RNA–Protein interactions for RNA: ENST00000485592.5

SMARCD3-211, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

TSL 3

Gene SMARCD3, Length 820 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-211ENST00000485592 ZSWIM5Q9P217 1185 aa15.99■□□□□ 0.15
SMARCD3-211ENST00000485592 NCOR1O75376 2440 aa15.98■□□□□ 0.15
SMARCD3-211ENST00000485592 LINC01553A4QN01 128 aa15.98■□□□□ 0.15
SMARCD3-211ENST00000485592 LGR5O75473 907 aa15.98■□□□□ 0.15
SMARCD3-211ENST00000485592 MYCLP12524 364 aaPredicted RBP15.98■□□□□ 0.15
SMARCD3-211ENST00000485592 TMEM31Q5JXX7 168 aa15.98■□□□□ 0.15
SMARCD3-211ENST00000485592 IFIT1BQ5T764 474 aaKnown RBP15.98■□□□□ 0.15
SMARCD3-211ENST00000485592 FAM117BQ6P1L5 589 aa15.98■□□□□ 0.15
SMARCD3-211ENST00000485592 SAMD3Q8N6K7 520 aa15.98■□□□□ 0.15
SMARCD3-211ENST00000485592 SPATA33Q96N06 139 aa15.98■□□□□ 0.15
SMARCD3-211ENST00000485592 PDCD2LQ9BRP1 358 aa15.98■□□□□ 0.15
SMARCD3-211ENST00000485592 EPHX3Q9H6B9 360 aa15.98■□□□□ 0.15
SMARCD3-211ENST00000485592 SUGCTQ9HAC7 445 aa15.98■□□□□ 0.15
SMARCD3-211ENST00000485592 CTNNA3Q9UI47 895 aa15.98■□□□□ 0.15
SMARCD3-211ENST00000485592 MICAL3Q7RTP6 2002 aa15.97■□□□□ 0.15
SMARCD3-211ENST00000485592 PPFIA4O75335 1185 aa15.97■□□□□ 0.15
SMARCD3-211ENST00000485592 AMHP03971 560 aa15.97■□□□□ 0.15
SMARCD3-211ENST00000485592 HOXD8P13378 290 aaPredicted RBP15.97■□□□□ 0.15
SMARCD3-211ENST00000485592 GHRHRQ02643 423 aa15.97■□□□□ 0.15
SMARCD3-211ENST00000485592 TCTN1Q2MV58 587 aa15.97■□□□□ 0.15
SMARCD3-211ENST00000485592 TRIM71Q2Q1W2 868 aaKnown RBP15.97■□□□□ 0.15
SMARCD3-211ENST00000485592 CELF3Q5SZQ8 465 aaKnown RBP15.97■□□□□ 0.15
SMARCD3-211ENST00000485592 MYSM1Q5VVJ2 828 aa15.97■□□□□ 0.15
SMARCD3-211ENST00000485592 B4GALNT3Q6L9W6 998 aa15.97■□□□□ 0.15
SMARCD3-211ENST00000485592 LRFN3Q9BTN0 628 aa15.97■□□□□ 0.15
SMARCD3-211ENST00000485592 OSBPL3Q9H4L5 887 aa15.97■□□□□ 0.15
SMARCD3-211ENST00000485592 INSL6Q9Y581 213 aa15.97■□□□□ 0.15
SMARCD3-211ENST00000485592 ZBTB5O15062 677 aa15.96■□□□□ 0.15
SMARCD3-211ENST00000485592 SORBS3O60504 671 aa15.96■□□□□ 0.15
SMARCD3-211ENST00000485592 GGPS1O95749 300 aa15.96■□□□□ 0.15
SMARCD3-211ENST00000485592 THPOP40225 353 aa15.96■□□□□ 0.15
SMARCD3-211ENST00000485592 ZNF200P98182 395 aaPredicted RBP15.96■□□□□ 0.15
SMARCD3-211ENST00000485592 TRAF1Q13077 416 aa15.96■□□□□ 0.15
SMARCD3-211ENST00000485592 AAMPQ13685 434 aa15.96■□□□□ 0.15
SMARCD3-211ENST00000485592 PGM5Q15124 567 aa15.96■□□□□ 0.15
SMARCD3-211ENST00000485592 HSDL1Q3SXM5 330 aa15.96■□□□□ 0.15
SMARCD3-211ENST00000485592 TRAF7Q6Q0C0 670 aa15.96■□□□□ 0.15
SMARCD3-211ENST00000485592 STOX1Q6ZVD7 989 aa15.96■□□□□ 0.15
SMARCD3-211ENST00000485592 SMC5Q8IY18 1101 aa15.96■□□□□ 0.15
SMARCD3-211ENST00000485592 MYOCDQ8IZQ8 938 aa15.96■□□□□ 0.15
SMARCD3-211ENST00000485592 STAG2Q8N3U4 1231 aa15.96■□□□□ 0.15
SMARCD3-211ENST00000485592 FBXO22Q8NEZ5 403 aa15.96■□□□□ 0.15
SMARCD3-211ENST00000485592 WNT8BQ93098 351 aa15.96■□□□□ 0.15
SMARCD3-211ENST00000485592 RWDD1Q9H446 243 aaPredicted RBP15.96■□□□□ 0.15
SMARCD3-211ENST00000485592 UBE2ZQ9H832 354 aaPredicted RBP15.96■□□□□ 0.15
SMARCD3-211ENST00000485592 ARIH1Q9Y4X5 557 aaPredicted RBP15.96■□□□□ 0.15
SMARCD3-211ENST00000485592 PCDHA1Q9Y5I3 950 aa15.96■□□□□ 0.15
SMARCD3-211ENST00000485592 C17orf102A2RUQ5 167 aa15.95■□□□□ 0.14
SMARCD3-211ENST00000485592 RSPH10B2B2RC85 870 aa15.95■□□□□ 0.14
SMARCD3-211ENST00000485592 KLRF2D3W0D1 207 aa15.95■□□□□ 0.14
SMARCD3-211ENST00000485592 OPLAHO14841 1288 aa15.95■□□□□ 0.14
SMARCD3-211ENST00000485592 RSPH10BP0C881 870 aa15.95■□□□□ 0.14
SMARCD3-211ENST00000485592 TGFB3P10600 412 aa15.95■□□□□ 0.14
SMARCD3-211ENST00000485592 UBA1P22314 1058 aaKnown RBP15.95■□□□□ 0.14
SMARCD3-211ENST00000485592 CCND2P30279 289 aa15.95■□□□□ 0.14
SMARCD3-211ENST00000485592 SERINC5Q86VE9 423 aa15.95■□□□□ 0.14
SMARCD3-211ENST00000485592 CHD1LQ86WJ1 897 aa15.95■□□□□ 0.14
SMARCD3-211ENST00000485592 PLEKHM2Q8IWE5 1019 aa15.95■□□□□ 0.14
SMARCD3-211ENST00000485592 DBF4BQ8NFT6 615 aa15.95■□□□□ 0.14
SMARCD3-211ENST00000485592 MLXIPQ9HAP2 919 aa15.95■□□□□ 0.14
SMARCD3-211ENST00000485592 RGS20O76081 388 aa15.94■□□□□ 0.14
SMARCD3-211ENST00000485592 HOXA13P31271 388 aaPredicted RBP15.94■□□□□ 0.14
SMARCD3-211ENST00000485592 MBTPS1Q14703 1052 aa15.94■□□□□ 0.14
SMARCD3-211ENST00000485592 LIN28BQ6ZN17 250 aaKnown RBP eCLIP15.94■□□□□ 0.14
SMARCD3-211ENST00000485592 VSIG10LQ86VR7 867 aa15.94■□□□□ 0.14
SMARCD3-211ENST00000485592 HOMER1Q86YM7 354 aa15.94■□□□□ 0.14
SMARCD3-211ENST00000485592 ATP6V0A1Q93050 837 aa15.94■□□□□ 0.14
SMARCD3-211ENST00000485592 MTMR8Q96EF0 704 aa15.94■□□□□ 0.14
SMARCD3-211ENST00000485592 SAMD11Q96NU1 681 aa15.94■□□□□ 0.14
SMARCD3-211ENST00000485592 MAD2L2Q9UI95 211 aa15.94■□□□□ 0.14
SMARCD3-211ENST00000485592 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP15.93■□□□□ 0.14
SMARCD3-211ENST00000485592 H3BRB1 525 aa15.93■□□□□ 0.14
SMARCD3-211ENST00000485592 GCOM1H8Y6P7 765 aaPredicted RBP15.93■□□□□ 0.14
SMARCD3-211ENST00000485592 NOP56O00567 594 aaKnown RBP15.93■□□□□ 0.14
SMARCD3-211ENST00000485592 GPR37L1O60883 481 aa15.93■□□□□ 0.14
SMARCD3-211ENST00000485592 PPP1R11O60927 126 aaPredicted RBP15.93■□□□□ 0.14
SMARCD3-211ENST00000485592 POLR2MP0CAP2 368 aa15.93■□□□□ 0.14
SMARCD3-211ENST00000485592 KCNA5P22460 613 aa15.93■□□□□ 0.14
SMARCD3-211ENST00000485592 TRDNQ13061 729 aa15.93■□□□□ 0.14
SMARCD3-211ENST00000485592 HIC1Q14526 733 aa15.93■□□□□ 0.14
SMARCD3-211ENST00000485592 PTPROQ16827 1216 aa15.93■□□□□ 0.14
SMARCD3-211ENST00000485592 LEXMQ3ZCV2 418 aa15.93■□□□□ 0.14
SMARCD3-211ENST00000485592 SEPT8Q92599 483 aa15.93■□□□□ 0.14
SMARCD3-211ENST00000485592 C17orf80Q9BSJ5 609 aa15.93■□□□□ 0.14
SMARCD3-211ENST00000485592 C16orf70Q9BSU1 422 aa15.93■□□□□ 0.14
SMARCD3-211ENST00000485592 TUT1Q9H6E5 874 aaKnown RBP15.93■□□□□ 0.14
SMARCD3-211ENST00000485592 CAND2O75155 1236 aa15.92■□□□□ 0.14
SMARCD3-211ENST00000485592 SMIM10L2AP0DMW4 78 aa15.92■□□□□ 0.14
SMARCD3-211ENST00000485592 SMIM10L2BP0DMW5 78 aa15.92■□□□□ 0.14
SMARCD3-211ENST00000485592 HTRA4P83105 476 aaPredicted RBP15.92■□□□□ 0.14
SMARCD3-211ENST00000485592 SP2Q02086 613 aa15.92■□□□□ 0.14
SMARCD3-211ENST00000485592 NUCB1Q02818 461 aa15.92■□□□□ 0.14
SMARCD3-211ENST00000485592 SEC23AQ15436 765 aa15.92■□□□□ 0.14
SMARCD3-211ENST00000485592 GNPTABQ3T906 1256 aa15.92■□□□□ 0.14
SMARCD3-211ENST00000485592 TIGD5Q53EQ6 642 aa15.92■□□□□ 0.14
SMARCD3-211ENST00000485592 PLEKHG4Q58EX7 1191 aa15.92■□□□□ 0.14
SMARCD3-211ENST00000485592 FCHSD1Q86WN1 690 aa15.92■□□□□ 0.14
SMARCD3-211ENST00000485592 IL31RAQ8NI17 732 aa15.92■□□□□ 0.14
SMARCD3-211ENST00000485592 MRPL38Q96DV4 380 aaKnown RBP15.92■□□□□ 0.14
SMARCD3-211ENST00000485592 YME1L1Q96TA2 773 aa15.92■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 289 ms