RNA–Protein interactions for RNA: ENST00000484194.1

HLA-E-202, Transcript of major histocompatibility complex, class I, E, humanhuman

Gene HLA-E, Length 726 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-E-202ENST00000484194 SGMS1Q86VZ5 419 aa29.33■■■□□ 2.29
HLA-E-202ENST00000484194 SRBD1Q8N5C6 995 aaKnown RBP29.33■■■□□ 2.29
HLA-E-202ENST00000484194 AFAP1L1Q8TED9 768 aa29.33■■■□□ 2.29
HLA-E-202ENST00000484194 NEK1Q96PY6 1258 aa29.33■■■□□ 2.29
HLA-E-202ENST00000484194 GTF2IRD1Q9UHL9 959 aa29.33■■■□□ 2.29
HLA-E-202ENST00000484194 TANC1Q9C0D5 1861 aa29.32■■■□□ 2.28
HLA-E-202ENST00000484194 PARNO95453 639 aaKnown RBP29.32■■■□□ 2.28
HLA-E-202ENST00000484194 GRIN2CQ14957 1233 aa29.32■■■□□ 2.28
HLA-E-202ENST00000484194 KIAA0753Q2KHM9 967 aa29.32■■■□□ 2.28
HLA-E-202ENST00000484194 GDF6Q6KF10 455 aaPredicted RBP29.32■■■□□ 2.28
HLA-E-202ENST00000484194 FANCBQ8NB91 859 aa29.32■■■□□ 2.28
HLA-E-202ENST00000484194 INPP4AQ96PE3 977 aaPredicted RBP29.32■■■□□ 2.28
HLA-E-202ENST00000484194 ALG1Q9BT22 464 aa29.32■■■□□ 2.28
HLA-E-202ENST00000484194 HAS3O00219 553 aa29.31■■■□□ 2.28
HLA-E-202ENST00000484194 ZNF286BP0CG31 522 aa29.31■■■□□ 2.28
HLA-E-202ENST00000484194 NEDD9Q14511 834 aa29.31■■■□□ 2.28
HLA-E-202ENST00000484194 KRT32Q14532 448 aa29.31■■■□□ 2.28
HLA-E-202ENST00000484194 HSDL1Q3SXM5 330 aa29.31■■■□□ 2.28
HLA-E-202ENST00000484194 PHF6Q8IWS0 365 aaKnown RBP eCLIP29.31■■■□□ 2.28
HLA-E-202ENST00000484194 FTOQ9C0B1 505 aaKnown RBP eCLIP29.31■■■□□ 2.28
HLA-E-202ENST00000484194 SLC28A3Q9HAS3 691 aa29.31■■■□□ 2.28
HLA-E-202ENST00000484194 HDAC6Q9UBN7 1215 aa29.31■■■□□ 2.28
HLA-E-202ENST00000484194 FIBPO43427 364 aa29.3■■■□□ 2.28
HLA-E-202ENST00000484194 ATP2A2P16615 1042 aaKnown RBP29.3■■■□□ 2.28
HLA-E-202ENST00000484194 RXRAP19793 462 aa29.3■■■□□ 2.28
HLA-E-202ENST00000484194 ICAM3P32942 547 aa29.3■■■□□ 2.28
HLA-E-202ENST00000484194 SP2Q02086 613 aa29.3■■■□□ 2.28
HLA-E-202ENST00000484194 PCNX4Q63HM2 1172 aa29.3■■■□□ 2.28
HLA-E-202ENST00000484194 SKAP1Q86WV1 359 aa29.3■■■□□ 2.28
HLA-E-202ENST00000484194 LRRC2Q9BYS8 371 aa29.3■■■□□ 2.28
HLA-E-202ENST00000484194 PSTPIP2Q9H939 334 aa29.3■■■□□ 2.28
HLA-E-202ENST00000484194 DLL1O00548 723 aa29.29■■■□□ 2.28
HLA-E-202ENST00000484194 NOP56O00567 594 aaKnown RBP29.29■■■□□ 2.28
HLA-E-202ENST00000484194 MRPS9P82933 396 aaKnown RBP29.29■■■□□ 2.28
HLA-E-202ENST00000484194 TSGA10IPQ3SY00 556 aa29.29■■■□□ 2.28
HLA-E-202ENST00000484194 USP17L6PQ6QN14 398 aa29.29■■■□□ 2.28
HLA-E-202ENST00000484194 TMTC3Q6ZXV5 915 aa29.29■■■□□ 2.28
HLA-E-202ENST00000484194 MICU3Q86XE3 530 aa29.29■■■□□ 2.28
HLA-E-202ENST00000484194 VWCEQ96DN2 955 aa29.29■■■□□ 2.28
HLA-E-202ENST00000484194 GAS2L1Q99501 681 aaPredicted RBP29.29■■■□□ 2.28
HLA-E-202ENST00000484194 RBM28Q9NW13 759 aaKnown RBP29.29■■■□□ 2.28
HLA-E-202ENST00000484194 PCDHA11Q9Y5I1 949 aa29.29■■■□□ 2.28
HLA-E-202ENST00000484194 SCN5AQ14524 2016 aa29.28■■■□□ 2.28
HLA-E-202ENST00000484194 SPATA31C2B4DYI2 1134 aa29.28■■■□□ 2.28
HLA-E-202ENST00000484194 MEIS2O14770 477 aa29.28■■■□□ 2.28
HLA-E-202ENST00000484194 SELPP16109 830 aa29.28■■■□□ 2.28
HLA-E-202ENST00000484194 RBL2Q08999 1139 aa29.28■■■□□ 2.28
HLA-E-202ENST00000484194 PTK7Q13308 1070 aa29.28■■■□□ 2.28
HLA-E-202ENST00000484194 DHX32Q7L7V1 743 aaKnown RBP29.28■■■□□ 2.28
HLA-E-202ENST00000484194 NLRX1Q86UT6 975 aa29.28■■■□□ 2.28
HLA-E-202ENST00000484194 CCDC136Q96JN2 1154 aa29.28■■■□□ 2.28
HLA-E-202ENST00000484194 ZFP91Q96JP5 570 aaPredicted RBP29.28■■■□□ 2.28
HLA-E-202ENST00000484194 SORBS3O60504 671 aa29.27■■■□□ 2.28
HLA-E-202ENST00000484194 HMGB1P09429 215 aaKnown RBP29.27■■■□□ 2.28
HLA-E-202ENST00000484194 COL9A3Q14050 684 aaPredicted RBP29.27■■■□□ 2.28
HLA-E-202ENST00000484194 METTL7BQ6UX53 244 aa29.27■■■□□ 2.28
HLA-E-202ENST00000484194 LRRC8DQ7L1W4 858 aa29.27■■■□□ 2.28
HLA-E-202ENST00000484194 CMTR1Q8N1G2 835 aaKnown RBP29.27■■■□□ 2.28
HLA-E-202ENST00000484194 GPKOWQ92917 476 aaPredicted RBP eCLIP29.27■■■□□ 2.28
HLA-E-202ENST00000484194 CTAGE1Q96RT6 745 aa29.27■■■□□ 2.28
HLA-E-202ENST00000484194 SLC9A7Q96T83 725 aa29.27■■■□□ 2.28
HLA-E-202ENST00000484194 BAIAP3O94812 1187 aa29.26■■■□□ 2.27
HLA-E-202ENST00000484194 APOA5Q6Q788 366 aa29.26■■■□□ 2.27
HLA-E-202ENST00000484194 CCDC82Q8N4S0 544 aa29.26■■■□□ 2.27
HLA-E-202ENST00000484194 GIMAP8Q8ND71 665 aaPredicted RBP29.26■■■□□ 2.27
HLA-E-202ENST00000484194 PHOSPHO2Q8TCD6 241 aa29.26■■■□□ 2.27
HLA-E-202ENST00000484194 USP26Q9BXU7 913 aa29.26■■■□□ 2.27
HLA-E-202ENST00000484194 NKX2-4Q9H2Z4 354 aa29.26■■■□□ 2.27
HLA-E-202ENST00000484194 RTEL1Q9NZ71 1219 aa29.26■■■□□ 2.27
HLA-E-202ENST00000484194 TRIP12Q14669 1992 aaPredicted RBP29.25■■■□□ 2.27
HLA-E-202ENST00000484194 RAB11FIP4Q86YS3 637 aa29.25■■■□□ 2.27
HLA-E-202ENST00000484194 CDHR1Q96JP9 859 aa29.25■■■□□ 2.27
HLA-E-202ENST00000484194 SENP7Q9BQF6 1050 aa29.25■■■□□ 2.27
HLA-E-202ENST00000484194 C16orf70Q9BSU1 422 aa29.25■■■□□ 2.27
HLA-E-202ENST00000484194 GBF1Q92538 1859 aa29.25■■■□□ 2.27
HLA-E-202ENST00000484194 H3BRB1 525 aa29.24■■■□□ 2.27
HLA-E-202ENST00000484194 CKBP12277 381 aa29.24■■■□□ 2.27
HLA-E-202ENST00000484194 EXOSC10Q01780 885 aaKnown RBP29.24■■■□□ 2.27
HLA-E-202ENST00000484194 HEATR3Q7Z4Q2 680 aa29.24■■■□□ 2.27
HLA-E-202ENST00000484194 TEX2Q8IWB9 1127 aa29.24■■■□□ 2.27
HLA-E-202ENST00000484194 DHX38Q92620 1227 aaKnown RBP29.24■■■□□ 2.27
HLA-E-202ENST00000484194 TUT1Q9H6E5 874 aaKnown RBP29.24■■■□□ 2.27
HLA-E-202ENST00000484194 EHMT1Q9H9B1 1298 aa29.24■■■□□ 2.27
HLA-E-202ENST00000484194 YBX2Q9Y2T7 364 aaKnown RBP29.24■■■□□ 2.27
HLA-E-202ENST00000484194 SPDYE3A6NKU9 549 aa29.23■■■□□ 2.27
HLA-E-202ENST00000484194 ZBTB43O43298 467 aa29.23■■■□□ 2.27
HLA-E-202ENST00000484194 LGALS2P05162 132 aa29.23■■■□□ 2.27
HLA-E-202ENST00000484194 RABGGTBP53611 331 aa29.23■■■□□ 2.27
HLA-E-202ENST00000484194 CYFIP1Q7L576 1253 aa29.23■■■□□ 2.27
HLA-E-202ENST00000484194 GPRASP2Q96D09 838 aa29.23■■■□□ 2.27
HLA-E-202ENST00000484194 PRDM12Q9H4Q4 367 aa29.23■■■□□ 2.27
HLA-E-202ENST00000484194 KCNJ6P48051 423 aa29.22■■■□□ 2.27
HLA-E-202ENST00000484194 FGD1P98174 961 aa29.22■■■□□ 2.27
HLA-E-202ENST00000484194 RTN1Q16799 776 aa29.22■■■□□ 2.27
HLA-E-202ENST00000484194 PPP2R2DQ66LE6 453 aa29.22■■■□□ 2.27
HLA-E-202ENST00000484194 ZNF215Q9UL58 517 aaPredicted RBP29.22■■■□□ 2.27
HLA-E-202ENST00000484194 hCG_1642624A0A1W2PR95 340 aa29.21■■■□□ 2.27
HLA-E-202ENST00000484194 C17orf102A2RUQ5 167 aa29.21■■■□□ 2.27
HLA-E-202ENST00000484194 KIF28PB7ZC32 967 aa29.21■■■□□ 2.27
HLA-E-202ENST00000484194 RCAN1P53805 252 aa29.21■■■□□ 2.27
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms