RNA–Protein interactions for RNA: ENST00000486336.1

SNX21-211, Transcript of sorting nexin family member 21, humanhuman

TSL 3

Gene SNX21, Length 701 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX21-211ENST00000486336 UMODL1Q5DID0 1318 aa12.66□□□□□ -0.38
SNX21-211ENST00000486336 RANBP2P49792 3224 aaKnown RBP12.66□□□□□ -0.38
SNX21-211ENST00000486336 SMCO2A6NFE2 343 aa12.66□□□□□ -0.38
SNX21-211ENST00000486336 STAM2O75886 525 aa12.66□□□□□ -0.38
SNX21-211ENST00000486336 ZNF286BP0CG31 522 aa12.66□□□□□ -0.38
SNX21-211ENST00000486336 UBA1P22314 1058 aaKnown RBP12.66□□□□□ -0.38
SNX21-211ENST00000486336 PSEN2P49810 448 aa12.66□□□□□ -0.38
SNX21-211ENST00000486336 ADCY7P51828 1080 aa12.66□□□□□ -0.38
SNX21-211ENST00000486336 RCAN1P53805 252 aa12.66□□□□□ -0.38
SNX21-211ENST00000486336 SP4Q02446 784 aa12.66□□□□□ -0.38
SNX21-211ENST00000486336 MYSM1Q5VVJ2 828 aa12.66□□□□□ -0.38
SNX21-211ENST00000486336 PCNX4Q63HM2 1172 aa12.66□□□□□ -0.38
SNX21-211ENST00000486336 NFRKBQ6P4R8 1299 aa12.66□□□□□ -0.38
SNX21-211ENST00000486336 CYFIP1Q7L576 1253 aa12.66□□□□□ -0.38
SNX21-211ENST00000486336 NLRX1Q86UT6 975 aa12.66□□□□□ -0.38
SNX21-211ENST00000486336 PPTC7Q8NI37 304 aa12.66□□□□□ -0.38
SNX21-211ENST00000486336 EMID1Q96A84 441 aaPredicted RBP12.66□□□□□ -0.38
SNX21-211ENST00000486336 UPF3BQ9BZI7 483 aaKnown RBP12.66□□□□□ -0.38
SNX21-211ENST00000486336 BCAS3Q9H6U6 928 aa12.66□□□□□ -0.38
SNX21-211ENST00000486336 EHMT1Q9H9B1 1298 aa12.66□□□□□ -0.38
SNX21-211ENST00000486336 ZSWIM6Q9HCJ5 1215 aa12.66□□□□□ -0.38
SNX21-211ENST00000486336 FRMPD4Q14CM0 1322 aa12.65□□□□□ -0.38
SNX21-211ENST00000486336 SPATA31C2B4DYI2 1134 aa12.65□□□□□ -0.38
SNX21-211ENST00000486336 STXBP3O00186 592 aa12.65□□□□□ -0.38
SNX21-211ENST00000486336 NOP56O00567 594 aaKnown RBP12.65□□□□□ -0.38
SNX21-211ENST00000486336 FIBPO43427 364 aa12.65□□□□□ -0.38
SNX21-211ENST00000486336 NEDD9Q14511 834 aa12.65□□□□□ -0.38
SNX21-211ENST00000486336 MFSD10Q14728 455 aa12.65□□□□□ -0.38
SNX21-211ENST00000486336 HSDL1Q3SXM5 330 aa12.65□□□□□ -0.38
SNX21-211ENST00000486336 TYW1BQ6NUM6 668 aa12.65□□□□□ -0.38
SNX21-211ENST00000486336 XRRA1Q6P2D8 792 aa12.65□□□□□ -0.38
SNX21-211ENST00000486336 C7orf31Q8N865 590 aa12.65□□□□□ -0.38
SNX21-211ENST00000486336 KAT2BQ92831 832 aa12.65□□□□□ -0.38
SNX21-211ENST00000486336 PHKBQ93100 1093 aa12.65□□□□□ -0.38
SNX21-211ENST00000486336 PGBD1Q96JS3 809 aa12.65□□□□□ -0.38
SNX21-211ENST00000486336 INPP4AQ96PE3 977 aaPredicted RBP12.65□□□□□ -0.38
SNX21-211ENST00000486336 NOC4LQ9BVI4 516 aaKnown RBP12.65□□□□□ -0.38
SNX21-211ENST00000486336 KATNAL1Q9BW62 490 aa12.65□□□□□ -0.38
SNX21-211ENST00000486336 NCOA5Q9HCD5 579 aaKnown RBP12.65□□□□□ -0.38
SNX21-211ENST00000486336 RIC8AQ9NPQ8 531 aa12.65□□□□□ -0.38
SNX21-211ENST00000486336 PDRG1Q9NUG6 133 aa12.65□□□□□ -0.38
SNX21-211ENST00000486336 BARHL2Q9NY43 387 aa12.65□□□□□ -0.38
SNX21-211ENST00000486336 PKD2L1Q9P0L9 805 aa12.65□□□□□ -0.38
SNX21-211ENST00000486336 hCG_1984214I3L0E3 225 aa12.64□□□□□ -0.39
SNX21-211ENST00000486336 PPFIA4O75335 1185 aa12.64□□□□□ -0.39
SNX21-211ENST00000486336 SCG2P13521 617 aa12.64□□□□□ -0.39
SNX21-211ENST00000486336 PDIA3P30101 505 aaKnown RBP12.64□□□□□ -0.39
SNX21-211ENST00000486336 ICAM3P32942 547 aa12.64□□□□□ -0.39
SNX21-211ENST00000486336 PTPN11Q06124 597 aaPredicted RBP12.64□□□□□ -0.39
SNX21-211ENST00000486336 STK3Q13188 491 aa12.64□□□□□ -0.39
SNX21-211ENST00000486336 SEMA3FQ13275 785 aa12.64□□□□□ -0.39
SNX21-211ENST00000486336 TOB2Q14106 344 aaPredicted RBP12.64□□□□□ -0.39
SNX21-211ENST00000486336 PTGISQ16647 500 aa12.64□□□□□ -0.39
SNX21-211ENST00000486336 PFKFB3Q16875 520 aaPredicted RBP12.64□□□□□ -0.39
SNX21-211ENST00000486336 KIAA0753Q2KHM9 967 aa12.64□□□□□ -0.39
SNX21-211ENST00000486336 UTP14CQ5TAP6 766 aaKnown RBP12.64□□□□□ -0.39
SNX21-211ENST00000486336 PPP1R18Q6NYC8 613 aa12.64□□□□□ -0.39
SNX21-211ENST00000486336 ZNF365Q70YC5 407 aa12.64□□□□□ -0.39
SNX21-211ENST00000486336 Q7L0L9 218 aa12.64□□□□□ -0.39
SNX21-211ENST00000486336 FBXL16Q8N461 479 aa12.64□□□□□ -0.39
SNX21-211ENST00000486336 DEFB123Q8N688 67 aa12.64□□□□□ -0.39
SNX21-211ENST00000486336 ZNF713Q8N859 430 aaPredicted RBP12.64□□□□□ -0.39
SNX21-211ENST00000486336 RETREG2Q8NC44 543 aa12.64□□□□□ -0.39
SNX21-211ENST00000486336 SCLYQ96I15 445 aa12.64□□□□□ -0.39
SNX21-211ENST00000486336 BUD13Q9BRD0 619 aaKnown RBP eCLIP12.64□□□□□ -0.39
SNX21-211ENST00000486336 SLC26A6Q9BXS9 759 aa12.64□□□□□ -0.39
SNX21-211ENST00000486336 TM6SF1Q9BZW5 370 aa12.64□□□□□ -0.39
SNX21-211ENST00000486336 IL23AQ9NPF7 189 aa12.64□□□□□ -0.39
SNX21-211ENST00000486336 TMEM260Q9NX78 707 aa12.64□□□□□ -0.39
SNX21-211ENST00000486336 HDAC6Q9UBN7 1215 aa12.64□□□□□ -0.39
SNX21-211ENST00000486336 PRPF3O43395 683 aaKnown RBP12.63□□□□□ -0.39
SNX21-211ENST00000486336 FGBP02675 491 aa12.63□□□□□ -0.39
SNX21-211ENST00000486336 ZNF76P36508 570 aa12.63□□□□□ -0.39
SNX21-211ENST00000486336 TMEM240Q5SV17 173 aa12.63□□□□□ -0.39
SNX21-211ENST00000486336 JAKMIP3Q5VZ66 844 aa12.63□□□□□ -0.39
SNX21-211ENST00000486336 GDF6Q6KF10 455 aaPredicted RBP12.63□□□□□ -0.39
SNX21-211ENST00000486336 C16orf59Q7L2K0 433 aa12.63□□□□□ -0.39
SNX21-211ENST00000486336 DEFB128Q7Z7B8 93 aa12.63□□□□□ -0.39
SNX21-211ENST00000486336 RPUSD2Q8IZ73 545 aaKnown RBP12.63□□□□□ -0.39
SNX21-211ENST00000486336 ANO3Q9BYT9 981 aa12.63□□□□□ -0.39
SNX21-211ENST00000486336 AGXT2Q9BYV1 514 aa12.63□□□□□ -0.39
SNX21-211ENST00000486336 GLT8D2Q9H1C3 349 aa12.63□□□□□ -0.39
SNX21-211ENST00000486336 SCN10AQ9Y5Y9 1956 aa12.63□□□□□ -0.39
SNX21-211ENST00000486336 CPLX1O14810 134 aa12.62□□□□□ -0.39
SNX21-211ENST00000486336 FOSP01100 380 aaPredicted RBP12.62□□□□□ -0.39
SNX21-211ENST00000486336 ITGB5P18084 799 aa12.62□□□□□ -0.39
SNX21-211ENST00000486336 SSRP1Q08945 709 aaKnown RBP12.62□□□□□ -0.39
SNX21-211ENST00000486336 BFSP2Q13515 415 aa12.62□□□□□ -0.39
SNX21-211ENST00000486336 MTMR1Q13613 665 aa12.62□□□□□ -0.39
SNX21-211ENST00000486336 PSRC1Q6PGN9 363 aaPredicted RBP12.62□□□□□ -0.39
SNX21-211ENST00000486336 METTL7BQ6UX53 244 aa12.62□□□□□ -0.39
SNX21-211ENST00000486336 CCDC12Q8WUD4 166 aaPredicted RBP12.62□□□□□ -0.39
SNX21-211ENST00000486336 GPRASP2Q96D09 838 aa12.62□□□□□ -0.39
SNX21-211ENST00000486336 CDHR1Q96JP9 859 aa12.62□□□□□ -0.39
SNX21-211ENST00000486336 FAM161BQ96MY7 647 aa12.62□□□□□ -0.39
SNX21-211ENST00000486336 WNT8AQ9H1J5 351 aa12.62□□□□□ -0.39
SNX21-211ENST00000486336 C6orf50Q9HD87 102 aa12.62□□□□□ -0.39
SNX21-211ENST00000486336 JADE2Q9NQC1 790 aa12.62□□□□□ -0.39
SNX21-211ENST00000486336 UBIAD1Q9Y5Z9 338 aa12.62□□□□□ -0.39
SNX21-211ENST00000486336 HSFX4A0A1B0GTS1 333 aaPredicted RBP12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms