RNA–Protein interactions for RNA: ENST00000485628.2

APOE-205, Transcript of apolipoprotein E, humanhuman

TSL 1 (best)

Gene APOE, Length 771 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOE-205ENST00000485628 ABHD16BQ9H3Z7 469 aa17.97■□□□□ 0.47
APOE-205ENST00000485628 VTA1Q9NP79 307 aa17.97■□□□□ 0.47
APOE-205ENST00000485628 KCNH7Q9NS40 1196 aa17.97■□□□□ 0.47
APOE-205ENST00000485628 DDX25Q9UHL0 483 aaKnown RBP17.97■□□□□ 0.47
APOE-205ENST00000485628 NRBP1Q9UHY1 535 aa17.97■□□□□ 0.47
APOE-205ENST00000485628 LAD1O00515 517 aa17.96■□□□□ 0.47
APOE-205ENST00000485628 BMP15O95972 392 aa17.96■□□□□ 0.47
APOE-205ENST00000485628 TGFB3P10600 412 aa17.96■□□□□ 0.47
APOE-205ENST00000485628 CTCFP49711 727 aaPredicted RBP17.96■□□□□ 0.47
APOE-205ENST00000485628 SETQ01105 290 aaPredicted RBP17.96■□□□□ 0.47
APOE-205ENST00000485628 IL17AQ16552 155 aa17.96■□□□□ 0.47
APOE-205ENST00000485628 PRR16Q569H4 304 aa17.96■□□□□ 0.47
APOE-205ENST00000485628 ARL6IP4Q66PJ3 421 aaKnown RBP17.96■□□□□ 0.47
APOE-205ENST00000485628 PLA2G4DQ86XP0 818 aa17.96■□□□□ 0.47
APOE-205ENST00000485628 POTEDQ86YR6 584 aa17.96■□□□□ 0.47
APOE-205ENST00000485628 SLC5A5Q92911 643 aa17.96■□□□□ 0.47
APOE-205ENST00000485628 SENP7Q9BQF6 1050 aa17.96■□□□□ 0.47
APOE-205ENST00000485628 CFAP45Q9UL16 551 aa17.96■□□□□ 0.47
APOE-205ENST00000485628 FIBPO43427 364 aa17.95■□□□□ 0.46
APOE-205ENST00000485628 NEMFO60524 1076 aa17.95■□□□□ 0.46
APOE-205ENST00000485628 ATP9AO75110 1047 aa17.95■□□□□ 0.46
APOE-205ENST00000485628 PPP6R2O75170 966 aa17.95■□□□□ 0.46
APOE-205ENST00000485628 PSMD10O75832 226 aa17.95■□□□□ 0.46
APOE-205ENST00000485628 BAG4O95429 457 aaKnown RBP17.95■□□□□ 0.46
APOE-205ENST00000485628 KCNA2P16389 499 aa17.95■□□□□ 0.46
APOE-205ENST00000485628 ATP2B1P20020 1258 aa17.95■□□□□ 0.46
APOE-205ENST00000485628 KRT85P78386 507 aa17.95■□□□□ 0.46
APOE-205ENST00000485628 SP2Q02086 613 aa17.95■□□□□ 0.46
APOE-205ENST00000485628 LEO1Q8WVC0 666 aaPredicted RBP17.95■□□□□ 0.46
APOE-205ENST00000485628 AGO4Q9HCK5 861 aaKnown RBP17.95■□□□□ 0.46
APOE-205ENST00000485628 PTPN22Q9Y2R2 807 aa17.95■□□□□ 0.46
APOE-205ENST00000485628 MRVI1Q9Y6F6 885 aa17.95■□□□□ 0.46
APOE-205ENST00000485628 ARIH2O95376 493 aa17.94■□□□□ 0.46
APOE-205ENST00000485628 CYBAP13498 195 aa17.94■□□□□ 0.46
APOE-205ENST00000485628 CYP2C19P33261 490 aa17.94■□□□□ 0.46
APOE-205ENST00000485628 ZNF76P36508 570 aa17.94■□□□□ 0.46
APOE-205ENST00000485628 LBX1P52954 281 aa17.94■□□□□ 0.46
APOE-205ENST00000485628 SPIRE1Q08AE8 756 aa17.94■□□□□ 0.46
APOE-205ENST00000485628 ITGB3BPQ13352 177 aaPredicted RBP17.94■□□□□ 0.46
APOE-205ENST00000485628 MTMR1Q13613 665 aa17.94■□□□□ 0.46
APOE-205ENST00000485628 ACVR2BQ13705 512 aa17.94■□□□□ 0.46
APOE-205ENST00000485628 FOXD4L6Q3SYB3 417 aaPredicted RBP17.94■□□□□ 0.46
APOE-205ENST00000485628 GNPTABQ3T906 1256 aa17.94■□□□□ 0.46
APOE-205ENST00000485628 KCNV1Q6PIU1 500 aa17.94■□□□□ 0.46
APOE-205ENST00000485628 FOXD4L3Q6VB84 417 aaPredicted RBP17.94■□□□□ 0.46
APOE-205ENST00000485628 NLRX1Q86UT6 975 aa17.94■□□□□ 0.46
APOE-205ENST00000485628 TMEM87AQ8NBN3 555 aa17.94■□□□□ 0.46
APOE-205ENST00000485628 TRPV1Q8NER1 839 aa17.94■□□□□ 0.46
APOE-205ENST00000485628 CDHR1Q96JP9 859 aa17.94■□□□□ 0.46
APOE-205ENST00000485628 RIT2Q99578 217 aa17.94■□□□□ 0.46
APOE-205ENST00000485628 SCAND2PQ9GZW5 306 aaPredicted RBP17.94■□□□□ 0.46
APOE-205ENST00000485628 PDGFCQ9NRA1 345 aa17.94■□□□□ 0.46
APOE-205ENST00000485628 DDX41Q9UJV9 622 aaKnown RBP17.94■□□□□ 0.46
APOE-205ENST00000485628 CEP131Q9UPN4 1083 aa17.94■□□□□ 0.46
APOE-205ENST00000485628 CNPY2Q9Y2B0 182 aa17.94■□□□□ 0.46
APOE-205ENST00000485628 TRIM17Q9Y577 477 aa17.94■□□□□ 0.46
APOE-205ENST00000485628 NFASCO94856 1347 aa17.94■□□□□ 0.46
APOE-205ENST00000485628 POTEFA5A3E0 1075 aa17.93■□□□□ 0.46
APOE-205ENST00000485628 ADCY3O60266 1144 aa17.93■□□□□ 0.46
APOE-205ENST00000485628 AXDND1Q5T1B0 1012 aaPredicted RBP17.93■□□□□ 0.46
APOE-205ENST00000485628 FBXO16Q8IX29 292 aaPredicted RBP17.93■□□□□ 0.46
APOE-205ENST00000485628 FBXO2Q9UK22 296 aaPredicted RBP17.93■□□□□ 0.46
APOE-205ENST00000485628 SRPRBQ9Y5M8 271 aaKnown RBP17.93■□□□□ 0.46
APOE-205ENST00000485628 ELP1O95163 1332 aa17.93■□□□□ 0.46
APOE-205ENST00000485628 CENPFP49454 3210 aa17.93■□□□□ 0.46
APOE-205ENST00000485628 IPO5O00410 1097 aaKnown RBP17.92■□□□□ 0.46
APOE-205ENST00000485628 SPTLC2O15270 562 aa17.92■□□□□ 0.46
APOE-205ENST00000485628 ADCY6O43306 1168 aa17.92■□□□□ 0.46
APOE-205ENST00000485628 OR52Z1P0C646 297 aa17.92■□□□□ 0.46
APOE-205ENST00000485628 FXR2P51116 673 aaKnown RBP eCLIP17.92■□□□□ 0.46
APOE-205ENST00000485628 CACNB2Q08289 660 aaPredicted RBP17.92■□□□□ 0.46
APOE-205ENST00000485628 TRIM32Q13049 653 aa17.92■□□□□ 0.46
APOE-205ENST00000485628 CALCRLQ16602 461 aa17.92■□□□□ 0.46
APOE-205ENST00000485628 PRAMEF19Q5SWL8 479 aa17.92■□□□□ 0.46
APOE-205ENST00000485628 IQSEC1Q6DN90 963 aa17.92■□□□□ 0.46
APOE-205ENST00000485628 EEPD1Q7L9B9 569 aa17.92■□□□□ 0.46
APOE-205ENST00000485628 SLFN12Q8IYM2 578 aa17.92■□□□□ 0.46
APOE-205ENST00000485628 IGSF22Q8N9C0 903 aa17.92■□□□□ 0.46
APOE-205ENST00000485628 SLAIN1Q8ND83 568 aa17.92■□□□□ 0.46
APOE-205ENST00000485628 SCFD2Q8WU76 684 aa17.92■□□□□ 0.46
APOE-205ENST00000485628 BCAS3Q9H6U6 928 aa17.92■□□□□ 0.46
APOE-205ENST00000485628 VAV3Q9UKW4 847 aa17.92■□□□□ 0.46
APOE-205ENST00000485628 GNEQ9Y223 722 aaKnown RBP17.92■□□□□ 0.46
APOE-205ENST00000485628 PTCH2Q9Y6C5 1203 aa17.92■□□□□ 0.46
APOE-205ENST00000485628 DOCK5Q9H7D0 1870 aa17.91■□□□□ 0.46
APOE-205ENST00000485628 HMGCRP04035 888 aa17.91■□□□□ 0.46
APOE-205ENST00000485628 ELNP15502 786 aa17.91■□□□□ 0.46
APOE-205ENST00000485628 NKX3-2P78367 333 aa17.91■□□□□ 0.46
APOE-205ENST00000485628 CEBPZQ03701 1054 aaKnown RBP17.91■□□□□ 0.46
APOE-205ENST00000485628 PDIA5Q14554 519 aa17.91■□□□□ 0.46
APOE-205ENST00000485628 TMEM63BQ5T3F8 832 aa17.91■□□□□ 0.46
APOE-205ENST00000485628 MFSD14CQ5VZR4 134 aa17.91■□□□□ 0.46
APOE-205ENST00000485628 SEPT14Q6ZU15 432 aa17.91■□□□□ 0.46
APOE-205ENST00000485628 RAET1EQ8TD07 263 aa17.91■□□□□ 0.46
APOE-205ENST00000485628 KCNG4Q8TDN1 519 aa17.91■□□□□ 0.46
APOE-205ENST00000485628 GJA10Q969M2 543 aa17.91■□□□□ 0.46
APOE-205ENST00000485628 FERMT2Q96AC1 680 aa17.91■□□□□ 0.46
APOE-205ENST00000485628 ZNF577Q9BSK1 485 aa17.91■□□□□ 0.46
APOE-205ENST00000485628 TBC1D22BQ9NU19 505 aa17.91■□□□□ 0.46
APOE-205ENST00000485628 C11orf97A0A1B0GVM6 126 aaPredicted RBP17.9■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms