RNA–Protein interactions for RNA: ENST00000485024.1

VPS8-223, Transcript of VPS8, CORVET complex subunit, humanhuman

TSL 2

Gene VPS8, Length 477 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-223ENST00000485024 CACTINQ8WUQ7 758 aaKnown RBP5.86□□□□□ -1.47
VPS8-223ENST00000485024 EDAQ92838 391 aa5.86□□□□□ -1.47
VPS8-223ENST00000485024 RSRP1Q9BUV0 290 aa5.86□□□□□ -1.47
VPS8-223ENST00000485024 FAM86C2PA6NEL3 165 aa5.85□□□□□ -1.47
VPS8-223ENST00000485024 U2SURPO15042 1029 aaKnown RBP5.85□□□□□ -1.47
VPS8-223ENST00000485024 COL10A1Q03692 680 aa5.85□□□□□ -1.47
VPS8-223ENST00000485024 NFATC3Q12968 1075 aa5.85□□□□□ -1.47
VPS8-223ENST00000485024 ZNF627Q7L945 461 aa5.85□□□□□ -1.47
VPS8-223ENST00000485024 PPFIBP1Q86W92 1011 aa5.85□□□□□ -1.47
VPS8-223ENST00000485024 CPNE8Q86YQ8 564 aa5.85□□□□□ -1.47
VPS8-223ENST00000485024 DCP2Q8IU60 420 aaKnown RBP5.85□□□□□ -1.47
VPS8-223ENST00000485024 FAM126BQ8IXS8 530 aa5.85□□□□□ -1.47
VPS8-223ENST00000485024 HIRIP3Q9BW71 556 aaPredicted RBP5.85□□□□□ -1.47
VPS8-223ENST00000485024 ACBD3Q9H3P7 528 aa5.85□□□□□ -1.47
VPS8-223ENST00000485024 DNAJA1P31689 397 aaKnown RBP5.84□□□□□ -1.47
VPS8-223ENST00000485024 KRTAP10-7P60409 375 aaPredicted RBP5.84□□□□□ -1.47
VPS8-223ENST00000485024 CLCQ05315 142 aa5.84□□□□□ -1.47
VPS8-223ENST00000485024 AGBL4Q5VU57 503 aa5.84□□□□□ -1.47
VPS8-223ENST00000485024 EEF1DP3Q658K8 133 aa5.84□□□□□ -1.47
VPS8-223ENST00000485024 ERMP1Q7Z2K6 904 aa5.84□□□□□ -1.47
VPS8-223ENST00000485024 ZDHHC15Q96MV8 337 aa5.84□□□□□ -1.47
VPS8-223ENST00000485024 MMRN2Q9H8L6 949 aa5.84□□□□□ -1.47
VPS8-223ENST00000485024 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP5.84□□□□□ -1.47
VPS8-223ENST00000485024 ZDHHC9Q9Y397 364 aa5.84□□□□□ -1.47
VPS8-223ENST00000485024 MEIS3P2A8K0S8 358 aa5.83□□□□□ -1.48
VPS8-223ENST00000485024 FUCA1P04066 466 aa5.83□□□□□ -1.48
VPS8-223ENST00000485024 CRKP46108 304 aa5.83□□□□□ -1.48
VPS8-223ENST00000485024 GJA8P48165 433 aa5.83□□□□□ -1.48
VPS8-223ENST00000485024 ZNF394Q53GI3 561 aa5.83□□□□□ -1.48
VPS8-223ENST00000485024 AXDND1Q5T1B0 1012 aaPredicted RBP5.83□□□□□ -1.48
VPS8-223ENST00000485024 FBXL19Q6PCT2 694 aa5.83□□□□□ -1.48
VPS8-223ENST00000485024 PLEKHO2Q8TD55 490 aa5.83□□□□□ -1.48
VPS8-223ENST00000485024 NOL6Q9H6R4 1146 aaKnown RBP5.83□□□□□ -1.48
VPS8-223ENST00000485024 SEC61A2Q9H9S3 476 aa5.83□□□□□ -1.48
VPS8-223ENST00000485024 SF3B6Q9Y3B4 125 aaKnown RBP5.83□□□□□ -1.48
VPS8-223ENST00000485024 ADH4P08319 380 aa5.82□□□□□ -1.48
VPS8-223ENST00000485024 GTF2F1P35269 517 aaKnown RBP eCLIP5.82□□□□□ -1.48
VPS8-223ENST00000485024 RACK1P63244 317 aaKnown RBP5.82□□□□□ -1.48
VPS8-223ENST00000485024 COL9A2Q14055 689 aaPredicted RBP5.82□□□□□ -1.48
VPS8-223ENST00000485024 ANKRD39Q53RE8 183 aa5.82□□□□□ -1.48
VPS8-223ENST00000485024 KIAA0825Q8IV33 1275 aa5.82□□□□□ -1.48
VPS8-223ENST00000485024 IL17DQ8TAD2 202 aa5.82□□□□□ -1.48
VPS8-223ENST00000485024 GPRASP2Q96D09 838 aa5.82□□□□□ -1.48
VPS8-223ENST00000485024 SEC16BQ96JE7 1060 aa5.82□□□□□ -1.48
VPS8-223ENST00000485024 PCDHGB7Q9Y5F8 929 aa5.82□□□□□ -1.48
VPS8-223ENST00000485024 AURKAO14965 403 aa5.81□□□□□ -1.48
VPS8-223ENST00000485024 STK10O94804 968 aaKnown RBP5.81□□□□□ -1.48
VPS8-223ENST00000485024 KRT4P19013 534 aa5.81□□□□□ -1.48
VPS8-223ENST00000485024 COMTP21964 271 aa5.81□□□□□ -1.48
VPS8-223ENST00000485024 GK5Q6ZS86 529 aa5.81□□□□□ -1.48
VPS8-223ENST00000485024 Q6ZSN1 163 aa5.81□□□□□ -1.48
VPS8-223ENST00000485024 C1orf210Q8IVY1 113 aa5.81□□□□□ -1.48
VPS8-223ENST00000485024 RASGRP4Q8TDF6 673 aa5.81□□□□□ -1.48
VPS8-223ENST00000485024 PLEKHG4BQ96PX9 1271 aa5.81□□□□□ -1.48
VPS8-223ENST00000485024 LRRC37BQ96QE4 947 aa5.81□□□□□ -1.48
VPS8-223ENST00000485024 BUD13Q9BRD0 619 aaKnown RBP eCLIP5.81□□□□□ -1.48
VPS8-223ENST00000485024 SPON2Q9BUD6 331 aa5.81□□□□□ -1.48
VPS8-223ENST00000485024 AP5M1Q9H0R1 490 aa5.81□□□□□ -1.48
VPS8-223ENST00000485024 BARX1Q9HBU1 254 aaPredicted RBP5.81□□□□□ -1.48
VPS8-223ENST00000485024 KCNQ5Q9NR82 932 aa5.81□□□□□ -1.48
VPS8-223ENST00000485024 FTSJ1Q9UET6 329 aa5.81□□□□□ -1.48
VPS8-223ENST00000485024 ADAM29Q9UKF5 820 aa5.81□□□□□ -1.48
VPS8-223ENST00000485024 CROTQ9UKG9 612 aa5.81□□□□□ -1.48
VPS8-223ENST00000485024 ZNF451Q9Y4E5 1061 aa5.81□□□□□ -1.48
VPS8-223ENST00000485024 ROBO2Q9HCK4 1378 aa5.8□□□□□ -1.48
VPS8-223ENST00000485024 STXBP3O00186 592 aa5.8□□□□□ -1.48
VPS8-223ENST00000485024 CD247P20963 164 aa5.8□□□□□ -1.48
VPS8-223ENST00000485024 PMS1P54277 932 aaKnown RBP5.8□□□□□ -1.48
VPS8-223ENST00000485024 Q6ZPA2 131 aa5.8□□□□□ -1.48
VPS8-223ENST00000485024 NOP9Q86U38 636 aaKnown RBP5.8□□□□□ -1.48
VPS8-223ENST00000485024 DHRS1Q96LJ7 313 aa5.8□□□□□ -1.48
VPS8-223ENST00000485024 LMF1Q96S06 567 aa5.8□□□□□ -1.48
VPS8-223ENST00000485024 KBTBD4Q9NVX7 518 aa5.8□□□□□ -1.48
VPS8-223ENST00000485024 STRIP2Q9ULQ0 834 aa5.8□□□□□ -1.48
VPS8-223ENST00000485024 C7orf72A4D263 438 aa5.79□□□□□ -1.48
VPS8-223ENST00000485024 ATF4P18848 351 aaPredicted RBP5.79□□□□□ -1.48
VPS8-223ENST00000485024 EIF4A3P38919 411 aaKnown RBP5.79□□□□□ -1.48
VPS8-223ENST00000485024 RBL2Q08999 1139 aa5.79□□□□□ -1.48
VPS8-223ENST00000485024 PAK2Q13177 524 aa5.79□□□□□ -1.48
VPS8-223ENST00000485024 FUKQ8N0W3 1084 aa5.79□□□□□ -1.48
VPS8-223ENST00000485024 GIMAP8Q8ND71 665 aaPredicted RBP5.79□□□□□ -1.48
VPS8-223ENST00000485024 CLIC6Q96NY7 704 aa5.79□□□□□ -1.48
VPS8-223ENST00000485024 SUPT16HQ9Y5B9 1047 aaKnown RBP5.79□□□□□ -1.48
VPS8-223ENST00000485024 GREM1O60565 184 aa5.78□□□□□ -1.48
VPS8-223ENST00000485024 SSBP05455 408 aaKnown RBP eCLIP5.78□□□□□ -1.48
VPS8-223ENST00000485024 COL6A1P12109 1028 aa5.78□□□□□ -1.48
VPS8-223ENST00000485024 ACO1P21399 889 aaKnown RBP5.78□□□□□ -1.48
VPS8-223ENST00000485024 BMP5P22003 454 aa5.78□□□□□ -1.48
VPS8-223ENST00000485024 NKX3-2P78367 333 aa5.78□□□□□ -1.48
VPS8-223ENST00000485024 TUBA3CQ13748 450 aa5.78□□□□□ -1.48
VPS8-223ENST00000485024 NBPF6Q5VWK0 638 aa5.78□□□□□ -1.48
VPS8-223ENST00000485024 TUBA3EQ6PEY2 450 aa5.78□□□□□ -1.48
VPS8-223ENST00000485024 DPH6Q7L8W6 267 aa5.78□□□□□ -1.48
VPS8-223ENST00000485024 NUDT10Q8NFP7 164 aa5.78□□□□□ -1.48
VPS8-223ENST00000485024 ZNF483Q8TF39 744 aaPredicted RBP5.78□□□□□ -1.48
VPS8-223ENST00000485024 NUDT11Q96G61 164 aa5.78□□□□□ -1.48
VPS8-223ENST00000485024 NBPF4Q96M43 638 aa5.78□□□□□ -1.48
VPS8-223ENST00000485024 NT5C1AQ9BXI3 368 aa5.78□□□□□ -1.48
VPS8-223ENST00000485024 WASF3Q9UPY6 502 aa5.78□□□□□ -1.48
VPS8-223ENST00000485024 SLC4A7Q9Y6M7 1214 aa5.78□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms