RNA–Protein interactions for RNA: ENST00000483851.6

SHOX2-204, Transcript of short stature homeobox 2, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SHOX2, Length 1,866 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2-204ENST00000483851 XRRA1Q6P2D8 792 aa29.39■■■□□ 2.3
SHOX2-204ENST00000483851 RNF207Q6ZRF8 634 aa29.39■■■□□ 2.3
SHOX2-204ENST00000483851 MB21D1Q8N884 522 aa29.39■■■□□ 2.3
SHOX2-204ENST00000483851 CYP2W1Q8TAV3 490 aa29.39■■■□□ 2.3
SHOX2-204ENST00000483851 MXRA8Q9BRK3 442 aa29.39■■■□□ 2.3
SHOX2-204ENST00000483851 HSD3B7Q9H2F3 369 aa29.39■■■□□ 2.3
SHOX2-204ENST00000483851 COL20A1Q9P218 1284 aa29.39■■■□□ 2.3
SHOX2-204ENST00000483851 VAV3Q9UKW4 847 aa29.39■■■□□ 2.3
SHOX2-204ENST00000483851 KCNH4Q9UQ05 1017 aa29.39■■■□□ 2.3
SHOX2-204ENST00000483851 PPP1R2P41236 205 aa29.38■■■□□ 2.29
SHOX2-204ENST00000483851 PPIL2Q13356 520 aa29.38■■■□□ 2.29
SHOX2-204ENST00000483851 SNRNP48Q6IEG0 339 aaKnown RBP29.38■■■□□ 2.29
SHOX2-204ENST00000483851 GJA10Q969M2 543 aa29.38■■■□□ 2.29
SHOX2-204ENST00000483851 WNK4Q96J92 1243 aa29.38■■■□□ 2.29
SHOX2-204ENST00000483851 PVALEFA0A1B0GWK0 134 aa29.38■■■□□ 2.29
SHOX2-204ENST00000483851 RPA1P27694 616 aa29.38■■■□□ 2.29
SHOX2-204ENST00000483851 ELP3Q9H9T3 547 aa29.38■■■□□ 2.29
SHOX2-204ENST00000483851 HOMER2Q9NSB8 354 aa29.38■■■□□ 2.29
SHOX2-204ENST00000483851 PPP2R5CQ13362 524 aa29.37■■■□□ 2.29
SHOX2-204ENST00000483851 TTLL12Q14166 644 aaPredicted RBP29.37■■■□□ 2.29
SHOX2-204ENST00000483851 TMEM132BQ14DG7 1078 aa29.37■■■□□ 2.29
SHOX2-204ENST00000483851 KMT5BQ4FZB7 885 aa29.37■■■□□ 2.29
SHOX2-204ENST00000483851 KIAA1524Q8TCG1 905 aa29.37■■■□□ 2.29
SHOX2-204ENST00000483851 WDR11Q9BZH6 1224 aa29.37■■■□□ 2.29
SHOX2-204ENST00000483851 PSMD10O75832 226 aa29.36■■■□□ 2.29
SHOX2-204ENST00000483851 FMR1Q06787 632 aaKnown RBP eCLIP29.36■■■□□ 2.29
SHOX2-204ENST00000483851 NOLC1Q14978 699 aaKnown RBP eCLIP29.36■■■□□ 2.29
SHOX2-204ENST00000483851 POLR3CQ9BUI4 534 aaPredicted RBP29.36■■■□□ 2.29
SHOX2-204ENST00000483851 IRF6O14896 467 aa29.36■■■□□ 2.29
SHOX2-204ENST00000483851 CD44P16070 742 aaKnown RBP29.36■■■□□ 2.29
SHOX2-204ENST00000483851 SPATA1Q5VX52 437 aa29.36■■■□□ 2.29
SHOX2-204ENST00000483851 GIMAP8Q8ND71 665 aaPredicted RBP29.36■■■□□ 2.29
SHOX2-204ENST00000483851 RIT2Q99578 217 aa29.36■■■□□ 2.29
SHOX2-204ENST00000483851 NFE2L3Q9Y4A8 694 aa29.36■■■□□ 2.29
SHOX2-204ENST00000483851 A0A0G2JMZ2 1700 aa29.35■■■□□ 2.29
SHOX2-204ENST00000483851 MUTP22033 750 aa29.35■■■□□ 2.29
SHOX2-204ENST00000483851 STAT3P40763 770 aa29.35■■■□□ 2.29
SHOX2-204ENST00000483851 MCM6Q14566 821 aa29.35■■■□□ 2.29
SHOX2-204ENST00000483851 COBLL1Q53SF7 1204 aa29.35■■■□□ 2.29
SHOX2-204ENST00000483851 LDLRAD1Q5T700 205 aa29.35■■■□□ 2.29
SHOX2-204ENST00000483851 LRCH2Q5VUJ6 765 aa29.35■■■□□ 2.29
SHOX2-204ENST00000483851 LBX2Q6XYB7 198 aa29.35■■■□□ 2.29
SHOX2-204ENST00000483851 OTOP1Q7RTM1 612 aa29.35■■■□□ 2.29
SHOX2-204ENST00000483851 OTUD5Q96G74 571 aa29.35■■■□□ 2.29
SHOX2-204ENST00000483851 FANCLQ9NW38 375 aa29.35■■■□□ 2.29
SHOX2-204ENST00000483851 RWDD2AQ9UIY3 292 aa29.35■■■□□ 2.29
SHOX2-204ENST00000483851 RIPK3Q9Y572 518 aa29.35■■■□□ 2.29
SHOX2-204ENST00000483851 UBIAD1Q9Y5Z9 338 aa29.35■■■□□ 2.29
SHOX2-204ENST00000483851 ASIC1P78348 528 aa29.34■■■□□ 2.29
SHOX2-204ENST00000483851 STIM1Q13586 685 aa29.34■■■□□ 2.29
SHOX2-204ENST00000483851 ECM1Q16610 540 aa29.34■■■□□ 2.29
SHOX2-204ENST00000483851 NCAPH2Q6IBW4 605 aa29.34■■■□□ 2.29
SHOX2-204ENST00000483851 ACAD9Q9H845 621 aa29.34■■■□□ 2.29
SHOX2-204ENST00000483851 EXOC1Q9NV70 894 aa29.34■■■□□ 2.29
SHOX2-204ENST00000483851 KIAA1024Q9UPX6 916 aa29.34■■■□□ 2.29
SHOX2-204ENST00000483851 ZNF18P17022 549 aa29.34■■■□□ 2.29
SHOX2-204ENST00000483851 PTGS1P23219 599 aa29.34■■■□□ 2.29
SHOX2-204ENST00000483851 UBXN2AP68543 259 aa29.34■■■□□ 2.29
SHOX2-204ENST00000483851 UNC13DQ70J99 1090 aa29.34■■■□□ 2.29
SHOX2-204ENST00000483851 CHST13Q8NET6 341 aa29.34■■■□□ 2.29
SHOX2-204ENST00000483851 CNKSR2Q8WXI2 1034 aa29.34■■■□□ 2.29
SHOX2-204ENST00000483851 CLMNQ96JQ2 1002 aa29.34■■■□□ 2.29
SHOX2-204ENST00000483851 ZNF577Q9BSK1 485 aa29.34■■■□□ 2.29
SHOX2-204ENST00000483851 BMP2KQ9NSY1 1161 aaPredicted RBP29.34■■■□□ 2.29
SHOX2-204ENST00000483851 PYCARDQ9ULZ3 195 aa29.34■■■□□ 2.29
SHOX2-204ENST00000483851 SYNRGQ9UMZ2 1314 aa29.33■■■□□ 2.29
SHOX2-204ENST00000483851 CBFA2T2O43439 604 aa29.33■■■□□ 2.29
SHOX2-204ENST00000483851 TPM2P07951 284 aa29.33■■■□□ 2.29
SHOX2-204ENST00000483851 FANCCQ00597 558 aa29.33■■■□□ 2.29
SHOX2-204ENST00000483851 TREML2Q5T2D2 321 aa29.33■■■□□ 2.29
SHOX2-204ENST00000483851 NSMFQ6X4W1 530 aa29.33■■■□□ 2.29
SHOX2-204ENST00000483851 SLC30A10Q6XR72 485 aa29.33■■■□□ 2.29
SHOX2-204ENST00000483851 KCNK18Q7Z418 384 aa29.33■■■□□ 2.29
SHOX2-204ENST00000483851 CATSPER3Q86XQ3 398 aa29.33■■■□□ 2.29
SHOX2-204ENST00000483851 TAAR1Q96RJ0 339 aa29.33■■■□□ 2.29
SHOX2-204ENST00000483851 MED15Q96RN5 788 aa29.33■■■□□ 2.29
SHOX2-204ENST00000483851 RMDN3Q96TC7 470 aa29.33■■■□□ 2.29
SHOX2-204ENST00000483851 PXMP2Q9NR77 195 aa29.33■■■□□ 2.29
SHOX2-204ENST00000483851 MYMKA6NI61 221 aa29.32■■■□□ 2.28
SHOX2-204ENST00000483851 GAS7O60861 476 aa29.32■■■□□ 2.28
SHOX2-204ENST00000483851 MED24O75448 989 aa29.32■■■□□ 2.28
SHOX2-204ENST00000483851 PGM5Q15124 567 aa29.32■■■□□ 2.28
SHOX2-204ENST00000483851 CCDC186Q7Z3E2 898 aa29.32■■■□□ 2.28
SHOX2-204ENST00000483851 ADSSL1Q8N142 457 aa29.32■■■□□ 2.28
SHOX2-204ENST00000483851 TUFT1Q9NNX1 390 aa29.32■■■□□ 2.28
SHOX2-204ENST00000483851 JADE2Q9NQC1 790 aa29.32■■■□□ 2.28
SHOX2-204ENST00000483851 ITGB5P18084 799 aa29.31■■■□□ 2.28
SHOX2-204ENST00000483851 PAK1Q13153 545 aa29.31■■■□□ 2.28
SHOX2-204ENST00000483851 FASTKD5Q7L8L6 764 aaKnown RBP29.31■■■□□ 2.28
SHOX2-204ENST00000483851 DRC7Q8IY82 874 aa29.31■■■□□ 2.28
SHOX2-204ENST00000483851 PDCD2LQ9BRP1 358 aa29.31■■■□□ 2.28
SHOX2-204ENST00000483851 POTEB3A0JP26 581 aa29.31■■■□□ 2.28
SHOX2-204ENST00000483851 IPO5O00410 1097 aaKnown RBP29.31■■■□□ 2.28
SHOX2-204ENST00000483851 SPATA31C1P0DKV0 1188 aa29.31■■■□□ 2.28
SHOX2-204ENST00000483851 PDE4DQ08499 809 aa29.31■■■□□ 2.28
SHOX2-204ENST00000483851 PSMD2Q13200 908 aa29.31■■■□□ 2.28
SHOX2-204ENST00000483851 BAATQ14032 418 aaPredicted RBP29.31■■■□□ 2.28
SHOX2-204ENST00000483851 POTEBQ6S5H4 581 aa29.31■■■□□ 2.28
SHOX2-204ENST00000483851 B3GNT9Q6UX72 402 aa29.31■■■□□ 2.28
SHOX2-204ENST00000483851 GADL1Q6ZQY3 521 aa29.31■■■□□ 2.28
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms