845 PGM5Q15124 567 aa23.29■■□□□ 1.32
PHF1-208ENST00000486845 HSDL1Q3SXM5 330 aa23.29■■□□□ 1.32
PHF1-208ENST00000486845 B4GALNT3Q6L9W6 998 aa23.29■■□□□ 1.32
PHF1-208ENST00000486845 SERINC5Q86VE9 423 aa23.29■■□□□ 1.32
PHF1-208ENST00000486845 VSIG10LQ86VR7 867 aa23.29■■□□□ 1.32
PHF1-208ENST00000486845 STAG2Q8N3U4 1231 aa23.29■■□□□ 1.32
PHF1-208ENST00000486845 FBXO22Q8NEZ5 403 aa23.29■■□□□ 1.32
PHF1-208ENST00000486845 MTMR8Q96EF0 704 aa23.29■■□□□ 1.32
PHF1-208ENST00000486845 RSPH10B2B2RC85 870 aa23.28■■□□□ 1.32
PHF1-208ENST00000486845 RSPH10BP0C881 870 aa23.28■■□□□ 1.32
PHF1-208ENST00000486845 UBA1P22314 1058 aaKnown RBP23.28■■□□□ 1.32
PHF1-208ENST00000486845 THPOP40225 353 aa23.28■■□□□ 1.32
PHF1-208ENST00000486845 TRAF1Q13077 416 aa23.28■■□□□ 1.32
PHF1-208ENST00000486845 HIC1Q14526 733 aa23.28■■□□□ 1.32
PHF1-208ENST00000486845 LIN28BQ6ZN17 250 aaKnown RBP eCLIP23.28■■□□□ 1.32
PHF1-208ENST00000486845 CHD1LQ86WJ1 897 aa23.28■■□□□ 1.32
PHF1-208ENST00000486845 RWDD1Q9H446 243 aaPredicted RBP23.28■■□□□ 1.32
PHF1-208ENST00000486845 MICAL3Q7RTP6 2002 aa23.28■■□□□ 1.32
PHF1-208ENST00000486845 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP23.27■■□□□ 1.32
PHF1-208ENST00000486845 C17orf102A2RUQ5 167 aa23.27■■□□□ 1.32
PHF1-208ENST00000486845 SORBS3O60504 671 aa23.27■■□□□ 1.32
PHF1-208ENST00000486845 PPP1R11O60927 126 aaPredicted RBP23.27■■□□□ 1.32
PHF1-208ENST00000486845 CCND2P30279 289 aa23.27■■□□□ 1.32
PHF1-208ENST00000486845 HOXA13P31271 388 aaPredicted RBP23.27■■□□□ 1.32
PHF1-208ENST00000486845 DBF4BQ8NFT6 615 aa23.27■■□□□ 1.32
PHF1-208ENST00000486845 C16orf70Q9BSU1 422 aa23.27■■□□□ 1.32
PHF1-208ENST00000486845 MLXIPQ9HAP2 919 aa23.27■■□□□ 1.32
PHF1-208ENST00000486845 GPR37L1O60883 481 aa23.26■■□□□ 1.31
PHF1-208ENST00000486845 HTRA4P83105 476 aaPredicted RBP23.26■■□□□ 1.31
PHF1-208ENST00000486845 MKRN4PQ13434 485 aaPredicted RBP23.26■■□□□ 1.31
PHF1-208ENST00000486845 SEC23AQ15436 765 aa23.26■■□□□ 1.31
PHF1-208ENST00000486845 LEXMQ3ZCV2 418 aa23.26■■□□□ 1.31
PHF1-208ENST00000486845 MYOCDQ8IZQ8 938 aa23.26■■□□□ 1.31
PHF1-208ENST00000486845 IL31RAQ8NI17 732 aa23.26■■□□□ 1.31
PHF1-208ENST00000486845 SP7Q8TDD2 431 aaPredicted RBP23.26■■□□□ 1.31
PHF1-208ENST00000486845 ATP6V0A1Q93050 837 aa23.26■■□□□ 1.31
PHF1-208ENST00000486845 C17orf80Q9BSJ5 609 aa23.26■■□□□ 1.31
PHF1-208ENST00000486845 MAD2L2Q9UI95 211 aa23.26■■□□□ 1.31
PHF1-208ENST00000486845 GCOM1H8Y6P7 765 aaPredicted RBP23.25■■□□□ 1.31
PHF1-208ENST00000486845 POLR2MP0CAP2 368 aa23.25■■□□□ 1.31
PHF1-208ENST00000486845 SP2Q02086 613 aa23.25■■□□□ 1.31
PHF1-208ENST00000486845 PLEKHG4Q58EX7 1191 aa23.25■■□□□ 1.31
PHF1-208ENST00000486845 KHSRPQ92945 711 aaKnown RBP eCLIP23.25■■□□□ 1.31
PHF1-208ENST00000486845 SAMD11Q96NU1 681 aa23.25■■□□□ 1.31
PHF1-208ENST00000486845 PALM3A6NDB9 673 aaPredicted RBP23.24■■□□□ 1.31
PHF1-208ENST00000486845 PI4K2BG5E9Z4 385 aa23.24■■□□□ 1.31
PHF1-208ENST00000486845 H3BRB1 525 aa23.24■■□□□ 1.31
PHF1-208ENST00000486845 CAND2O75155 1236 aa23.24■■□□□ 1.31
PHF1-208ENST00000486845 KCNA5P22460 613 aa23.24■■□□□ 1.31
PHF1-208ENST00000486845 HOXC8P31273 242 aa23.24■■□□□ 1.31
PHF1-208ENST00000486845 NUCB1Q02818 461 aa23.24■■□□□ 1.31
PHF1-208ENST00000486845 PTPROQ16827 1216 aa23.24■■□□□ 1.31
PHF1-208ENST00000486845 HOMER1Q86YM7 354 aa23.24■■□□□ 1.31
PHF1-208ENST00000486845 SEPT8Q92599 483 aa23.24■■□□□ 1.31
PHF1-208ENST00000486845 MRPL38Q96DV4 380 aaKnown RBP23.24■■□□□ 1.31
PHF1-208ENST00000486845 TUT1Q9H6E5 874 aaKnown RBP23.24■■□□□ 1.31
PHF1-208ENST00000486845 CD320Q9NPF0 282 aa23.24■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms